RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 RAB3GAP1Q15042 981 aa5.55□□□□□ -1.52
NF1-213ENST00000489712 VHLLQ6RSH7 139 aa5.55□□□□□ -1.52
NF1-213ENST00000489712 TMC6Q7Z403 805 aa5.55□□□□□ -1.52
NF1-213ENST00000489712 ADAT2Q7Z6V5 191 aaKnown RBP5.55□□□□□ -1.52
NF1-213ENST00000489712 KLHL6Q8WZ60 621 aa5.55□□□□□ -1.52
NF1-213ENST00000489712 PTCHD1Q96NR3 888 aa5.55□□□□□ -1.52
NF1-213ENST00000489712 FCRL3Q96P31 734 aaPredicted RBP5.55□□□□□ -1.52
NF1-213ENST00000489712 STXBP3O00186 592 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 N4BP3O15049 544 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 NAT2P11245 290 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 ERCC5P28715 1186 aaPredicted RBP5.54□□□□□ -1.52
NF1-213ENST00000489712 CORO7P57737 925 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 GRB10Q13322 594 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 ZNF385BQ569K4 471 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 EEF1DP3Q658K8 133 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 RCSD1Q6JBY9 416 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 ANAPC16Q96DE5 110 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 SIGLEC10Q96LC7 697 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 FGD4Q96M96 766 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 IRF2BPLQ9H1B7 796 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 CAPN10Q9HC96 672 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 KLHL14Q9P2G3 628 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 CGGBP1Q9UFW8 167 aaPredicted RBP5.54□□□□□ -1.52
NF1-213ENST00000489712 SUGT1Q9Y2Z0 365 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 IRAK3Q9Y616 596 aa5.54□□□□□ -1.52
NF1-213ENST00000489712 A0A1W2PQJ5 194 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 ANKRD34BA5PLL1 514 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 AURKAO14965 403 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 SRGAP3O43295 1099 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 ATF4P18848 351 aaPredicted RBP5.53□□□□□ -1.52
NF1-213ENST00000489712 L1CAMP32004 1257 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 EPHB3P54753 998 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 AMPD2Q01433 879 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 MVKQ03426 396 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 NR1I3Q14994 352 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 PLEKHN1Q494U1 663 aaPredicted RBP5.53□□□□□ -1.52
NF1-213ENST00000489712 KIAA1211LQ6NV74 962 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 RPTNQ6XPR3 784 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 AMIGO3Q86WK7 504 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 FAM169BQ8N8A8 192 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 CNTD2Q9H8S5 307 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 PDLIM7Q9NR12 457 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 KCTD3Q9Y597 815 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 BACE2Q9Y5Z0 518 aa5.53□□□□□ -1.52
NF1-213ENST00000489712 MSL3P1P0C860 447 aa5.52□□□□□ -1.53
NF1-213ENST00000489712 TCF3P15923 654 aa5.52□□□□□ -1.53
NF1-213ENST00000489712 PI3P19957 117 aa5.52□□□□□ -1.53
NF1-213ENST00000489712 CDR1P51861 262 aa5.52□□□□□ -1.53
NF1-213ENST00000489712 RBM10P98175 930 aaKnown RBP5.52□□□□□ -1.53
NF1-213ENST00000489712 GNL2Q13823 731 aaKnown RBP5.52□□□□□ -1.53
NF1-213ENST00000489712 SSPNQ14714 243 aa5.52□□□□□ -1.53
NF1-213ENST00000489712 NCAPHQ15003 741 aa5.52□□□□□ -1.53
NF1-213ENST00000489712 TCERG1LQ5VWI1 586 aa5.52□□□□□ -1.53
NF1-213ENST00000489712 BICRALQ6AI39 1079 aa5.52□□□□□ -1.53
NF1-213ENST00000489712 ZC3H14Q6PJT7 736 aaKnown RBP5.52□□□□□ -1.53
NF1-213ENST00000489712 TMEM151BQ8IW70 566 aa5.52□□□□□ -1.53
NF1-213ENST00000489712 CRACR2BQ8N4Y2 399 aaPredicted RBP5.52□□□□□ -1.53
NF1-213ENST00000489712 RCC1LQ96I51 464 aaKnown RBP5.52□□□□□ -1.53
NF1-213ENST00000489712 TRBV23OR9-2A0A075B6M9 112 aa5.51□□□□□ -1.53
NF1-213ENST00000489712 CYBBP04839 570 aa5.51□□□□□ -1.53
NF1-213ENST00000489712 SSBP05455 408 aaKnown RBP eCLIP5.51□□□□□ -1.53
NF1-213ENST00000489712 DBHP09172 617 aa5.51□□□□□ -1.53
NF1-213ENST00000489712 TACR1P25103 407 aa5.51□□□□□ -1.53
NF1-213ENST00000489712 MAPKAPK2P49137 400 aa5.51□□□□□ -1.53
NF1-213ENST00000489712 SEPHS1P49903 392 aa5.51□□□□□ -1.53
NF1-213ENST00000489712 ZNF143P52747 638 aaPredicted RBP5.51□□□□□ -1.53
NF1-213ENST00000489712 CBX2Q14781 532 aaPredicted RBP5.51□□□□□ -1.53
NF1-213ENST00000489712 DPY19L1Q2PZI1 675 aa5.51□□□□□ -1.53
NF1-213ENST00000489712 TNNI3KQ59H18 835 aa5.51□□□□□ -1.53
NF1-213ENST00000489712 PAQR3Q6TCH7 311 aa5.51□□□□□ -1.53
NF1-213ENST00000489712 VPS37DQ86XT2 251 aa5.51□□□□□ -1.53
NF1-213ENST00000489712 ARHGEF39Q8N4T4 335 aa5.51□□□□□ -1.53
NF1-213ENST00000489712 MZB1Q8WU39 189 aa5.51□□□□□ -1.53
NF1-213ENST00000489712 MCMBPQ9BTE3 642 aa5.51□□□□□ -1.53
NF1-213ENST00000489712 APEX2Q9UBZ4 518 aa5.51□□□□□ -1.53
NF1-213ENST00000489712 IRS4O14654 1257 aaPredicted RBP5.5□□□□□ -1.53
NF1-213ENST00000489712 POMZP3Q6PJE2 187 aa5.5□□□□□ -1.53
NF1-213ENST00000489712 CABP7Q86V35 215 aa5.5□□□□□ -1.53
NF1-213ENST00000489712 ACTR10Q9NZ32 417 aa5.5□□□□□ -1.53
NF1-213ENST00000489712 SUSD2Q9UGT4 822 aa5.5□□□□□ -1.53
NF1-213ENST00000489712 AKT3Q9Y243 479 aa5.5□□□□□ -1.53
NF1-213ENST00000489712 C2orf71A6NGG8 1288 aa5.49□□□□□ -1.53
NF1-213ENST00000489712 VAMP4O75379 141 aa5.49□□□□□ -1.53
NF1-213ENST00000489712 KCNH1O95259 989 aa5.49□□□□□ -1.53
NF1-213ENST00000489712 ZNF200P98182 395 aaPredicted RBP5.49□□□□□ -1.53
NF1-213ENST00000489712 LCE1DQ5T752 114 aa5.49□□□□□ -1.53
NF1-213ENST00000489712 LDHDQ86WU2 507 aa5.49□□□□□ -1.53
NF1-213ENST00000489712 NLGN2Q8NFZ4 835 aa5.49□□□□□ -1.53
NF1-213ENST00000489712 APBA2Q99767 749 aa5.49□□□□□ -1.53
NF1-213ENST00000489712 RAPGEFL1Q9UHV5 662 aa5.49□□□□□ -1.53
NF1-213ENST00000489712 NOP56O00567 594 aaKnown RBP5.48□□□□□ -1.53
NF1-213ENST00000489712 SMAD7O15105 426 aaKnown RBP5.48□□□□□ -1.53
NF1-213ENST00000489712 PFKLP17858 780 aa5.48□□□□□ -1.53
NF1-213ENST00000489712 PAMP19021 973 aa5.48□□□□□ -1.53
NF1-213ENST00000489712 AFF3P51826 1226 aaKnown RBP5.48□□□□□ -1.53
NF1-213ENST00000489712 IGDCC3Q8IVU1 814 aa5.48□□□□□ -1.53
NF1-213ENST00000489712 ZNF513Q8N8E2 541 aaPredicted RBP5.48□□□□□ -1.53
NF1-213ENST00000489712 BVESQ8NE79 360 aa5.48□□□□□ -1.53
NF1-213ENST00000489712 PPP1R14AQ96A00 147 aa5.48□□□□□ -1.53
NF1-213ENST00000489712 DBR1Q9UK59 544 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 195.5 ms