RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 STK36Q9NRP7 1315 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 NID2Q14112 1375 aa8□□□□□ -1.13
UBR4-214ENST00000486515 VPS37CA5D8V6 355 aaPredicted RBP8□□□□□ -1.13
UBR4-214ENST00000486515 PDHXO00330 501 aa8□□□□□ -1.13
UBR4-214ENST00000486515 MYCP01106 439 aaPredicted RBP8□□□□□ -1.13
UBR4-214ENST00000486515 SCG2P13521 617 aa8□□□□□ -1.13
UBR4-214ENST00000486515 GNA11P29992 359 aa8□□□□□ -1.13
UBR4-214ENST00000486515 HOXA7P31268 230 aaPredicted RBP8□□□□□ -1.13
UBR4-214ENST00000486515 COPB2P35606 906 aa8□□□□□ -1.13
UBR4-214ENST00000486515 COL9A3Q14050 684 aaPredicted RBP8□□□□□ -1.13
UBR4-214ENST00000486515 CDC37Q16543 378 aaPredicted RBP8□□□□□ -1.13
UBR4-214ENST00000486515 TJAP1Q5JTD0 557 aa8□□□□□ -1.13
UBR4-214ENST00000486515 MCTP2Q6DN12 878 aa8□□□□□ -1.13
UBR4-214ENST00000486515 MCTP1Q6DN14 999 aa8□□□□□ -1.13
UBR4-214ENST00000486515 TTBK2Q6IQ55 1244 aa8□□□□□ -1.13
UBR4-214ENST00000486515 CCDC174Q6PII3 467 aa8□□□□□ -1.13
UBR4-214ENST00000486515 BTNL9Q6UXG8 535 aa8□□□□□ -1.13
UBR4-214ENST00000486515 ANKRD23Q86SG2 305 aa8□□□□□ -1.13
UBR4-214ENST00000486515 MCF2L2Q86YR7 1114 aa8□□□□□ -1.13
UBR4-214ENST00000486515 CPXCR1Q8N123 301 aa8□□□□□ -1.13
UBR4-214ENST00000486515 FAM177A1Q8N128 213 aaPredicted RBP8□□□□□ -1.13
UBR4-214ENST00000486515 SRBD1Q8N5C6 995 aaKnown RBP8□□□□□ -1.13
UBR4-214ENST00000486515 NSUN7Q8NE18 718 aaKnown RBP8□□□□□ -1.13
UBR4-214ENST00000486515 MAFAQ8NHW3 353 aaPredicted RBP8□□□□□ -1.13
UBR4-214ENST00000486515 PIGSQ96S52 555 aa8□□□□□ -1.13
UBR4-214ENST00000486515 R3HDMLQ9H3Y0 253 aa8□□□□□ -1.13
UBR4-214ENST00000486515 RIOX1Q9H6W3 641 aa8□□□□□ -1.13
UBR4-214ENST00000486515 C6orf50Q9HD87 102 aa8□□□□□ -1.13
UBR4-214ENST00000486515 ZCCHC17Q9NP64 241 aaKnown RBP8□□□□□ -1.13
UBR4-214ENST00000486515 PPP1R9AQ9ULJ8 1098 aa8□□□□□ -1.13
UBR4-214ENST00000486515 PRR12Q9ULL5 1215 aa8□□□□□ -1.13
UBR4-214ENST00000486515 SLC45A1Q9Y2W3 748 aa8□□□□□ -1.13
UBR4-214ENST00000486515 MRPL11Q9Y3B7 192 aaKnown RBP8□□□□□ -1.13
UBR4-214ENST00000486515 PCDHA1Q9Y5I3 950 aa8□□□□□ -1.13
UBR4-214ENST00000486515 OTOFQ9HC10 1997 aa8□□□□□ -1.13
UBR4-214ENST00000486515 ATAD5Q96QE3 1844 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 POLR2AP24928 1970 aaKnown RBP7.99□□□□□ -1.13
UBR4-214ENST00000486515 JAK2O60674 1132 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 PPFIA3O75145 1194 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 DSG3P32926 999 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 GCLCP48506 637 aaPredicted RBP7.99□□□□□ -1.13
UBR4-214ENST00000486515 MRPL12P52815 198 aaKnown RBP7.99□□□□□ -1.13
UBR4-214ENST00000486515 FOSBP53539 338 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 OAZ1P54368 228 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 TAF1CQ15572 869 aaPredicted RBP7.99□□□□□ -1.13
UBR4-214ENST00000486515 PFKFB3Q16875 520 aaPredicted RBP7.99□□□□□ -1.13
UBR4-214ENST00000486515 USH1GQ495M9 461 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 WDR78Q5VTH9 848 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 GALNT17Q6IS24 598 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 PPP1R18Q6NYC8 613 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 NBPF11Q86T75 865 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 PAGR1Q9BTK6 254 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 EHMT1Q9H9B1 1298 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 JMJD4Q9H9V9 463 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 ZFYVE28Q9HCC9 887 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 SH3GLB2Q9NR46 395 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 CHMP5Q9NZZ3 219 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 FBXO40Q9UH90 709 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 CCPG1Q9ULG6 757 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 IVNS1ABPQ9Y6Y0 642 aa7.99□□□□□ -1.13
UBR4-214ENST00000486515 BTBD19C9JJ37 291 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 VWA5AO00534 786 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 STX6O43752 255 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 SLC25A27O95847 323 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 ICAM1P05362 532 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 ALAS1P13196 640 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 ADCY7P51828 1080 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 HERVK_113P62684 666 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 KIF22Q14807 665 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 QRICH1Q2TAL8 776 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 TKFCQ3LXA3 575 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 TREML2Q5T2D2 321 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 SNRNP48Q6IEG0 339 aaKnown RBP7.98□□□□□ -1.13
UBR4-214ENST00000486515 SMARCC2Q8TAQ2 1214 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 COL26A1Q96A83 441 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 MS4A4AQ96JQ5 239 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 MPHOSPH6Q99547 160 aaKnown RBP7.98□□□□□ -1.13
UBR4-214ENST00000486515 C1QTNF1Q9BXJ1 281 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 CFHR5Q9BXR6 569 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 TEX13BQ9BXU2 312 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 ASCC2Q9H1I8 757 aaPredicted RBP7.98□□□□□ -1.13
UBR4-214ENST00000486515 CPVLQ9H3G5 476 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 FAM217BQ9NTX9 383 aaPredicted RBP7.98□□□□□ -1.13
UBR4-214ENST00000486515 BARHL2Q9NY43 387 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 CIZ1Q9ULV3 898 aaPredicted RBP7.98□□□□□ -1.13
UBR4-214ENST00000486515 RABGAP1Q9Y3P9 1069 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 ABCB11O95342 1321 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 CNTNAP5Q8WYK1 1306 aa7.98□□□□□ -1.13
UBR4-214ENST00000486515 CCDC194A0A1B0GVG4 234 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 hCG_1642624A0A1W2PR95 340 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 SMCO2A6NFE2 343 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 SPDYE3A6NKU9 549 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 B4DLN1 442 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 CTDNEP1O95476 244 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 BMP8BP34820 402 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 KRT2P35908 639 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 GJA5P36382 358 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 STAT3P40763 770 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 TM4SF4P48230 202 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 MRE11P49959 708 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms