RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 BMP3P12645 472 aa19.19■□□□□ 0.66
DDX56-210ENST00000479440 TFF2Q03403 129 aa19.19■□□□□ 0.66
DDX56-210ENST00000479440 ZNF444Q8N0Y2 327 aaPredicted RBP19.19■□□□□ 0.66
DDX56-210ENST00000479440 PANK1Q8TE04 598 aa19.19■□□□□ 0.66
DDX56-210ENST00000479440 MKL1Q969V6 931 aa19.19■□□□□ 0.66
DDX56-210ENST00000479440 CEP95Q96GE4 821 aa19.19■□□□□ 0.66
DDX56-210ENST00000479440 STRBPQ96SI9 672 aaKnown RBP19.19■□□□□ 0.66
DDX56-210ENST00000479440 TRPV6Q9H1D0 765 aa19.19■□□□□ 0.66
DDX56-210ENST00000479440 Q9Y3F1 56 aa19.19■□□□□ 0.66
DDX56-210ENST00000479440 ARIH1Q9Y4X5 557 aaPredicted RBP19.19■□□□□ 0.66
DDX56-210ENST00000479440 MYH4Q9Y623 1939 aa19.19■□□□□ 0.66
DDX56-210ENST00000479440 PLIN4Q96Q06 1357 aa19.19■□□□□ 0.66
DDX56-210ENST00000479440 DYNC1LI2O43237 492 aaPredicted RBP19.18■□□□□ 0.66
DDX56-210ENST00000479440 MYOGP15173 224 aa19.18■□□□□ 0.66
DDX56-210ENST00000479440 HOXD11P31277 338 aaPredicted RBP19.18■□□□□ 0.66
DDX56-210ENST00000479440 IKQ13123 557 aaPredicted RBP19.18■□□□□ 0.66
DDX56-210ENST00000479440 TMEM67Q5HYA8 995 aa19.18■□□□□ 0.66
DDX56-210ENST00000479440 SLFN13Q68D06 897 aa19.18■□□□□ 0.66
DDX56-210ENST00000479440 FAM160B2Q86V87 743 aa19.18■□□□□ 0.66
DDX56-210ENST00000479440 MTMR4Q9NYA4 1195 aa19.18■□□□□ 0.66
DDX56-210ENST00000479440 COG5Q9UP83 839 aa19.18■□□□□ 0.66
DDX56-210ENST00000479440 GRIN2DO15399 1336 aa19.18■□□□□ 0.66
DDX56-210ENST00000479440 GSG1L2A8MUP6 293 aa19.17■□□□□ 0.66
DDX56-210ENST00000479440 SUPT20HL2P0C7V6 817 aa19.17■□□□□ 0.66
DDX56-210ENST00000479440 MS4A1P11836 297 aa19.17■□□□□ 0.66
DDX56-210ENST00000479440 ACTN1P12814 892 aa19.17■□□□□ 0.66
DDX56-210ENST00000479440 SMPD1P17405 629 aa19.17■□□□□ 0.66
DDX56-210ENST00000479440 TDO2P48775 406 aa19.17■□□□□ 0.66
DDX56-210ENST00000479440 KCNQ1P51787 676 aa19.17■□□□□ 0.66
DDX56-210ENST00000479440 IQSEC1Q6DN90 963 aa19.17■□□□□ 0.66
DDX56-210ENST00000479440 FBXO16Q8IX29 292 aaPredicted RBP19.17■□□□□ 0.66
DDX56-210ENST00000479440 SCLYQ96I15 445 aa19.17■□□□□ 0.66
DDX56-210ENST00000479440 SLC9A7Q96T83 725 aa19.17■□□□□ 0.66
DDX56-210ENST00000479440 ALDH8A1Q9H2A2 487 aaPredicted RBP19.17■□□□□ 0.66
DDX56-210ENST00000479440 CHD9Q3L8U1 2897 aa19.17■□□□□ 0.66
DDX56-210ENST00000479440 SOWAHBA6NEL2 793 aa19.16■□□□□ 0.66
DDX56-210ENST00000479440 TMEM232C9JQI7 657 aa19.16■□□□□ 0.66
DDX56-210ENST00000479440 CA3P07451 260 aa19.16■□□□□ 0.66
DDX56-210ENST00000479440 GNAT2P19087 354 aa19.16■□□□□ 0.66
DDX56-210ENST00000479440 POU3F3P20264 500 aaPredicted RBP19.16■□□□□ 0.66
DDX56-210ENST00000479440 PSMC6P62333 389 aa19.16■□□□□ 0.66
DDX56-210ENST00000479440 CHURC1Q8WUH1 139 aa19.16■□□□□ 0.66
DDX56-210ENST00000479440 AGBL1Q96MI9 1066 aa19.16■□□□□ 0.66
DDX56-210ENST00000479440 VTA1Q9NP79 307 aa19.16■□□□□ 0.66
DDX56-210ENST00000479440 MTCH2Q9Y6C9 303 aa19.16■□□□□ 0.66
DDX56-210ENST00000479440 PRDM1O75626 825 aa19.15■□□□□ 0.66
DDX56-210ENST00000479440 APPBP2Q92624 585 aa19.15■□□□□ 0.66
DDX56-210ENST00000479440 GMCL1Q96IK5 515 aa19.15■□□□□ 0.66
DDX56-210ENST00000479440 TRERF1Q96PN7 1200 aa19.15■□□□□ 0.66
DDX56-210ENST00000479440 POLR3EQ9NVU0 708 aa19.15■□□□□ 0.66
DDX56-210ENST00000479440 DDX19BQ9UMR2 479 aa19.15■□□□□ 0.66
DDX56-210ENST00000479440 TSPY3P0CV98 308 aa19.14■□□□□ 0.65
DDX56-210ENST00000479440 TSPY8P0CW00 308 aa19.14■□□□□ 0.65
DDX56-210ENST00000479440 ALAS1P13196 640 aa19.14■□□□□ 0.65
DDX56-210ENST00000479440 RFC2P35250 354 aa19.14■□□□□ 0.65
DDX56-210ENST00000479440 SLC1A4P43007 532 aa19.14■□□□□ 0.65
DDX56-210ENST00000479440 TTLL4Q14679 1199 aa19.14■□□□□ 0.65
DDX56-210ENST00000479440 PPP4R3BQ5MIZ7 849 aa19.14■□□□□ 0.65
DDX56-210ENST00000479440 EEPD1Q7L9B9 569 aa19.14■□□□□ 0.65
DDX56-210ENST00000479440 SIRT2Q8IXJ6 389 aa19.14■□□□□ 0.65
DDX56-210ENST00000479440 STAG1Q8WVM7 1258 aa19.14■□□□□ 0.65
DDX56-210ENST00000479440 EPB41L4AQ9HCS5 686 aaPredicted RBP19.14■□□□□ 0.65
DDX56-210ENST00000479440 ZNF536O15090 1300 aa19.14■□□□□ 0.65
DDX56-210ENST00000479440 TNKSO95271 1327 aa19.14■□□□□ 0.65
DDX56-210ENST00000479440 GPAA1O43292 621 aa19.13■□□□□ 0.65
DDX56-210ENST00000479440 TMEM31Q5JXX7 168 aa19.13■□□□□ 0.65
DDX56-210ENST00000479440 TAPT1Q6NXT6 567 aa19.13■□□□□ 0.65
DDX56-210ENST00000479440 DEFB128Q7Z7B8 93 aa19.13■□□□□ 0.65
DDX56-210ENST00000479440 KBTBD3Q8NAB2 608 aa19.13■□□□□ 0.65
DDX56-210ENST00000479440 LRRCC1Q9C099 1032 aa19.13■□□□□ 0.65
DDX56-210ENST00000479440 CHMP4BQ9H444 224 aaKnown RBP19.13■□□□□ 0.65
DDX56-210ENST00000479440 PDGFCQ9NRA1 345 aa19.13■□□□□ 0.65
DDX56-210ENST00000479440 CYP39A1Q9NYL5 469 aa19.13■□□□□ 0.65
DDX56-210ENST00000479440 APPP05067 770 aa19.12■□□□□ 0.65
DDX56-210ENST00000479440 ZFYP08048 801 aaPredicted RBP19.12■□□□□ 0.65
DDX56-210ENST00000479440 SLC3A2P08195 630 aaKnown RBP19.12■□□□□ 0.65
DDX56-210ENST00000479440 PTGS1P23219 599 aa19.12■□□□□ 0.65
DDX56-210ENST00000479440 CPT1AP50416 773 aa19.12■□□□□ 0.65
DDX56-210ENST00000479440 PDE4BQ07343 736 aa19.12■□□□□ 0.65
DDX56-210ENST00000479440 KIAA1211Q6ZU35 1233 aa19.12■□□□□ 0.65
DDX56-210ENST00000479440 NEDD1Q8NHV4 660 aa19.12■□□□□ 0.65
DDX56-210ENST00000479440 PHOSPHO2Q8TCD6 241 aa19.12■□□□□ 0.65
DDX56-210ENST00000479440 OSBP2Q969R2 916 aa19.12■□□□□ 0.65
DDX56-210ENST00000479440 VWCEQ96DN2 955 aa19.12■□□□□ 0.65
DDX56-210ENST00000479440 LRFN3Q9BTN0 628 aa19.12■□□□□ 0.65
DDX56-210ENST00000479440 CERS4Q9HA82 394 aa19.12■□□□□ 0.65
DDX56-210ENST00000479440 TRMT13Q9NUP7 481 aaKnown RBP19.12■□□□□ 0.65
DDX56-210ENST00000479440 TANC1Q9C0D5 1861 aa19.11■□□□□ 0.65
DDX56-210ENST00000479440 RAD50Q92878 1312 aa19.11■□□□□ 0.65
DDX56-210ENST00000479440 KIF28PB7ZC32 967 aa19.11■□□□□ 0.65
DDX56-210ENST00000479440 PLA2G6O60733 806 aa19.11■□□□□ 0.65
DDX56-210ENST00000479440 CYP2C9P11712 490 aa19.11■□□□□ 0.65
DDX56-210ENST00000479440 DUSP28Q4G0W2 176 aa19.11■□□□□ 0.65
DDX56-210ENST00000479440 ARNTL2Q8WYA1 636 aa19.11■□□□□ 0.65
DDX56-210ENST00000479440 HLA-CQ95604 372 aa19.11■□□□□ 0.65
DDX56-210ENST00000479440 GPATCH3Q96I76 525 aa19.11■□□□□ 0.65
DDX56-210ENST00000479440 NACAP1Q9BZK3 213 aa19.11■□□□□ 0.65
DDX56-210ENST00000479440 GPHNQ9NQX3 736 aaPredicted RBP19.11■□□□□ 0.65
DDX56-210ENST00000479440 ECHDC1Q9NTX5 307 aa19.11■□□□□ 0.65
DDX56-210ENST00000479440 ZBTB40Q9NUA8 1239 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms