RNA–Protein interactions for RNA: ENST00000478954.1

STRADBP1-201, Transcript of STE20-related kinase adaptor beta pseudogene 1, humanhuman

BASIC

Gene STRADBP1, Length 1,281 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBP1-201ENST00000478954 DDX42Q86XP3 938 aaKnown RBP eCLIP7.56□□□□□ -1.2
STRADBP1-201ENST00000478954 SHISA5Q8N114 240 aa7.56□□□□□ -1.2
STRADBP1-201ENST00000478954 UBR7Q8N806 425 aa7.56□□□□□ -1.2
STRADBP1-201ENST00000478954 EZH1Q92800 747 aaPredicted RBP7.56□□□□□ -1.2
STRADBP1-201ENST00000478954 SEMA6CQ9H3T2 930 aa7.56□□□□□ -1.2
STRADBP1-201ENST00000478954 C19orf44Q9H6X5 657 aa7.56□□□□□ -1.2
STRADBP1-201ENST00000478954 SLC12A7Q9Y666 1083 aa7.56□□□□□ -1.2
STRADBP1-201ENST00000478954 SNCAIPQ9Y6H5 919 aa7.56□□□□□ -1.2
STRADBP1-201ENST00000478954 CEP152O94986 1710 aa7.55□□□□□ -1.2
STRADBP1-201ENST00000478954 NUP188Q5SRE5 1749 aa7.55□□□□□ -1.2
STRADBP1-201ENST00000478954 NFICP08651 508 aa7.55□□□□□ -1.2
STRADBP1-201ENST00000478954 ATF3P18847 181 aa7.55□□□□□ -1.2
STRADBP1-201ENST00000478954 RING1Q06587 406 aa7.55□□□□□ -1.2
STRADBP1-201ENST00000478954 PRSS36Q5K4E3 855 aa7.55□□□□□ -1.2
STRADBP1-201ENST00000478954 CHAC2Q8WUX2 184 aa7.55□□□□□ -1.2
STRADBP1-201ENST00000478954 EXOC2Q96KP1 924 aa7.55□□□□□ -1.2
STRADBP1-201ENST00000478954 ATXN3LQ9H3M9 355 aa7.55□□□□□ -1.2
STRADBP1-201ENST00000478954 PHAXQ9H814 394 aaKnown RBP7.55□□□□□ -1.2
STRADBP1-201ENST00000478954 STOML1Q9UBI4 398 aa7.55□□□□□ -1.2
STRADBP1-201ENST00000478954 GABBR1Q9UBS5 961 aa7.55□□□□□ -1.2
STRADBP1-201ENST00000478954 COL22A1Q8NFW1 1626 aaPredicted RBP7.55□□□□□ -1.2
STRADBP1-201ENST00000478954 RREB1Q92766 1687 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 DISP2A7MBM2 1401 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 KIAA1107Q9UPP5 1409 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 CCDC194A0A1B0GVG4 234 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 CHURC1-FNTBB4DL54 471 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 HSPA6P17066 643 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 FSTP19883 344 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 ERVK-24P63145 666 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 EZH2Q15910 746 aaKnown RBP7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 TMEM201Q5SNT2 666 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 CYFIP1Q7L576 1253 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 CLEC10AQ8IUN9 316 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 KISS1RQ969F8 398 aaPredicted RBP7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 SGSM3Q96HU1 749 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 CLUHP3Q96NS8 147 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 FAM83CQ9BQN1 747 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 LGR6Q9HBX8 967 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 SPON1Q9HCB6 807 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 DAGLAQ9Y4D2 1042 aa7.54□□□□□ -1.2
STRADBP1-201ENST00000478954 LAMC1P11047 1609 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 FAM95CA0A1B0GW59 222 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 RFPL3O75679 317 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 POLR2BP30876 1174 aaKnown RBP7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 SLC7A5Q01650 507 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 EXOSC10Q01780 885 aaKnown RBP7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 NFKBIBQ15653 356 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 SEZ6L2Q6UXD5 910 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 HDXQ7Z353 690 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 RNF180Q86T96 592 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 LRRC47Q8N1G4 583 aaKnown RBP7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 ISL2Q96A47 359 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 EPN3Q9H201 632 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 CAAP1Q9H8G2 361 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 NCOA5Q9HCD5 579 aaKnown RBP7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 KLHL3Q9UH77 587 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 ZNF214Q9UL59 606 aaPredicted RBP7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 RIPOR2Q9Y4F9 1068 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 NRKQ7Z2Y5 1582 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 MYOM1P52179 1685 aa7.53□□□□□ -1.2
STRADBP1-201ENST00000478954 MST1RQ04912 1400 aa7.52□□□□□ -1.2
STRADBP1-201ENST00000478954 PRAMEF27A3QJZ7 478 aa7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 PDE8AO60658 829 aa7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 ADMP35318 185 aa7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 HNRNPUQ00839 825 aaKnown RBP eCLIP7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 FAM50AQ14320 339 aaKnown RBP7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 GNPTABQ3T906 1256 aa7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 FAM209AQ5JX71 171 aa7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 YOD1Q5VVQ6 348 aaPredicted RBP7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 KRT27Q7Z3Y8 459 aa7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 RNF214Q8ND24 703 aa7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 GATA6Q92908 595 aa7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 ELMO3Q96BJ8 720 aa7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 PIDD1Q9HB75 910 aa7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 ARHGEF4Q9NR80 690 aa7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 TACC3Q9Y6A5 838 aa7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 PCNTO95613 3336 aa7.52□□□□□ -1.21
STRADBP1-201ENST00000478954 A0A1W2PQU0 124 aa7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 IQCA1LA6NCM1 817 aa7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 GSG1L2A8MUP6 293 aa7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 RNGTTO60942 597 aaKnown RBP7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 GRK4P32298 578 aa7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 NFKB2Q00653 900 aa7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 NFIAQ12857 509 aa7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 ZC3H12BQ5HYM0 836 aaKnown RBP7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 ZBTB37Q5TC79 503 aa7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 RNF43Q68DV7 783 aa7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 SMYD4Q8IYR2 804 aaPredicted RBP7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 ACSF2Q96CM8 615 aaPredicted RBP7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 MFSD14AQ96MC6 490 aa7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 CEP89Q96ST8 783 aa7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 C1GALT1Q9NS00 363 aa7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 SUSD2Q9UGT4 822 aa7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 GOLGB1Q14789 3259 aaKnown RBP7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 EFCAB6Q5THR3 1501 aa7.51□□□□□ -1.21
STRADBP1-201ENST00000478954 MYOM2P54296 1465 aa7.5□□□□□ -1.21
STRADBP1-201ENST00000478954 LOC102724159A0A0B4J2E5 919 aa7.5□□□□□ -1.21
STRADBP1-201ENST00000478954 CCDC163A0A0D9SF12 145 aa7.5□□□□□ -1.21
STRADBP1-201ENST00000478954 TPD52L2O43399 206 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms