RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 CALM2P0DP24 149 aa17.49■□□□□ 0.39
DFFA-203ENST00000476658 CALM3P0DP25 149 aa17.49■□□□□ 0.39
DFFA-203ENST00000476658 CPA1P15085 419 aa17.49■□□□□ 0.39
DFFA-203ENST00000476658 RXRAP19793 462 aa17.49■□□□□ 0.39
DFFA-203ENST00000476658 CNGA1P29973 690 aa17.49■□□□□ 0.39
DFFA-203ENST00000476658 MLLT1Q03111 559 aaPredicted RBP17.49■□□□□ 0.39
DFFA-203ENST00000476658 BLOC1S2Q6QNY1 142 aa17.49■□□□□ 0.39
DFFA-203ENST00000476658 SYNE3Q6ZMZ3 975 aa17.49■□□□□ 0.39
DFFA-203ENST00000476658 RAB11FIP4Q86YS3 637 aa17.49■□□□□ 0.39
DFFA-203ENST00000476658 TINF2Q9BSI4 451 aa17.49■□□□□ 0.39
DFFA-203ENST00000476658 LCTP09848 1927 aa17.49■□□□□ 0.39
DFFA-203ENST00000476658 PTPDC1A2A3K4 754 aa17.48■□□□□ 0.39
DFFA-203ENST00000476658 NFIBO00712 420 aa17.48■□□□□ 0.39
DFFA-203ENST00000476658 PSMA5P28066 241 aa17.48■□□□□ 0.39
DFFA-203ENST00000476658 CNTN2Q02246 1040 aa17.48■□□□□ 0.39
DFFA-203ENST00000476658 SGMS1Q86VZ5 419 aa17.48■□□□□ 0.39
DFFA-203ENST00000476658 FBXO11Q86XK2 927 aa17.48■□□□□ 0.39
DFFA-203ENST00000476658 HOMER1Q86YM7 354 aa17.48■□□□□ 0.39
DFFA-203ENST00000476658 CCDC144CPQ8IYA2 1237 aa17.48■□□□□ 0.39
DFFA-203ENST00000476658 SHISA4Q96DD7 197 aa17.48■□□□□ 0.39
DFFA-203ENST00000476658 MAP3K14Q99558 947 aa17.48■□□□□ 0.39
DFFA-203ENST00000476658 CYP39A1Q9NYL5 469 aa17.48■□□□□ 0.39
DFFA-203ENST00000476658 IGHA2P01877 340 aa17.47■□□□□ 0.39
DFFA-203ENST00000476658 CYBAP13498 195 aa17.47■□□□□ 0.39
DFFA-203ENST00000476658 CASTP20810 708 aaKnown RBP17.47■□□□□ 0.39
DFFA-203ENST00000476658 BAATQ14032 418 aaPredicted RBP17.47■□□□□ 0.39
DFFA-203ENST00000476658 PRAMEF19Q5SWL8 479 aa17.47■□□□□ 0.39
DFFA-203ENST00000476658 MICU3Q86XE3 530 aa17.47■□□□□ 0.39
DFFA-203ENST00000476658 FAM133AQ8N9E0 248 aa17.47■□□□□ 0.39
DFFA-203ENST00000476658 TRPV1Q8NER1 839 aa17.47■□□□□ 0.39
DFFA-203ENST00000476658 NAP1L2Q9ULW6 460 aaPredicted RBP17.47■□□□□ 0.39
DFFA-203ENST00000476658 ABCB11O95342 1321 aa17.47■□□□□ 0.39
DFFA-203ENST00000476658 ZBTB5O15062 677 aa17.46■□□□□ 0.39
DFFA-203ENST00000476658 EIF5BO60841 1220 aaKnown RBP17.46■□□□□ 0.39
DFFA-203ENST00000476658 RPS6KB1P23443 525 aa17.46■□□□□ 0.39
DFFA-203ENST00000476658 GNAQP50148 359 aa17.46■□□□□ 0.39
DFFA-203ENST00000476658 SLC35G1Q2M3R5 365 aa17.46■□□□□ 0.39
DFFA-203ENST00000476658 APOA5Q6Q788 366 aa17.46■□□□□ 0.39
DFFA-203ENST00000476658 Q6ZUG5 572 aa17.46■□□□□ 0.39
DFFA-203ENST00000476658 ZNF467Q7Z7K2 595 aaPredicted RBP17.46■□□□□ 0.39
DFFA-203ENST00000476658 MSL3Q8N5Y2 521 aaKnown RBP17.46■□□□□ 0.39
DFFA-203ENST00000476658 CLEC4DQ8WXI8 215 aa17.46■□□□□ 0.39
DFFA-203ENST00000476658 PIBF1Q8WXW3 757 aa17.46■□□□□ 0.39
DFFA-203ENST00000476658 MTMR8Q96EF0 704 aa17.46■□□□□ 0.39
DFFA-203ENST00000476658 FGD4Q96M96 766 aa17.46■□□□□ 0.39
DFFA-203ENST00000476658 PIGSQ96S52 555 aa17.46■□□□□ 0.39
DFFA-203ENST00000476658 AMNQ9BXJ7 453 aa17.46■□□□□ 0.39
DFFA-203ENST00000476658 RIOX1Q9H6W3 641 aa17.46■□□□□ 0.39
DFFA-203ENST00000476658 CNPY2Q9Y2B0 182 aa17.46■□□□□ 0.39
DFFA-203ENST00000476658 SYNGAP1Q96PV0 1343 aa17.46■□□□□ 0.38
DFFA-203ENST00000476658 KLF18A0A0U1RQI7 1052 aa17.45■□□□□ 0.38
DFFA-203ENST00000476658 CYTH3O43739 400 aa17.45■□□□□ 0.38
DFFA-203ENST00000476658 CALML3P27482 149 aa17.45■□□□□ 0.38
DFFA-203ENST00000476658 RNF207Q6ZRF8 634 aa17.45■□□□□ 0.38
DFFA-203ENST00000476658 FANCBQ8NB91 859 aa17.45■□□□□ 0.38
DFFA-203ENST00000476658 LZTS2Q9BRK4 669 aa17.45■□□□□ 0.38
DFFA-203ENST00000476658 CRISPLD2Q9H0B8 497 aa17.45■□□□□ 0.38
DFFA-203ENST00000476658 DDX20Q9UHI6 824 aaKnown RBP17.45■□□□□ 0.38
DFFA-203ENST00000476658 BRPF3Q9ULD4 1205 aa17.45■□□□□ 0.38
DFFA-203ENST00000476658 MRPL11Q9Y3B7 192 aaKnown RBP17.45■□□□□ 0.38
DFFA-203ENST00000476658 SOWAHBA6NEL2 793 aa17.44■□□□□ 0.38
DFFA-203ENST00000476658 ZBTB43O43298 467 aa17.44■□□□□ 0.38
DFFA-203ENST00000476658 MSCO60682 206 aa17.44■□□□□ 0.38
DFFA-203ENST00000476658 PLEKHA8P1O95397 391 aa17.44■□□□□ 0.38
DFFA-203ENST00000476658 MAMDC4Q6UXC1 1216 aa17.44■□□□□ 0.38
DFFA-203ENST00000476658 SLC30A10Q6XR72 485 aa17.44■□□□□ 0.38
DFFA-203ENST00000476658 ARMCX2Q7L311 632 aa17.44■□□□□ 0.38
DFFA-203ENST00000476658 CMTR1Q8N1G2 835 aaKnown RBP17.44■□□□□ 0.38
DFFA-203ENST00000476658 PURBQ96QR8 312 aaKnown RBP17.44■□□□□ 0.38
DFFA-203ENST00000476658 SPZ1Q9BXG8 430 aa17.44■□□□□ 0.38
DFFA-203ENST00000476658 NRBP1Q9UHY1 535 aa17.44■□□□□ 0.38
DFFA-203ENST00000476658 ZHX1Q9UKY1 873 aaPredicted RBP17.44■□□□□ 0.38
DFFA-203ENST00000476658 PCDHA1Q9Y5I3 950 aa17.44■□□□□ 0.38
DFFA-203ENST00000476658 PDE4DIPQ5VU43 2346 aa17.44■□□□□ 0.38
DFFA-203ENST00000476658 PNMA6FA0A0J9YX94 578 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 ASB14A6NK59 587 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 SEPT4O43236 478 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 PPP1R11O60927 126 aaPredicted RBP17.43■□□□□ 0.38
DFFA-203ENST00000476658 FARP2O94887 1054 aaPredicted RBP17.43■□□□□ 0.38
DFFA-203ENST00000476658 SNAI1O95863 264 aaPredicted RBP17.43■□□□□ 0.38
DFFA-203ENST00000476658 CAPN2P17655 700 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 RPS6P62753 249 aaKnown RBP17.43■□□□□ 0.38
DFFA-203ENST00000476658 APOBRQ0VD83 1088 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 TRAF1Q13077 416 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 RTN1Q16799 776 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 ANO1Q5XXA6 986 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 LHX8Q68G74 356 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 RUFY3Q7L099 469 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 MCF2L2Q86YR7 1114 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 CCDC82Q8N4S0 544 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 SRBD1Q8N5C6 995 aaKnown RBP17.43■□□□□ 0.38
DFFA-203ENST00000476658 BRF1Q92994 677 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 RRP36Q96EU6 259 aaKnown RBP17.43■□□□□ 0.38
DFFA-203ENST00000476658 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.43■□□□□ 0.38
DFFA-203ENST00000476658 ADD3Q9UEY8 706 aaKnown RBP17.43■□□□□ 0.38
DFFA-203ENST00000476658 SEC63Q9UGP8 760 aaKnown RBP17.43■□□□□ 0.38
DFFA-203ENST00000476658 OGDHLQ9ULD0 1010 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 CYP46A1Q9Y6A2 500 aa17.43■□□□□ 0.38
DFFA-203ENST00000476658 GOLGA8AA7E2F4 631 aa17.42■□□□□ 0.38
DFFA-203ENST00000476658 GOLGA8BA8MQT2 603 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms