RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 FBXO38Q6PIJ6 1188 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 LVRNQ6Q4G3 990 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 ANGPTL8Q6UXH0 198 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 RAPH1Q70E73 1250 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 CATSPER4Q7RTX7 472 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 TMC4Q7Z404 712 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 SPATA24Q86W54 205 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 GRAMD2AQ8IUY3 354 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 CCDC83Q8IWF9 413 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 SLC15A3Q8IY34 581 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 AADATQ8N5Z0 425 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 ZNF713Q8N859 430 aaPredicted RBP4.26□□□□□ -1.73
LSM2-211ENST00000475835 SMC1BQ8NDV3 1235 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 CCHCR1Q8TD31 782 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 IFT81Q8WYA0 676 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 OTUD5Q96G74 571 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 RPGRIP1Q96KN7 1286 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 RBM14Q96PK6 669 aaKnown RBP4.26□□□□□ -1.73
LSM2-211ENST00000475835 PSKH2Q96QS6 385 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 TSC22D3Q99576 134 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 RHOXF2Q9BQY4 288 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 NIFKQ9BYG3 293 aaKnown RBP4.26□□□□□ -1.73
LSM2-211ENST00000475835 DNAJC25Q9H1X3 360 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 CENPHQ9H3R5 247 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 DBNDD1Q9H9R9 158 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 PICK1Q9NRD5 415 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 NDUFA13Q9P0J0 144 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 SCHIP1Q9P0W5 487 aaPredicted RBP4.26□□□□□ -1.73
LSM2-211ENST00000475835 ZC3H7BQ9UGR2 993 aaKnown RBP4.26□□□□□ -1.73
LSM2-211ENST00000475835 FBXL5Q9UKA1 691 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 CNPY2Q9Y2B0 182 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 ATP11BQ9Y2G3 1177 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 SH3GLB1Q9Y371 365 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 ZNF330Q9Y3S2 320 aaPredicted RBP4.26□□□□□ -1.73
LSM2-211ENST00000475835 CHD1O14646 1710 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 DISP3Q9P2K9 1392 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 ASXL1Q8IXJ9 1541 aa4.26□□□□□ -1.73
LSM2-211ENST00000475835 ZNF804BA4D1E1 1349 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 USP19O94966 1318 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 GOLGA6L7A0A1B0GV03 622 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 POTEFA5A3E0 1075 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 PALM3A6NDB9 673 aaPredicted RBP4.25□□□□□ -1.73
LSM2-211ENST00000475835 TMEM247A6NEH6 219 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 TRIM64A6NGJ6 449 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 TRIM64BA6NI03 449 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 BTBD11A6QL63 1104 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 RASA4BC9J798 803 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 BHMG1C9JSJ3 638 aaPredicted RBP4.25□□□□□ -1.73
LSM2-211ENST00000475835 CYP27B1O15528 508 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 KCNJ13O60928 360 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 SMNDC1O75940 238 aaKnown RBP eCLIP4.25□□□□□ -1.73
LSM2-211ENST00000475835 MAP3K6O95382 1288 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 CAVIN2O95810 425 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 BAG2O95816 211 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 OLFM2O95897 454 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 CNGA1P29973 690 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 NOS2P35228 1153 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 HSD17B2P37059 387 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 MLH1P40692 756 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 UBA7P41226 1012 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 ASMTP46597 345 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 CD97P48960 835 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 MAPKAPK2P49137 400 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 HSD17B7P56937 341 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 GEMIN4P57678 1058 aaKnown RBP4.25□□□□□ -1.73
LSM2-211ENST00000475835 DSTNP60981 165 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 RAC1P63000 192 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 OLR1P78380 273 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 KRT83P78385 493 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 PDE1BQ01064 536 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 AKAP17AQ02040 695 aaKnown RBP4.25□□□□□ -1.73
LSM2-211ENST00000475835 GUCY1B3Q02153 619 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 HSPA14Q0VDF9 509 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 GRSF1Q12849 480 aaKnown RBP eCLIP4.25□□□□□ -1.73
LSM2-211ENST00000475835 BNIP1Q12981 228 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 DRP2Q13474 957 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 SPIDRQ14159 915 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 KCNB1Q14721 858 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 RAB3GAP1Q15042 981 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 NONOQ15233 471 aaKnown RBP eCLIP4.25□□□□□ -1.73
LSM2-211ENST00000475835 SNCBQ16143 134 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 PABPC1LQ4VXU2 614 aaKnown RBP4.25□□□□□ -1.73
LSM2-211ENST00000475835 BRDTQ58F21 947 aaPredicted RBP4.25□□□□□ -1.73
LSM2-211ENST00000475835 ODR4Q5SWX8 454 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 BEND6Q5SZJ8 279 aaPredicted RBP4.25□□□□□ -1.73
LSM2-211ENST00000475835 METTL11BQ5VVY1 283 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 PPP4R3AQ6IN85 833 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 PPP4R4Q6NUP7 873 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 TMEM53Q6P2H8 277 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 LRSAM1Q6UWE0 723 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 TMCO3Q6UWJ1 677 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 PPP1R21Q6ZMI0 780 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 CCDC129Q6ZRS4 1044 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 RALYLQ86SE5 291 aaKnown RBP4.25□□□□□ -1.73
LSM2-211ENST00000475835 DDX42Q86XP3 938 aaKnown RBP eCLIP4.25□□□□□ -1.73
LSM2-211ENST00000475835 TMEM151BQ8IW70 566 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 IFNL2Q8IZJ0 200 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 SPARTQ8N0X7 666 aa4.25□□□□□ -1.73
LSM2-211ENST00000475835 PROM2Q8N271 834 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms