RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-208	ENST00000474319	CCNT1	O60563	726 aa	Known RBP	12.01	□□□□□ -0.49
LSS-208	ENST00000474319	APBA1	Q02410	837 aa		12.01	□□□□□ -0.49
LSS-208	ENST00000474319	CACNB1	Q02641	598 aa	Predicted RBP	12.01	□□□□□ -0.49
LSS-208	ENST00000474319	C2CD5	Q86YS7	1000 aa		12.01	□□□□□ -0.49
LSS-208	ENST00000474319	MAPKAPK5	Q8IW41	473 aa		12.01	□□□□□ -0.49
LSS-208	ENST00000474319	ZNF579	Q8NAF0	562 aa	Known RBP	12.01	□□□□□ -0.49
LSS-208	ENST00000474319	NLRC4	Q9NPP4	1024 aa		12.01	□□□□□ -0.49
LSS-208	ENST00000474319	ZNHIT6	Q9NWK9	470 aa	Known RBP	12.01	□□□□□ -0.49
LSS-208	ENST00000474319	SAR1B	Q9Y6B6	198 aa		12.01	□□□□□ -0.49
LSS-208	ENST00000474319	PRPF3	O43395	683 aa	Known RBP	12.01	□□□□□ -0.49
LSS-208	ENST00000474319	MOCS3	O95396	460 aa		12.01	□□□□□ -0.49
LSS-208	ENST00000474319	GYS1	P13807	737 aa		12.01	□□□□□ -0.49
LSS-208	ENST00000474319	HIBADH	P31937	336 aa	Known RBP	12.01	□□□□□ -0.49
LSS-208	ENST00000474319	ACTN2	P35609	894 aa		12.01	□□□□□ -0.49
LSS-208	ENST00000474319	TXK	P42681	527 aa		12.01	□□□□□ -0.49
LSS-208	ENST00000474319	NPY5R	Q15761	445 aa		12.01	□□□□□ -0.49
LSS-208	ENST00000474319	CLEC4G	Q6UXB4	293 aa		12.01	□□□□□ -0.49
LSS-208	ENST00000474319	SND1	Q7KZF4	910 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
LSS-208	ENST00000474319	PDE2A	O00408	941 aa	Predicted RBP	12	□□□□□ -0.49
LSS-208	ENST00000474319	GGCX	P38435	758 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	HERVK_113	P62684	666 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	CLEC10A	Q8IUN9	316 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	RRP36	Q96EU6	259 aa	Known RBP	12	□□□□□ -0.49
LSS-208	ENST00000474319	TUBGCP2	Q9BSJ2	902 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	NOC4L	Q9BVI4	516 aa	Known RBP	12	□□□□□ -0.49
LSS-208	ENST00000474319	RASSF4	Q9H2L5	321 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	MYH15	Q9Y2K3	1946 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	GTPBP6	O43824	516 aa	Predicted RBP	12	□□□□□ -0.49
LSS-208	ENST00000474319	RBM5	P52756	815 aa	Known RBP eCLIP	12	□□□□□ -0.49
LSS-208	ENST00000474319	ATP2C1	P98194	919 aa	Predicted RBP	12	□□□□□ -0.49
LSS-208	ENST00000474319	FUT2	Q10981	343 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	STK4	Q13043	487 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	PDXDC2P	Q6P474	469 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	IRF2BP1	Q8IU81	584 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	BLID	Q8IZY5	108 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	CNPY4	Q8N129	248 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	MB21D1	Q8N884	522 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	CWC15	Q9P013	229 aa	Known RBP	12	□□□□□ -0.49
LSS-208	ENST00000474319	BIN2	Q9UBW5	565 aa	Predicted RBP	12	□□□□□ -0.49
LSS-208	ENST00000474319	SIPA1L3	O60292	1781 aa	Predicted RBP	12	□□□□□ -0.49
LSS-208	ENST00000474319	CNTNAP5	Q8WYK1	1306 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	PLCG1	P19174	1290 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	CHRNA5	P30532	468 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	ATP1A2	P50993	1020 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	TDRD12	Q587J7	1177 aa	Known RBP	12	□□□□□ -0.49
LSS-208	ENST00000474319	COL23A1	Q86Y22	540 aa	Predicted RBP	12	□□□□□ -0.49
LSS-208	ENST00000474319	PNMA1	Q8ND90	353 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	RIOK1	Q9BRS2	568 aa	Known RBP	12	□□□□□ -0.49
LSS-208	ENST00000474319	SAMM50	Q9Y512	469 aa		12	□□□□□ -0.49
LSS-208	ENST00000474319	PSMA7	O14818	248 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	AKR1B10	O60218	316 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.99	□□□□□ -0.49
LSS-208	ENST00000474319	NFRKB	Q6P4R8	1299 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	SPATA20	Q8TB22	786 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	LRRC15	Q8TF66	581 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	COG1	Q8WTW3	980 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	TGFBRAP1	Q8WUH2	860 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	IFT81	Q8WYA0	676 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	CCDC42	Q96M95	316 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	MXD3	Q9BW11	206 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	MARCH6	O60337	910 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	PBX1	P40424	430 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	USP17L2	Q6R6M4	530 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	FAM84B	Q96KN1	310 aa	Predicted RBP	11.99	□□□□□ -0.49
LSS-208	ENST00000474319	NAA15	Q9BXJ9	866 aa	Known RBP	11.99	□□□□□ -0.49
LSS-208	ENST00000474319	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.99	□□□□□ -0.49
LSS-208	ENST00000474319	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.99	□□□□□ -0.49
LSS-208	ENST00000474319	RWDD2A	Q9UIY3	292 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.99	□□□□□ -0.49
LSS-208	ENST00000474319	EPHB6	O15197	1021 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	TSPY3	P0CV98	308 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	TSPY8	P0CW00	308 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	NAPA	P54920	295 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	PICALM	Q13492	652 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	STIM1	Q13586	685 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	ANKRD40	Q6AI12	368 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	SH3RF1	Q7Z6J0	888 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	GLIS3	Q8NEA6	775 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	MS4A14	Q96JA4	679 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	CNOT6L	Q96LI5	555 aa	Known RBP	11.99	□□□□□ -0.49
LSS-208	ENST00000474319	EXOC1	Q9NV70	894 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	TMEM260	Q9NX78	707 aa		11.99	□□□□□ -0.49
LSS-208	ENST00000474319	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.99	□□□□□ -0.49
LSS-208	ENST00000474319	ZNF804B	A4D1E1	1349 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.98	□□□□□ -0.49
LSS-208	ENST00000474319	MAP2K7	O14733	419 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	ZEB2	O60315	1214 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	E2F4	Q16254	413 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	CCDC181	Q5TID7	509 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	EXOC4	Q96A65	974 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	DISC1	Q9NRI5	854 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	ZBTB7A	O95365	584 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	SLURP2	P0DP57	97 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	WDR59	Q6PJI9	974 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	RRAGA	Q7L523	313 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	GOLGA5	Q8TBA6	731 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	TOGARAM1	Q9Y4F4	1720 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	CCT5	P48643	541 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	GUCY2F	P51841	1108 aa		11.98	□□□□□ -0.49
LSS-208	ENST00000474319	DDR1	Q08345	913 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms