RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 ZNF713Q8N859 430 aaPredicted RBP12.32□□□□□ -0.44
SP140-208ENST00000473711 RASGRP4Q8TDF6 673 aa12.32□□□□□ -0.44
SP140-208ENST00000473711 CLMNQ96JQ2 1002 aa12.32□□□□□ -0.44
SP140-208ENST00000473711 ZMYND12Q9H0C1 365 aa12.32□□□□□ -0.44
SP140-208ENST00000473711 ZNF408Q9H9D4 720 aa12.32□□□□□ -0.44
SP140-208ENST00000473711 RTEL1Q9NZ71 1219 aa12.32□□□□□ -0.44
SP140-208ENST00000473711 RCOR1Q9UKL0 485 aa12.32□□□□□ -0.44
SP140-208ENST00000473711 VCAM1P19320 739 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 GNA11P29992 359 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 TOB1P50616 345 aaPredicted RBP12.31□□□□□ -0.44
SP140-208ENST00000473711 HMGCS2P54868 508 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 STK38Q15208 465 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 MAP3K11Q16584 847 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 SKOR2Q2VWA4 1001 aaPredicted RBP12.31□□□□□ -0.44
SP140-208ENST00000473711 CCDC174Q6PII3 467 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 PIK3AP1Q6ZUJ8 805 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 FBXO11Q86XK2 927 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 ANKRD13AQ8IZ07 590 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 FAM177A1Q8N128 213 aaPredicted RBP12.31□□□□□ -0.44
SP140-208ENST00000473711 DAGLBQ8NCG7 672 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 TNFRSF25Q93038 417 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 AMNQ9BXJ7 453 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 TANGO6Q9C0B7 1094 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 RPAP3Q9H6T3 665 aaPredicted RBP12.31□□□□□ -0.44
SP140-208ENST00000473711 PCDHA6Q9UN73 950 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 PCDHA8Q9Y5H6 950 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 PCDHA1Q9Y5I3 950 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 DDX49Q9Y6V7 483 aaKnown RBP12.31□□□□□ -0.44
SP140-208ENST00000473711 DOCK1Q14185 1865 aa12.31□□□□□ -0.44
SP140-208ENST00000473711 ESYT2A0FGR8 921 aa12.3□□□□□ -0.44
SP140-208ENST00000473711 TAL1P17542 331 aaPredicted RBP12.3□□□□□ -0.44
SP140-208ENST00000473711 ADCY7P51828 1080 aa12.3□□□□□ -0.44
SP140-208ENST00000473711 SF3A1Q15459 793 aaKnown RBP12.3□□□□□ -0.44
SP140-208ENST00000473711 USH1GQ495M9 461 aa12.3□□□□□ -0.44
SP140-208ENST00000473711 RILPL1Q5EBL4 403 aa12.3□□□□□ -0.44
SP140-208ENST00000473711 JAKMIP3Q5VZ66 844 aa12.3□□□□□ -0.44
SP140-208ENST00000473711 PPP1R18Q6NYC8 613 aa12.3□□□□□ -0.44
SP140-208ENST00000473711 LINC00301Q8NCQ3 95 aa12.3□□□□□ -0.44
SP140-208ENST00000473711 GPT2Q8TD30 523 aa12.3□□□□□ -0.44
SP140-208ENST00000473711 MARVELD3Q96A59 401 aa12.3□□□□□ -0.44
SP140-208ENST00000473711 C12orf42Q96LP6 360 aa12.3□□□□□ -0.44
SP140-208ENST00000473711 SLF1Q9BQI6 1058 aa12.3□□□□□ -0.44
SP140-208ENST00000473711 RANBP17Q9H2T7 1088 aaKnown RBP12.3□□□□□ -0.44
SP140-208ENST00000473711 POLR3EQ9NVU0 708 aa12.3□□□□□ -0.44
SP140-208ENST00000473711 TMOD4Q9NZQ9 345 aa12.3□□□□□ -0.44
SP140-208ENST00000473711 BIN2Q9UBW5 565 aaPredicted RBP12.3□□□□□ -0.44
SP140-208ENST00000473711 NOL7Q9UMY1 257 aaKnown RBP12.3□□□□□ -0.44
SP140-208ENST00000473711 TCHHQ07283 1943 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 CCDC194A0A1B0GVG4 234 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 M0R2N6 131 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 FLOT1O75955 427 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 SLC34A2O95436 690 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 NASPP49321 788 aaPredicted RBP12.29□□□□□ -0.44
SP140-208ENST00000473711 UBE2HP62256 183 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 SH3D19Q5HYK7 790 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 LDLRAD1Q5T700 205 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 ERO1BQ86YB8 467 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 PRPF38AQ8NAV1 312 aaKnown RBP12.29□□□□□ -0.44
SP140-208ENST00000473711 BICD2Q8TD16 824 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 PGBD1Q96JS3 809 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 PSTPIP2Q9H939 334 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 RIC8AQ9NPQ8 531 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 TMEM260Q9NX78 707 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 PCDHB6Q9Y5E3 794 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 ELP1O95163 1332 aa12.29□□□□□ -0.44
SP140-208ENST00000473711 GOLGA6L4A6NEF3 574 aa12.28□□□□□ -0.44
SP140-208ENST00000473711 SPDYE5A6NIY4 337 aa12.28□□□□□ -0.44
SP140-208ENST00000473711 SPTLC2O15270 562 aa12.28□□□□□ -0.44
SP140-208ENST00000473711 YEATS4O95619 227 aa12.28□□□□□ -0.44
SP140-208ENST00000473711 MARCKSP29966 332 aaPredicted RBP12.28□□□□□ -0.44
SP140-208ENST00000473711 ME1P48163 572 aa12.28□□□□□ -0.44
SP140-208ENST00000473711 MRPL12P52815 198 aaKnown RBP12.28□□□□□ -0.44
SP140-208ENST00000473711 PPATQ06203 517 aa12.28□□□□□ -0.44
SP140-208ENST00000473711 SLC39A14Q15043 492 aa12.28□□□□□ -0.44
SP140-208ENST00000473711 ZNF174Q15697 407 aa12.28□□□□□ -0.44
SP140-208ENST00000473711 UBE2SQ16763 222 aa12.28□□□□□ -0.44
SP140-208ENST00000473711 KRT25Q7Z3Z0 450 aa12.28□□□□□ -0.44
SP140-208ENST00000473711 RBM46Q8TBY0 533 aaKnown RBP12.28□□□□□ -0.44
SP140-208ENST00000473711 CUL5Q93034 780 aa12.28□□□□□ -0.44
SP140-208ENST00000473711 SLC10A4Q96EP9 437 aa12.28□□□□□ -0.44
SP140-208ENST00000473711 CTDP1Q9Y5B0 961 aaPredicted RBP12.28□□□□□ -0.44
SP140-208ENST00000473711 USP17L15C9J2P7 530 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 USP17L13C9JLJ4 530 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 USP17L11C9JVI0 530 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 USP17L18D6R9N7 530 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 USP17L22D6RA61 530 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 USP17L17D6RBQ6 530 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 USP17L19D6RCP7 530 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 USP17L20D6RJB6 530 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 WNT7AO00755 349 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 CXCL11O14625 94 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 IRF6O14896 467 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 ZBED4O75132 1171 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 CELF2O95319 508 aaKnown RBP12.27□□□□□ -0.45
SP140-208ENST00000473711 MBD3O95983 291 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 USP17L24Q0WX57 530 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 TRAF1Q13077 416 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 PTPAQ15257 358 aa12.27□□□□□ -0.45
SP140-208ENST00000473711 INF2Q27J81 1249 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms