RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 MTCH2Q9Y6C9 303 aa22.66■■□□□ 1.22
NCKIPSD-209ENST00000470006 TRANK1O15050 2925 aa22.66■■□□□ 1.22
NCKIPSD-209ENST00000470006 GRIN2DO15399 1336 aa22.65■■□□□ 1.22
NCKIPSD-209ENST00000470006 ZBED9Q6R2W3 1325 aa22.65■■□□□ 1.22
NCKIPSD-209ENST00000470006 PTGS1P23219 599 aa22.65■■□□□ 1.22
NCKIPSD-209ENST00000470006 IKQ13123 557 aaPredicted RBP22.65■■□□□ 1.22
NCKIPSD-209ENST00000470006 TTLL4Q14679 1199 aa22.65■■□□□ 1.22
NCKIPSD-209ENST00000470006 EEPD1Q7L9B9 569 aa22.65■■□□□ 1.22
NCKIPSD-209ENST00000470006 ZNF444Q8N0Y2 327 aaPredicted RBP22.65■■□□□ 1.22
NCKIPSD-209ENST00000470006 PUS7LQ9H0K6 701 aaKnown RBP22.65■■□□□ 1.22
NCKIPSD-209ENST00000470006 COG5Q9UP83 839 aa22.65■■□□□ 1.22
NCKIPSD-209ENST00000470006 GNEQ9Y223 722 aaKnown RBP22.65■■□□□ 1.22
NCKIPSD-209ENST00000470006 SMPD1P17405 629 aa22.64■■□□□ 1.21
NCKIPSD-209ENST00000470006 ATP5JP18859 108 aa22.64■■□□□ 1.21
NCKIPSD-209ENST00000470006 LRRC47Q8N1G4 583 aaKnown RBP22.64■■□□□ 1.21
NCKIPSD-209ENST00000470006 CHMP4CQ96CF2 233 aa22.64■■□□□ 1.21
NCKIPSD-209ENST00000470006 HAUS7Q99871 368 aa22.64■■□□□ 1.21
NCKIPSD-209ENST00000470006 GREB1LQ9C091 1923 aaPredicted RBP22.64■■□□□ 1.21
NCKIPSD-209ENST00000470006 SOWAHBA6NEL2 793 aa22.63■■□□□ 1.21
NCKIPSD-209ENST00000470006 HMMRO75330 724 aa22.63■■□□□ 1.21
NCKIPSD-209ENST00000470006 ACTN1P12814 892 aa22.63■■□□□ 1.21
NCKIPSD-209ENST00000470006 KRT40Q6A162 431 aa22.63■■□□□ 1.21
NCKIPSD-209ENST00000470006 FAM133AQ8N9E0 248 aa22.63■■□□□ 1.21
NCKIPSD-209ENST00000470006 ARNTL2Q8WYA1 636 aa22.63■■□□□ 1.21
NCKIPSD-209ENST00000470006 PDGFCQ9NRA1 345 aa22.63■■□□□ 1.21
NCKIPSD-209ENST00000470006 RNF146Q9NTX7 359 aa22.63■■□□□ 1.21
NCKIPSD-209ENST00000470006 DDX49Q9Y6V7 483 aaKnown RBP22.63■■□□□ 1.21
NCKIPSD-209ENST00000470006 TMEM232C9JQI7 657 aa22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 PFKMP08237 780 aa22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 SUPT20HL2P0C7V6 817 aa22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 CYP2C9P11712 490 aa22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 BMP3P12645 472 aa22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 SBK1Q52WX2 424 aa22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 SLFN13Q68D06 897 aa22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 IQSEC1Q6DN90 963 aa22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 PANK1Q8TE04 598 aa22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 HLA-CQ95604 372 aa22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 AGBL1Q96MI9 1066 aa22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 ALDH8A1Q9H2A2 487 aaPredicted RBP22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 ZNF287Q9HBT7 754 aa22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 A1CFQ9NQ94 594 aaKnown RBP22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 TRMT13Q9NUP7 481 aaKnown RBP22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 ARIH1Q9Y4X5 557 aaPredicted RBP22.62■■□□□ 1.21
NCKIPSD-209ENST00000470006 PRDM1O75626 825 aa22.61■■□□□ 1.21
NCKIPSD-209ENST00000470006 FDX1P10109 184 aa22.61■■□□□ 1.21
NCKIPSD-209ENST00000470006 ALAS1P13196 640 aa22.61■■□□□ 1.21
NCKIPSD-209ENST00000470006 KIAA1211Q6ZU35 1233 aa22.61■■□□□ 1.21
NCKIPSD-209ENST00000470006 FBXO16Q8IX29 292 aaPredicted RBP22.61■■□□□ 1.21
NCKIPSD-209ENST00000470006 CEP95Q96GE4 821 aa22.61■■□□□ 1.21
NCKIPSD-209ENST00000470006 TRERF1Q96PN7 1200 aa22.61■■□□□ 1.21
NCKIPSD-209ENST00000470006 KIF28PB7ZC32 967 aa22.6■■□□□ 1.21
NCKIPSD-209ENST00000470006 RAB11FIP3O75154 756 aa22.6■■□□□ 1.21
NCKIPSD-209ENST00000470006 TTLL1O95922 423 aa22.6■■□□□ 1.21
NCKIPSD-209ENST00000470006 POU3F3P20264 500 aaPredicted RBP22.6■■□□□ 1.21
NCKIPSD-209ENST00000470006 MKL1Q969V6 931 aa22.6■■□□□ 1.21
NCKIPSD-209ENST00000470006 STRBPQ96SI9 672 aaKnown RBP22.6■■□□□ 1.21
NCKIPSD-209ENST00000470006 FTOQ9C0B1 505 aaKnown RBP eCLIP22.6■■□□□ 1.21
NCKIPSD-209ENST00000470006 MTMR4Q9NYA4 1195 aa22.6■■□□□ 1.21
NCKIPSD-209ENST00000470006 SCN5AQ14524 2016 aa22.59■■□□□ 1.21
NCKIPSD-209ENST00000470006 EPOPA6NHQ4 379 aa22.59■■□□□ 1.21
NCKIPSD-209ENST00000470006 TLL1O43897 1013 aa22.59■■□□□ 1.21
NCKIPSD-209ENST00000470006 APPP05067 770 aa22.59■■□□□ 1.21
NCKIPSD-209ENST00000470006 TDO2P48775 406 aa22.59■■□□□ 1.21
NCKIPSD-209ENST00000470006 STAT2P52630 851 aa22.59■■□□□ 1.21
NCKIPSD-209ENST00000470006 FAM47CQ5HY64 1035 aa22.59■■□□□ 1.21
NCKIPSD-209ENST00000470006 GMCL1P1Q8NEA9 526 aa22.59■■□□□ 1.21
NCKIPSD-209ENST00000470006 CHURC1Q8WUH1 139 aa22.59■■□□□ 1.21
NCKIPSD-209ENST00000470006 SLC9A7Q96T83 725 aa22.59■■□□□ 1.21
NCKIPSD-209ENST00000470006 GPHNQ9NQX3 736 aaPredicted RBP22.59■■□□□ 1.21
NCKIPSD-209ENST00000470006 Q9Y3F1 56 aa22.59■■□□□ 1.21
NCKIPSD-209ENST00000470006 LRRC37A2A6NM11 1700 aa22.59■■□□□ 1.21
NCKIPSD-209ENST00000470006 TNKSO95271 1327 aa22.58■■□□□ 1.21
NCKIPSD-209ENST00000470006 IGKV6D-41A0A0C4DH26 115 aa22.58■■□□□ 1.21
NCKIPSD-209ENST00000470006 FAM86C2PA6NEL3 165 aa22.58■■□□□ 1.21
NCKIPSD-209ENST00000470006 GSG1L2A8MUP6 293 aa22.58■■□□□ 1.21
NCKIPSD-209ENST00000470006 MYL3P08590 195 aa22.58■■□□□ 1.21
NCKIPSD-209ENST00000470006 TKFCQ3LXA3 575 aa22.58■■□□□ 1.21
NCKIPSD-209ENST00000470006 TMEM63BQ5T3F8 832 aa22.58■■□□□ 1.21
NCKIPSD-209ENST00000470006 TAPT1Q6NXT6 567 aa22.58■■□□□ 1.21
NCKIPSD-209ENST00000470006 RPAP2Q8IXW5 612 aaPredicted RBP22.58■■□□□ 1.21
NCKIPSD-209ENST00000470006 VWCEQ96DN2 955 aa22.58■■□□□ 1.21
NCKIPSD-209ENST00000470006 POLR3EQ9NVU0 708 aa22.58■■□□□ 1.21
NCKIPSD-209ENST00000470006 TSPY3P0CV98 308 aa22.57■■□□□ 1.2
NCKIPSD-209ENST00000470006 TSPY8P0CW00 308 aa22.57■■□□□ 1.2
NCKIPSD-209ENST00000470006 GIMAP6Q6P9H5 292 aa22.57■■□□□ 1.2
NCKIPSD-209ENST00000470006 FAM160B2Q86V87 743 aa22.57■■□□□ 1.2
NCKIPSD-209ENST00000470006 RETREG2Q8NC44 543 aa22.57■■□□□ 1.2
NCKIPSD-209ENST00000470006 SLC1A4P43007 532 aa22.56■■□□□ 1.2
NCKIPSD-209ENST00000470006 SNAP25P60880 206 aa22.56■■□□□ 1.2
NCKIPSD-209ENST00000470006 TAP1Q03518 808 aa22.56■■□□□ 1.2
NCKIPSD-209ENST00000470006 NSMFQ6X4W1 530 aa22.56■■□□□ 1.2
NCKIPSD-209ENST00000470006 PHOSPHO2Q8TCD6 241 aa22.56■■□□□ 1.2
NCKIPSD-209ENST00000470006 VTA1Q9NP79 307 aa22.56■■□□□ 1.2
NCKIPSD-209ENST00000470006 SYNPO2Q9UMS6 1093 aa22.56■■□□□ 1.2
NCKIPSD-209ENST00000470006 RFC2P35250 354 aa22.55■■□□□ 1.2
NCKIPSD-209ENST00000470006 HERC6Q8IVU3 1022 aa22.55■■□□□ 1.2
NCKIPSD-209ENST00000470006 STAG1Q8WVM7 1258 aa22.55■■□□□ 1.2
NCKIPSD-209ENST00000470006 ZNF536O15090 1300 aa22.55■■□□□ 1.2
NCKIPSD-209ENST00000470006 CCER2I3L3R5 266 aa22.54■■□□□ 1.2
NCKIPSD-209ENST00000470006 GPR37L1O60883 481 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms