RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 EPHB4P54760 987 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 C8orf74Q6P047 294 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 CWC25Q9NXE8 425 aaPredicted RBP8.84□□□□□ -0.99
TPM3-215ENST00000469717 LGALS16A8MUM7 142 aa8.83□□□□□ -1
TPM3-215ENST00000469717 SEMA3EO15041 775 aa8.83□□□□□ -1
TPM3-215ENST00000469717 SNRPA1P09661 255 aaKnown RBP8.83□□□□□ -1
TPM3-215ENST00000469717 MCM7P33993 719 aa8.83□□□□□ -1
TPM3-215ENST00000469717 CLNS1AP54105 237 aaKnown RBP8.83□□□□□ -1
TPM3-215ENST00000469717 MAP2K1Q02750 393 aaPredicted RBP8.83□□□□□ -1
TPM3-215ENST00000469717 KIF5AQ12840 1032 aa8.83□□□□□ -1
TPM3-215ENST00000469717 TSR1Q2NL82 804 aaKnown RBP8.83□□□□□ -1
TPM3-215ENST00000469717 CFAP58Q5T655 872 aa8.83□□□□□ -1
TPM3-215ENST00000469717 HELBQ8NG08 1087 aaPredicted RBP8.83□□□□□ -1
TPM3-215ENST00000469717 PLBD2Q8NHP8 589 aa8.83□□□□□ -1
TPM3-215ENST00000469717 ZNF507Q8TCN5 953 aa8.83□□□□□ -1
TPM3-215ENST00000469717 HPS3Q969F9 1004 aa8.83□□□□□ -1
TPM3-215ENST00000469717 UBAC1Q9BSL1 405 aa8.83□□□□□ -1
TPM3-215ENST00000469717 GPR108Q9NPR9 543 aa8.83□□□□□ -1
TPM3-215ENST00000469717 CAPN11Q9UMQ6 739 aa8.83□□□□□ -1
TPM3-215ENST00000469717 DCDC2CA8MYV0 355 aa8.83□□□□□ -1
TPM3-215ENST00000469717 IRF6O14896 467 aa8.83□□□□□ -1
TPM3-215ENST00000469717 UPP2O95045 317 aa8.83□□□□□ -1
TPM3-215ENST00000469717 PLEKHA8P1O95397 391 aa8.83□□□□□ -1
TPM3-215ENST00000469717 STARD3NLO95772 234 aa8.83□□□□□ -1
TPM3-215ENST00000469717 ZFYP08048 801 aaPredicted RBP8.83□□□□□ -1
TPM3-215ENST00000469717 SMTNP53814 917 aa8.83□□□□□ -1
TPM3-215ENST00000469717 CCDC181Q5TID7 509 aa8.83□□□□□ -1
TPM3-215ENST00000469717 PDXDC2PQ6P474 469 aa8.83□□□□□ -1
TPM3-215ENST00000469717 SRCAPQ6ZRS2 3230 aa8.83□□□□□ -1
TPM3-215ENST00000469717 MAATS1Q7Z4T9 603 aa8.83□□□□□ -1
TPM3-215ENST00000469717 FUKQ8N0W3 1084 aa8.83□□□□□ -1
TPM3-215ENST00000469717 IQCKQ8N0W5 287 aa8.83□□□□□ -1
TPM3-215ENST00000469717 MMGT1Q8N4V1 131 aa8.83□□□□□ -1
TPM3-215ENST00000469717 CYFIP2Q96F07 1278 aa8.83□□□□□ -1
TPM3-215ENST00000469717 TMEM87BQ96K49 555 aa8.83□□□□□ -1
TPM3-215ENST00000469717 TRIM47Q96LD4 638 aa8.83□□□□□ -1
TPM3-215ENST00000469717 MAP3K15Q6ZN16 1313 aa8.83□□□□□ -1
TPM3-215ENST00000469717 MYH6P13533 1939 aa8.83□□□□□ -1
TPM3-215ENST00000469717 CCNHP51946 323 aaPredicted RBP8.83□□□□□ -1
TPM3-215ENST00000469717 NAA25Q14CX7 972 aa8.83□□□□□ -1
TPM3-215ENST00000469717 CCDC57Q2TAC2 916 aa8.83□□□□□ -1
TPM3-215ENST00000469717 LRCH2Q5VUJ6 765 aa8.83□□□□□ -1
TPM3-215ENST00000469717 A1CFQ9NQ94 594 aaKnown RBP8.83□□□□□ -1
TPM3-215ENST00000469717 FAM170AA1A519 330 aa8.83□□□□□ -1
TPM3-215ENST00000469717 HEXIM1O94992 359 aaKnown RBP8.83□□□□□ -1
TPM3-215ENST00000469717 MBD4O95243 580 aa8.83□□□□□ -1
TPM3-215ENST00000469717 RPN1P04843 607 aaKnown RBP8.83□□□□□ -1
TPM3-215ENST00000469717 PDE6AP16499 860 aa8.83□□□□□ -1
TPM3-215ENST00000469717 MDH1P40925 334 aaKnown RBP8.83□□□□□ -1
TPM3-215ENST00000469717 SSR1P43307 286 aaKnown RBP8.83□□□□□ -1
TPM3-215ENST00000469717 PHKA1P46020 1223 aa8.83□□□□□ -1
TPM3-215ENST00000469717 KRT83P78385 493 aa8.83□□□□□ -1
TPM3-215ENST00000469717 PARP9Q8IXQ6 854 aa8.83□□□□□ -1
TPM3-215ENST00000469717 MTMR8Q96EF0 704 aa8.83□□□□□ -1
TPM3-215ENST00000469717 SGSM3Q96HU1 749 aa8.83□□□□□ -1
TPM3-215ENST00000469717 RPGRIP1Q96KN7 1286 aa8.83□□□□□ -1
TPM3-215ENST00000469717 NAPBQ9H115 298 aa8.83□□□□□ -1
TPM3-215ENST00000469717 V9GY48 417 aaPredicted RBP8.83□□□□□ -1
TPM3-215ENST00000469717 BCL9LQ86UU0 1499 aa8.83□□□□□ -1
TPM3-215ENST00000469717 EME2A4GXA9 379 aaPredicted RBP8.82□□□□□ -1
TPM3-215ENST00000469717 IPO7O95373 1038 aaKnown RBP8.82□□□□□ -1
TPM3-215ENST00000469717 DEXIO95424 95 aa8.82□□□□□ -1
TPM3-215ENST00000469717 EPB41P11171 864 aaKnown RBP8.82□□□□□ -1
TPM3-215ENST00000469717 CCDC70Q6NSX1 233 aa8.82□□□□□ -1
TPM3-215ENST00000469717 KDM7AQ6ZMT4 941 aa8.82□□□□□ -1
TPM3-215ENST00000469717 DDX42Q86XP3 938 aaKnown RBP eCLIP8.82□□□□□ -1
TPM3-215ENST00000469717 C2CD5Q86YS7 1000 aa8.82□□□□□ -1
TPM3-215ENST00000469717 IFIH1Q9BYX4 1025 aaKnown RBP8.82□□□□□ -1
TPM3-215ENST00000469717 TTYH3Q9C0H2 523 aa8.82□□□□□ -1
TPM3-215ENST00000469717 FAM207AQ9NSI2 230 aaPredicted RBP8.82□□□□□ -1
TPM3-215ENST00000469717 ARHGAP20Q9P2F6 1191 aa8.82□□□□□ -1
TPM3-215ENST00000469717 ARFGEF2Q9Y6D5 1785 aa8.82□□□□□ -1
TPM3-215ENST00000469717 WDR19Q8NEZ3 1342 aa8.82□□□□□ -1
TPM3-215ENST00000469717 NFAT5O94916 1531 aa8.82□□□□□ -1
TPM3-215ENST00000469717 CYLC1P35663 651 aaPredicted RBP8.82□□□□□ -1
TPM3-215ENST00000469717 PEX19P40855 299 aa8.82□□□□□ -1
TPM3-215ENST00000469717 CDR1P51861 262 aa8.82□□□□□ -1
TPM3-215ENST00000469717 TBC1D8BQ0IIM8 1120 aa8.82□□□□□ -1
TPM3-215ENST00000469717 TRIM14Q14142 442 aa8.82□□□□□ -1
TPM3-215ENST00000469717 WTAPQ15007 396 aa8.82□□□□□ -1
TPM3-215ENST00000469717 PKN1Q16512 942 aa8.82□□□□□ -1
TPM3-215ENST00000469717 MEA1Q16626 185 aa8.82□□□□□ -1
TPM3-215ENST00000469717 C6orf89Q6UWU4 347 aa8.82□□□□□ -1
TPM3-215ENST00000469717 DNAAF5Q86Y56 855 aa8.82□□□□□ -1
TPM3-215ENST00000469717 IFNL3Q8IZI9 196 aa8.82□□□□□ -1
TPM3-215ENST00000469717 MIGA1Q8NAN2 632 aa8.82□□□□□ -1
TPM3-215ENST00000469717 FANCBQ8NB91 859 aa8.82□□□□□ -1
TPM3-215ENST00000469717 LRRC15Q8TF66 581 aa8.82□□□□□ -1
TPM3-215ENST00000469717 PURBQ96QR8 312 aaKnown RBP8.82□□□□□ -1
TPM3-215ENST00000469717 STRBPQ96SI9 672 aaKnown RBP8.82□□□□□ -1
TPM3-215ENST00000469717 CEP131Q9UPN4 1083 aa8.82□□□□□ -1
TPM3-215ENST00000469717 GOLGA6L7A0A1B0GV03 622 aa8.82□□□□□ -1
TPM3-215ENST00000469717 GCFC2P16383 781 aaKnown RBP8.82□□□□□ -1
TPM3-215ENST00000469717 VAV2P52735 878 aa8.82□□□□□ -1
TPM3-215ENST00000469717 SNCBQ16143 134 aa8.82□□□□□ -1
TPM3-215ENST00000469717 WLSQ5T9L3 541 aa8.82□□□□□ -1
TPM3-215ENST00000469717 PIK3AP1Q6ZUJ8 805 aa8.82□□□□□ -1
TPM3-215ENST00000469717 ZNF654Q8IZM8 581 aa8.82□□□□□ -1
TPM3-215ENST00000469717 CASKIN2Q8WXE0 1202 aa8.82□□□□□ -1
TPM3-215ENST00000469717 THOC1Q96FV9 657 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms