RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 PPP1R13LQ8WUF5 828 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 HOOK2Q96ED9 719 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 SCLYQ96I15 445 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 RPS6KC1Q96S38 1066 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 MTFR1LQ9H019 292 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 PUS7LQ9H0K6 701 aaKnown RBP4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 PRDM6Q9NQX0 595 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 FAM105AQ9NUU6 356 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 GFOD1Q9NXC2 390 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 SAMD15Q9P1V8 674 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 ZNF180Q9UJW8 692 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 TRHDEQ9UKU6 1024 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 TPX2Q9ULW0 747 aaKnown RBP4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 FHOD1Q9Y613 1164 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 ACTL7BQ9Y614 415 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 GOLGA6CA6NDK9 693 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 GOLGA6BA6NDN3 693 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 TM4SF5O14894 197 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 GAS2O43903 313 aaKnown RBP4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 ZEB2O60315 1214 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 GAS7O60861 476 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 GOLGA6DP0CG33 693 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 NID1P14543 1247 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 POU3F2P20265 443 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 ID4P47928 161 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 GFRA1P56159 465 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 BRD3Q15059 726 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 SKOR2Q2VWA4 1001 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 CWF19L1Q69YN2 538 aaKnown RBP4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 CCSAPQ6IQ19 270 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 ZC3H7AQ8IWR0 971 aaKnown RBP4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 SYTL5Q8TDW5 730 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 DCAF4Q8WV16 495 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 RELTQ969Z4 430 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 GPR101Q96P66 508 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 ASPNQ9BXN1 380 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 PRDM14Q9GZV8 571 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 NKX2-4Q9H2Z4 354 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 GOLGA2P5Q9HBQ8 144 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 CYP26B1Q9NR63 512 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 GOLGA6AQ9NYA3 693 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 USP21Q9UK80 565 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 ZKSCAN5Q9Y2L8 839 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 PCDHA8Q9Y5H6 950 aa4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 ZCCHC6Q5VYS8 1495 aaKnown RBP4.86□□□□□ -1.63
HMGB1P25-201ENST00000468402 A0A0A0MRY4 1105 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 E2F8A0AVK6 867 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 SHOXO15266 292 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 LRRN2O75325 713 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 MYL1P05976 194 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 SRGAP2CP0DJJ0 459 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 NAT1P18440 290 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 CYP7A1P22680 504 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 ITGB7P26010 798 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 RXRBP28702 533 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 POU4F1Q01851 419 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 SCRN1Q12765 414 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 PIN1Q13526 163 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 LRP8Q14114 963 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 NTRK3Q16288 839 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 PTPN21Q16825 1174 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 ZCCHC8Q6NZY4 707 aaKnown RBP4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 KCNT2Q6UVM3 1135 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 C11orf74Q86VG3 221 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 FMR1NBQ8N0W7 255 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 AGGF1Q8N302 714 aaeCLIP4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 NXPE1Q8N323 547 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 DNAJB8Q8NHS0 232 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 RNF141Q8WVD5 230 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 CHMP4CQ96CF2 233 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 MPHOSPH6Q99547 160 aaKnown RBP4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 YIPF2Q9BWQ6 316 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 MRPL18Q9H0U6 180 aaKnown RBP4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 SUGCTQ9HAC7 445 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 CABP5Q9NP86 173 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 IP6K2Q9UHH9 426 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 RNF112Q9ULX5 631 aa4.85□□□□□ -1.63
HMGB1P25-201ENST00000468402 ASXL2Q76L83 1435 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 FAM83GA6ND36 823 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 M0R2C6 588 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 EIF3JO75822 258 aaKnown RBP4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 CD3EP07766 207 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 MYBL2P10244 700 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 ZSCAN20P17040 1043 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 GRB10Q13322 594 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 SNW1Q13573 536 aaKnown RBP4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 MLC1Q15049 377 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 CLEC16AQ2KHT3 1053 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 SYDE2Q5VT97 1194 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 ANKRD34AQ69YU3 496 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 HDGFL2Q7Z4V5 671 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 PPIL6Q8IXY8 311 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 SMC5Q8IY18 1101 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 IFNL3Q8IZI9 196 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 IGSF22Q8N9C0 903 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 C2CD4AQ8NCU7 369 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 TTC8Q8TAM2 541 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 TP53INP1Q96A56 240 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 TRIM11Q96F44 468 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms