RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 MYH6P13533 1939 aa16.86■□□□□ 0.29
SQSTM1-205ENST00000464493 DNAJC25-GNG10A0A024R161 153 aa16.85■□□□□ 0.29
SQSTM1-205ENST00000464493 ZBTB5O15062 677 aa16.85■□□□□ 0.29
SQSTM1-205ENST00000464493 MTFR1Q15390 333 aa16.85■□□□□ 0.29
SQSTM1-205ENST00000464493 ZNF792Q3KQV3 632 aa16.85■□□□□ 0.29
SQSTM1-205ENST00000464493 HOMER1Q86YM7 354 aa16.85■□□□□ 0.29
SQSTM1-205ENST00000464493 SRBD1Q8N5C6 995 aaKnown RBP16.85■□□□□ 0.29
SQSTM1-205ENST00000464493 IL17RAQ96F46 866 aa16.85■□□□□ 0.29
SQSTM1-205ENST00000464493 PIGSQ96S52 555 aa16.85■□□□□ 0.29
SQSTM1-205ENST00000464493 PDRG1Q9NUG6 133 aa16.85■□□□□ 0.29
SQSTM1-205ENST00000464493 PNMA6FA0A0J9YX94 578 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 PLEKHA8P1O95397 391 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 RCAN1P53805 252 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 TRIM32Q13049 653 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 RTN1Q16799 776 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 MFSD14CQ5VZR4 134 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 OLFML2BQ68BL8 750 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 CMTR1Q8N1G2 835 aaKnown RBP16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 CLEC4DQ8WXI8 215 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 MAML3Q96JK9 1138 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 TMEM106CQ9BVX2 250 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 SPZ1Q9BXG8 430 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 AMNQ9BXJ7 453 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 A1CFQ9NQ94 594 aaKnown RBP16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 RBM28Q9NW13 759 aaKnown RBP16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 PFASO15067 1338 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 ABCB11O95342 1321 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 PLXNA1Q9UIW2 1896 aa16.84■□□□□ 0.29
SQSTM1-205ENST00000464493 GOLGA8AA7E2F4 631 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 GOLGA8BA8MQT2 603 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 POTEB2H3BUK9 544 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 NFIBO00712 420 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 CAPN15O75808 1086 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 IGHA2P01877 340 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 CCL5P13501 91 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 BRCA2P51587 3418 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 EVCP57679 992 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 CACNB2Q08289 660 aaPredicted RBP16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 TRAF1Q13077 416 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 TOB2Q14106 344 aaPredicted RBP16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 PPP2R5BQ15173 497 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 NSMFQ6X4W1 530 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 TMTC3Q6ZXV5 915 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 PIBF1Q8WXW3 757 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 RNF208Q9H0X6 261 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 CYP39A1Q9NYL5 469 aa16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 MRPL11Q9Y3B7 192 aaKnown RBP16.83■□□□□ 0.28
SQSTM1-205ENST00000464493 RPTORQ8N122 1335 aa16.82■□□□□ 0.28
SQSTM1-205ENST00000464493 PTPDC1A2A3K4 754 aa16.82■□□□□ 0.28
SQSTM1-205ENST00000464493 PPP1R11O60927 126 aaPredicted RBP16.82■□□□□ 0.28
SQSTM1-205ENST00000464493 PRKAR2AP13861 404 aaKnown RBP16.82■□□□□ 0.28
SQSTM1-205ENST00000464493 CYP2C19P33261 490 aa16.82■□□□□ 0.28
SQSTM1-205ENST00000464493 METAP2P50579 478 aaKnown RBP eCLIP16.82■□□□□ 0.28
SQSTM1-205ENST00000464493 BAATQ14032 418 aaPredicted RBP16.82■□□□□ 0.28
SQSTM1-205ENST00000464493 MAP3K21Q5TCX8 1036 aa16.82■□□□□ 0.28
SQSTM1-205ENST00000464493 CCDC82Q8N4S0 544 aa16.82■□□□□ 0.28
SQSTM1-205ENST00000464493 RGS22Q8NE09 1264 aa16.82■□□□□ 0.28
SQSTM1-205ENST00000464493 RRP36Q96EU6 259 aaKnown RBP16.82■□□□□ 0.28
SQSTM1-205ENST00000464493 UNC93B1Q9H1C4 597 aa16.82■□□□□ 0.28
SQSTM1-205ENST00000464493 HMX1Q9NP08 348 aaPredicted RBP16.82■□□□□ 0.28
SQSTM1-205ENST00000464493 PCDHA1Q9Y5I3 950 aa16.82■□□□□ 0.28
SQSTM1-205ENST00000464493 CCDC196A0A1B0GTZ2 297 aa16.81■□□□□ 0.28
SQSTM1-205ENST00000464493 CNTN2Q02246 1040 aa16.81■□□□□ 0.28
SQSTM1-205ENST00000464493 RNF207Q6ZRF8 634 aa16.81■□□□□ 0.28
SQSTM1-205ENST00000464493 ZNF467Q7Z7K2 595 aaPredicted RBP16.81■□□□□ 0.28
SQSTM1-205ENST00000464493 MCF2L2Q86YR7 1114 aa16.81■□□□□ 0.28
SQSTM1-205ENST00000464493 MSL3Q8N5Y2 521 aaKnown RBP16.81■□□□□ 0.28
SQSTM1-205ENST00000464493 FAM133AQ8N9E0 248 aa16.81■□□□□ 0.28
SQSTM1-205ENST00000464493 TINF2Q9BSI4 451 aa16.81■□□□□ 0.28
SQSTM1-205ENST00000464493 C22orf23Q9BZE7 217 aa16.81■□□□□ 0.28
SQSTM1-205ENST00000464493 ALDH8A1Q9H2A2 487 aaPredicted RBP16.81■□□□□ 0.28
SQSTM1-205ENST00000464493 FAM217BQ9NTX9 383 aaPredicted RBP16.81■□□□□ 0.28
SQSTM1-205ENST00000464493 SEC63Q9UGP8 760 aaKnown RBP16.81■□□□□ 0.28
SQSTM1-205ENST00000464493 KIAA0100Q14667 2235 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-205ENST00000464493 PDIA3P30101 505 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-205ENST00000464493 CDC27P30260 824 aa16.8■□□□□ 0.28
SQSTM1-205ENST00000464493 ADD1P35611 737 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-205ENST00000464493 SOX10P56693 466 aa16.8■□□□□ 0.28
SQSTM1-205ENST00000464493 MAMDC4Q6UXC1 1216 aa16.8■□□□□ 0.28
SQSTM1-205ENST00000464493 ZNF274Q96GC6 653 aaPredicted RBP16.8■□□□□ 0.28
SQSTM1-205ENST00000464493 LARP6Q9BRS8 491 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-205ENST00000464493 MAF1Q9H063 256 aa16.8■□□□□ 0.28
SQSTM1-205ENST00000464493 UPF2Q9HAU5 1272 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-205ENST00000464493 POTEFA5A3E0 1075 aa16.79■□□□□ 0.28
SQSTM1-205ENST00000464493 SOWAHBA6NEL2 793 aa16.79■□□□□ 0.28
SQSTM1-205ENST00000464493 GJB1P08034 283 aa16.79■□□□□ 0.28
SQSTM1-205ENST00000464493 CALML3P27482 149 aa16.79■□□□□ 0.28
SQSTM1-205ENST00000464493 NEK4P51957 841 aa16.79■□□□□ 0.28
SQSTM1-205ENST00000464493 RPS6P62753 249 aaKnown RBP16.79■□□□□ 0.28
SQSTM1-205ENST00000464493 ANKRD1Q15327 319 aa16.79■□□□□ 0.28
SQSTM1-205ENST00000464493 IFFO2Q5TF58 517 aa16.79■□□□□ 0.28
SQSTM1-205ENST00000464493 TBC1D5Q92609 795 aa16.79■□□□□ 0.28
SQSTM1-205ENST00000464493 FGD4Q96M96 766 aa16.79■□□□□ 0.28
SQSTM1-205ENST00000464493 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.79■□□□□ 0.285e-9■■■■□ 21.6
SQSTM1-205ENST00000464493 PAK6Q9NQU5 681 aaPredicted RBP16.79■□□□□ 0.28
SQSTM1-205ENST00000464493 NID2Q14112 1375 aa16.78■□□□□ 0.28
SQSTM1-205ENST00000464493 SYNGAP1Q96PV0 1343 aa16.78■□□□□ 0.28
SQSTM1-205ENST00000464493 hCG_1642624A0A1W2PR95 340 aa16.78■□□□□ 0.28
SQSTM1-205ENST00000464493 CCND3P30281 292 aaPredicted RBP16.78■□□□□ 0.28
SQSTM1-205ENST00000464493 RBM25P49756 843 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms