RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 ADORA2AP29274 412 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 PDIA3P30101 505 aaKnown RBP7.37□□□□□ -1.23
SF3B1-206ENST00000462613 FLT3LGP49771 235 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 AK2P54819 239 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 EVCP57679 992 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 UBXN2AP68543 259 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 CCT2P78371 535 aaKnown RBP7.37□□□□□ -1.23
SF3B1-206ENST00000462613 SSRP1Q08945 709 aaKnown RBP7.37□□□□□ -1.23
SF3B1-206ENST00000462613 MAP2K5Q13163 448 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 STK3Q13188 491 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 IRF5Q13568 498 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 SLC9C1Q4G0N8 1177 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 NSMFQ6X4W1 530 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 NOL8Q76FK4 1167 aaKnown RBP7.37□□□□□ -1.23
SF3B1-206ENST00000462613 SLAIN1Q8ND83 568 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 REPS2Q8NFH8 660 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 PIBF1Q8WXW3 757 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 AGBL1Q96MI9 1066 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 PIGSQ96S52 555 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 APBA2Q99767 749 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 RNF26Q9BY78 433 aaPredicted RBP7.37□□□□□ -1.23
SF3B1-206ENST00000462613 ARHGAP39Q9C0H5 1083 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 GLT8D2Q9H1C3 349 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 CPVLQ9H3G5 476 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 JMJD4Q9H9V9 463 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 MAP3K20Q9NYL2 800 aaKnown RBP7.37□□□□□ -1.23
SF3B1-206ENST00000462613 ADD3Q9UEY8 706 aaKnown RBP7.37□□□□□ -1.23
SF3B1-206ENST00000462613 BRPF3Q9ULD4 1205 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 LIMCH1Q9UPQ0 1083 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 PTPN22Q9Y2R2 807 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 KIF3AQ9Y496 699 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 PCDHA1Q9Y5I3 950 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 MYH7BA7E2Y1 1941 aa7.37□□□□□ -1.23
SF3B1-206ENST00000462613 ZNF536O15090 1300 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 POTEB2H3BUK9 544 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 ADCY3O60266 1144 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 PLEKHA8P1O95397 391 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 XRCC5P13010 732 aaKnown RBP7.36□□□□□ -1.23
SF3B1-206ENST00000462613 IFNAR1P17181 557 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 GRK4P32298 578 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 SNAP25P60880 206 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 PRKCZQ05513 592 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 GRB14Q14449 540 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 MFSD14CQ5VZR4 134 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 RNF207Q6ZRF8 634 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.36□□□□□ -1.23
SF3B1-206ENST00000462613 HEATR3Q7Z4Q2 680 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 TEX2Q8IWB9 1127 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 SRBD1Q8N5C6 995 aaKnown RBP7.36□□□□□ -1.23
SF3B1-206ENST00000462613 CCDC148Q8NFR7 591 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 PXYLP1Q8TE99 480 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 WASF1Q92558 559 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 MTMR8Q96EF0 704 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 SLC26A6Q9BXS9 759 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 EHMT1Q9H9B1 1298 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 DIS3Q9Y2L1 958 aaKnown RBP7.36□□□□□ -1.23
SF3B1-206ENST00000462613 RIPK3Q9Y572 518 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 PCNTO95613 3336 aa7.36□□□□□ -1.23
SF3B1-206ENST00000462613 LCTP09848 1927 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 CNTNAP5Q8WYK1 1306 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 LOC102724159A0A0B4J2E5 919 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 ASB14A6NK59 587 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 PRPF3O43395 683 aaKnown RBP7.35□□□□□ -1.23
SF3B1-206ENST00000462613 CYTH3O43739 400 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 PEX10O60683 326 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 PFKFB2O60825 505 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 DEXIO95424 95 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 CFBP00751 764 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 HMGCRP04035 888 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 HOXC6P09630 235 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 SCG2P13521 617 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 GNA11P29992 359 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 ADD1P35611 737 aaKnown RBP7.35□□□□□ -1.23
SF3B1-206ENST00000462613 NAPAP54920 295 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 COL9A3Q14050 684 aaPredicted RBP7.35□□□□□ -1.23
SF3B1-206ENST00000462613 TRIM29Q14134 588 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 PWP2Q15269 919 aaKnown RBP7.35□□□□□ -1.23
SF3B1-206ENST00000462613 MORN1Q5T089 497 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 PPP1R18Q6NYC8 613 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 FAM177A1Q8N128 213 aaPredicted RBP7.35□□□□□ -1.23
SF3B1-206ENST00000462613 CMTR1Q8N1G2 835 aaKnown RBP7.35□□□□□ -1.23
SF3B1-206ENST00000462613 MSL3Q8N5Y2 521 aaKnown RBP7.35□□□□□ -1.23
SF3B1-206ENST00000462613 RGS22Q8NE09 1264 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 SMARCC2Q8TAQ2 1214 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 BICD2Q8TD16 824 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 LARP6Q9BRS8 491 aaKnown RBP7.35□□□□□ -1.23
SF3B1-206ENST00000462613 A1CFQ9NQ94 594 aaKnown RBP7.35□□□□□ -1.23
SF3B1-206ENST00000462613 TPCN1Q9ULQ1 816 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 CNPY2Q9Y2B0 182 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 PTCH2Q9Y6C5 1203 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 V9GY48 417 aaPredicted RBP7.35□□□□□ -1.23
SF3B1-206ENST00000462613 FRMPD3Q5JV73 1810 aa7.35□□□□□ -1.23
SF3B1-206ENST00000462613 STK36Q9NRP7 1315 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 SPDYE3A6NKU9 549 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 GCOM1H8Y6P7 765 aaPredicted RBP7.34□□□□□ -1.23
SF3B1-206ENST00000462613 NFIBO00712 420 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 HSP90AA1P07900 732 aaKnown RBP7.34□□□□□ -1.23
SF3B1-206ENST00000462613 POLR2MP0CAP2 368 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 CALML3P27482 149 aa7.34□□□□□ -1.23
SF3B1-206ENST00000462613 CDC27P30260 824 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms