RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 RNF180Q86T96 592 aa20.46■□□□□ 0.87
SCARNA2-201ENST00000458748 MPHOSPH6Q99547 160 aaKnown RBP20.46■□□□□ 0.87
SCARNA2-201ENST00000458748 ANO2Q9NQ90 1003 aa20.46■□□□□ 0.87
SCARNA2-201ENST00000458748 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.46■□□□□ 0.87
SCARNA2-201ENST00000458748 ADD3Q9UEY8 706 aaKnown RBP20.46■□□□□ 0.87
SCARNA2-201ENST00000458748 ZHX1Q9UKY1 873 aaPredicted RBP20.46■□□□□ 0.87
SCARNA2-201ENST00000458748 CDC45O75419 566 aa20.45■□□□□ 0.86
SCARNA2-201ENST00000458748 ACVR2BQ13705 512 aa20.45■□□□□ 0.86
SCARNA2-201ENST00000458748 WTAPQ15007 396 aa20.45■□□□□ 0.86
SCARNA2-201ENST00000458748 CYB5R4Q7L1T6 521 aa20.45■□□□□ 0.86
SCARNA2-201ENST00000458748 ARMCX2Q7L311 632 aa20.45■□□□□ 0.86
SCARNA2-201ENST00000458748 MAF1Q9H063 256 aa20.45■□□□□ 0.86
SCARNA2-201ENST00000458748 MYCNP04198 464 aaPredicted RBP20.44■□□□□ 0.86
SCARNA2-201ENST00000458748 BMP8BP34820 402 aa20.44■□□□□ 0.86
SCARNA2-201ENST00000458748 MAGEA10P43363 369 aaPredicted RBP20.44■□□□□ 0.86
SCARNA2-201ENST00000458748 CNTN2Q02246 1040 aa20.44■□□□□ 0.86
SCARNA2-201ENST00000458748 SEC23AQ15436 765 aa20.44■□□□□ 0.86
SCARNA2-201ENST00000458748 MUM1L1Q5H9M0 696 aa20.44■□□□□ 0.86
SCARNA2-201ENST00000458748 ERICH6BQ5W0A0 696 aa20.44■□□□□ 0.86
SCARNA2-201ENST00000458748 CCDC144CPQ8IYA2 1237 aa20.44■□□□□ 0.86
SCARNA2-201ENST00000458748 MTA3Q9BTC8 594 aa20.44■□□□□ 0.86
SCARNA2-201ENST00000458748 LSG1Q9H089 658 aaKnown RBP20.44■□□□□ 0.86
SCARNA2-201ENST00000458748 SPC25Q9HBM1 224 aa20.44■□□□□ 0.86
SCARNA2-201ENST00000458748 CYP39A1Q9NYL5 469 aa20.44■□□□□ 0.86
SCARNA2-201ENST00000458748 LOC102724159A0A0B4J2E5 919 aa20.43■□□□□ 0.86
SCARNA2-201ENST00000458748 PTPDC1A2A3K4 754 aa20.43■□□□□ 0.86
SCARNA2-201ENST00000458748 B4DLN1 442 aa20.43■□□□□ 0.86
SCARNA2-201ENST00000458748 DUSP11O75319 330 aaKnown RBP20.43■□□□□ 0.86
SCARNA2-201ENST00000458748 MRPL12P52815 198 aaKnown RBP20.43■□□□□ 0.86
SCARNA2-201ENST00000458748 TRAF1Q13077 416 aa20.43■□□□□ 0.86
SCARNA2-201ENST00000458748 PWP2Q15269 919 aaKnown RBP20.43■□□□□ 0.86
SCARNA2-201ENST00000458748 SLC39A5Q6ZMH5 540 aa20.43■□□□□ 0.86
SCARNA2-201ENST00000458748 LRCH3Q96II8 777 aa20.43■□□□□ 0.86
SCARNA2-201ENST00000458748 TSEN34Q9BSV6 310 aaKnown RBP20.43■□□□□ 0.86
SCARNA2-201ENST00000458748 UBA5Q9GZZ9 404 aa20.43■□□□□ 0.86
SCARNA2-201ENST00000458748 PHF24Q9UPV7 400 aa20.43■□□□□ 0.86
SCARNA2-201ENST00000458748 SOWAHBA6NEL2 793 aa20.42■□□□□ 0.86
SCARNA2-201ENST00000458748 MCM5P33992 734 aa20.42■□□□□ 0.86
SCARNA2-201ENST00000458748 ADCYAP1R1P41586 468 aa20.42■□□□□ 0.86
SCARNA2-201ENST00000458748 SNX17Q15036 470 aa20.42■□□□□ 0.86
SCARNA2-201ENST00000458748 CDC37Q16543 378 aaPredicted RBP20.42■□□□□ 0.86
SCARNA2-201ENST00000458748 TMEM67Q5HYA8 995 aa20.42■□□□□ 0.86
SCARNA2-201ENST00000458748 C1orf53Q5VUE5 145 aa20.42■□□□□ 0.86
SCARNA2-201ENST00000458748 RNF207Q6ZRF8 634 aa20.42■□□□□ 0.86
SCARNA2-201ENST00000458748 CATIPQ7Z7H3 387 aa20.42■□□□□ 0.86
SCARNA2-201ENST00000458748 ADGRF4Q8IZF3 695 aa20.42■□□□□ 0.86
SCARNA2-201ENST00000458748 TMTC2Q8N394 836 aa20.42■□□□□ 0.86
SCARNA2-201ENST00000458748 ADAMTS4O75173 837 aa20.41■□□□□ 0.86
SCARNA2-201ENST00000458748 PGK1P00558 417 aa20.41■□□□□ 0.86
SCARNA2-201ENST00000458748 ATN1P54259 1190 aaPredicted RBP20.41■□□□□ 0.86
SCARNA2-201ENST00000458748 CCDC144BQ3MJ40 725 aa20.41■□□□□ 0.86
SCARNA2-201ENST00000458748 MCF2L2Q86YR7 1114 aa20.41■□□□□ 0.86
SCARNA2-201ENST00000458748 RGS22Q8NE09 1264 aa20.41■□□□□ 0.86
SCARNA2-201ENST00000458748 KATNBL1Q9H079 304 aa20.41■□□□□ 0.86
SCARNA2-201ENST00000458748 ABCB11O95342 1321 aa20.41■□□□□ 0.86
SCARNA2-201ENST00000458748 LCTP09848 1927 aa20.41■□□□□ 0.86
SCARNA2-201ENST00000458748 KLRF2D3W0D1 207 aa20.4■□□□□ 0.86
SCARNA2-201ENST00000458748 SLC27A2O14975 620 aa20.4■□□□□ 0.86
SCARNA2-201ENST00000458748 RTP1P59025 263 aa20.4■□□□□ 0.86
SCARNA2-201ENST00000458748 BAATQ14032 418 aaPredicted RBP20.4■□□□□ 0.86
SCARNA2-201ENST00000458748 USH1GQ495M9 461 aa20.4■□□□□ 0.86
SCARNA2-201ENST00000458748 CREB3L3Q68CJ9 461 aa20.4■□□□□ 0.86
SCARNA2-201ENST00000458748 FBXO11Q86XK2 927 aa20.4■□□□□ 0.86
SCARNA2-201ENST00000458748 MB21D2Q8IYB1 491 aaPredicted RBP20.4■□□□□ 0.86
SCARNA2-201ENST00000458748 TMEM87BQ96K49 555 aa20.4■□□□□ 0.86
SCARNA2-201ENST00000458748 SYNRGQ9UMZ2 1314 aa20.4■□□□□ 0.86
SCARNA2-201ENST00000458748 MYH6P13533 1939 aa20.39■□□□□ 0.86
SCARNA2-201ENST00000458748 SZT2Q5T011 3432 aa20.39■□□□□ 0.86
SCARNA2-201ENST00000458748 NFIBO00712 420 aa20.39■□□□□ 0.85
SCARNA2-201ENST00000458748 CALML3P27482 149 aa20.39■□□□□ 0.85
SCARNA2-201ENST00000458748 CST5P28325 142 aaPredicted RBP20.39■□□□□ 0.85
SCARNA2-201ENST00000458748 NECTIN1Q15223 517 aa20.39■□□□□ 0.85
SCARNA2-201ENST00000458748 STOX1Q6ZVD7 989 aa20.39■□□□□ 0.85
SCARNA2-201ENST00000458748 SKAP1Q86WV1 359 aa20.39■□□□□ 0.85
SCARNA2-201ENST00000458748 KLHDC9Q8NEP7 349 aa20.39■□□□□ 0.85
SCARNA2-201ENST00000458748 MORC4Q8TE76 937 aa20.39■□□□□ 0.85
SCARNA2-201ENST00000458748 CLEC4DQ8WXI8 215 aa20.39■□□□□ 0.85
SCARNA2-201ENST00000458748 UBE2OQ9C0C9 1292 aaKnown RBP20.39■□□□□ 0.85
SCARNA2-201ENST00000458748 UPF3AQ9H1J1 476 aaKnown RBP20.39■□□□□ 0.85
SCARNA2-201ENST00000458748 VAT1LQ9HCJ6 419 aa20.39■□□□□ 0.85
SCARNA2-201ENST00000458748 MRPL11Q9Y3B7 192 aaKnown RBP20.39■□□□□ 0.85
SCARNA2-201ENST00000458748 ASTN1O14525 1302 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 MOXD2PA6NHM9 499 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 PRC1O43663 620 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 KIF5BP33176 963 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 NKX3-2P78367 333 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 MDM2Q00987 491 aaPredicted RBP20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 GRM4Q14833 912 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 NFXL1Q6ZNB6 911 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 NOL8Q76FK4 1167 aaKnown RBP20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 PCSK9Q8NBP7 692 aaKnown RBP20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 DNERQ8NFT8 737 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 NUP133Q8WUM0 1156 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 FERMT2Q96AC1 680 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 LENG1Q96BZ8 264 aaPredicted RBP20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 AMNQ9BXJ7 453 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 CPVLQ9H3G5 476 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 JMJD4Q9H9V9 463 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 VTA1Q9NP79 307 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 PRKAG2Q9UGJ0 569 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms