RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 PDXDC1Q6P996 788 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 ERMP1Q7Z2K6 904 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 CPXCR1Q8N123 301 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 MFSD4AQ8N468 514 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 MFSD2AQ8NA29 543 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 ATL2Q8NHH9 583 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 CHAC2Q8WUX2 184 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 COX4I2Q96KJ9 171 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 SRRTQ9BXP5 876 aaKnown RBP4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 ALDH8A1Q9H2A2 487 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 PRDM7Q9NQW5 492 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 ZIM2Q9NZV7 527 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 LUZP4Q9P127 313 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 STRIP2Q9ULQ0 834 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 GTF2A1LQ9UNN4 478 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 CTNND2Q9UQB3 1225 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 TACC3Q9Y6A5 838 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 DBX1A6NMT0 343 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 F2P00734 622 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 HSP90AB1P08238 724 aaKnown RBP4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 EIF4BP23588 611 aaKnown RBP4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 HTR3AP46098 478 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 IFRD2Q12894 506 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 TAF1CQ15572 869 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 NKG7Q16617 165 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 HYIQ5T013 277 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 SFRP5Q5T4F7 317 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 TTBK2Q6IQ55 1244 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 THNSL2Q86YJ6 484 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 HID1Q8IV36 788 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 SYNPOQ8N3V7 929 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 JMYQ8N9B5 988 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 MIPEPQ99797 713 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 SELENOOQ9BVL4 669 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 CHMP4BQ9H444 224 aaKnown RBP4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 COPRSQ9NQ92 184 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 SEMA3GQ9NS98 782 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 FAM53CQ9NYF3 392 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 PRKAG3Q9UGI9 489 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 FBXO2Q9UK22 296 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 PLAAQ9Y263 795 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 DAAM1Q9Y4D1 1078 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 CAPN6Q9Y6Q1 641 aa4.82□□□□□ -1.64
HMGB3P30-201ENST00000457863 PRR33A8MZF0 331 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 CST3P01034 146 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 IFIT2P09913 472 aaKnown RBP4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 STAT3P40763 770 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 SARSP49591 514 aaKnown RBP4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 PPM1FP49593 454 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 GEMIN4P57678 1058 aaKnown RBP4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 PURAQ00577 322 aaKnown RBP4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 NFKB2Q00653 900 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 MESP2Q0VG99 397 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 KCNMB1Q16558 191 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 SLC4A8Q2Y0W8 1093 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 TM4SF20Q53R12 229 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 NXNQ6DKJ4 435 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 THAP5Q7Z6K1 395 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 DGKHQ86XP1 1220 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 TCEAL8Q8IYN2 117 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 PPHLN1Q8NEY8 458 aaKnown RBP4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 RSPH1Q8WYR4 309 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 TRMT2BQ96GJ1 504 aaKnown RBP4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 FAM84AQ96KN4 292 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 SPON2Q9BUD6 331 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 CAAP1Q9H8G2 361 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 GINM1Q9NU53 330 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 MCM8Q9UJA3 840 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 EFR3BQ9Y2G0 817 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 SLC45A1Q9Y2W3 748 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 RABGAP1Q9Y3P9 1069 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 R3HCC1Q9Y3T6 440 aaKnown RBP4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 ST14Q9Y5Y6 855 aa4.81□□□□□ -1.64
HMGB3P30-201ENST00000457863 KLRG2A4D1S0 409 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 ZNF503-AS2A6NEH8 195 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 PRSS47A8MTI9 375 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 FAM155AB1AL88 458 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 PDPK1O15530 556 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 ORC4O43929 436 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 ASMTLO95671 621 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 CT47B1P0C2W7 299 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 TGFB3P10600 412 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 TRIM27P14373 513 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 HALP42357 657 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 AFMP43652 599 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 SOX9P48436 509 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 GUCY2FP51841 1108 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 NEK2P51955 445 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 ETF1P62495 437 aaKnown RBP4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 RASGRF1Q13972 1273 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 MLC1Q15049 377 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 ZNF124Q15973 351 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 PKN1Q16512 942 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 GLIPR1L2Q4G1C9 344 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 CCDC92Q53HC0 331 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 C2orf27AQ580R0 203 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 FAM102BQ5T8I3 360 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 LETMD1Q6P1Q0 360 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms