RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 HTATSF1O43719 755 aaKnown RBP6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 PQBP1O60828 265 aaKnown RBP6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 ADD1P35611 737 aaKnown RBP6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 RGS2P41220 211 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 CRKP46108 304 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 SCTRP47872 440 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 CLDN10P78369 228 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 TAP1Q03518 808 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 USP17L24Q0WX57 530 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 AIMP1Q12904 312 aaKnown RBP6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 GRIK5Q16478 980 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 PSRC1Q6PGN9 363 aaPredicted RBP6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 FRMD5Q7Z6J6 570 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 SUGP1Q8IWZ8 645 aaKnown RBP6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 FAM200AQ8TCP9 573 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 NKD2Q969F2 451 aaPredicted RBP6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 TSEN34Q9BSV6 310 aaKnown RBP6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 GMPR2Q9P2T1 348 aaKnown RBP6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 JAG2Q9Y219 1238 aa6.87□□□□□ -1.31
SBDSP1-204ENST00000453858 AKAP13Q12802 2813 aa6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 KBTBD13C9JR72 458 aa6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 CA3P07451 260 aa6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 CYBAP13498 195 aa6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 PTGIRP43119 386 aa6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 SEC13P55735 322 aa6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 MAP3K10Q02779 954 aa6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 APOBEC3HQ6NTF7 200 aaKnown RBP6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 CCDC174Q6PII3 467 aa6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 SPRED2Q7Z698 418 aa6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 ASIC4Q96FT7 647 aa6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 APBA2Q99767 749 aa6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 ASCC2Q9H1I8 757 aaPredicted RBP6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 PORCNQ9H237 461 aa6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 IL23AQ9NPF7 189 aa6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 RBPJLQ9UBG7 517 aa6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 TTF2Q9UNY4 1162 aaKnown RBP6.86□□□□□ -1.31
SBDSP1-204ENST00000453858 PDE8AO60658 829 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 FGBP02675 491 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 HOXC6P09630 235 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 CNGA1P29973 690 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 CYP2C19P33261 490 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 CDK7P50613 346 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 COL19A1Q14993 1142 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 SWI5Q1ZZU3 235 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 CRTC2Q53ET0 693 aaPredicted RBP6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 MFSD14CQ5VZR4 134 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 ANO1Q5XXA6 986 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 GPR142Q7Z601 462 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 MEIOBQ8N635 442 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 PLBD2Q8NHP8 589 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 ARNTL2Q8WYA1 636 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 EDC3Q96F86 508 aaKnown RBP6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 MRIQ9BWK5 157 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 ZFAND3Q9H8U3 227 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 PANK3Q9H999 370 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 NOVA2Q9UNW9 492 aaKnown RBP6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 PHIPQ8WWQ0 1821 aa6.85□□□□□ -1.31
SBDSP1-204ENST00000453858 CNOT1A5YKK6 2376 aaKnown RBP6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 MAPK4P31152 587 aa6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 ZXDAP98168 799 aa6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 HDLBPQ00341 1268 aaKnown RBP6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 TMEM67Q5HYA8 995 aa6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 OTOP2Q7RTS6 562 aa6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 SCYL3Q8IZE3 742 aa6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 CRACR2BQ8N4Y2 399 aaPredicted RBP6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 GPRC5AQ8NFJ5 357 aa6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 TTLL11Q8NHH1 800 aa6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 TPCN2Q8NHX9 752 aa6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 XAGE2Q96GT9 111 aa6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 SENP2Q9HC62 589 aa6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 ATP13A2Q9NQ11 1180 aa6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 DBF4Q9UBU7 674 aaPredicted RBP6.84□□□□□ -1.31
SBDSP1-204ENST00000453858 RELNP78509 3460 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 SMCHD1A6NHR9 2005 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 A0A1W2PQ45 241 aaPredicted RBP6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 A0A1W2PQY0 241 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 TRIM75PA6NK02 468 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 DCDC2CA8MYV0 355 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 H3BQ06 376 aaPredicted RBP6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 SEPT4O43236 478 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 DKK1O94907 266 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 EIF2S2P20042 333 aaKnown RBP6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 GPC1P35052 558 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 GDF10P55107 478 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 DPYDQ12882 1025 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 CBLBQ13191 982 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 CLN3Q13286 438 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 PLEKHH3Q7Z736 793 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 KIAA2013Q8IYS2 634 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 TMEM199Q8N511 208 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 NPLOC4Q8TAT6 608 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 PNISRQ8TF01 805 aaKnown RBP6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 FAM151AQ8WW52 585 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 RTF1Q92541 710 aaKnown RBP6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 ZNF594Q96JF6 807 aaPredicted RBP6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 ZDHHC15Q96MV8 337 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 CDC5LQ99459 802 aaKnown RBP6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 ESYT1Q9BSJ8 1104 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 GREM2Q9H772 168 aa6.83□□□□□ -1.32
SBDSP1-204ENST00000453858 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms