RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 MYO1AQ9UBC5 1043 aa15□□□□□ -0.01
SYNGAP1-204ENST00000449372 RPS6KL1Q9Y6S9 549 aa15□□□□□ -0.01
SYNGAP1-204ENST00000449372 ZEB2O60315 1214 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 ZMYND10O75800 440 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 SLC8A1P32418 973 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 IQCEQ6IPM2 695 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 SGMS1Q86VZ5 419 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 FAM228AQ86W67 206 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 SPDYE1Q8NFV5 336 aaPredicted RBP14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 SETDB2Q96T68 719 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 RTCBQ9Y3I0 505 aaKnown RBP14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 CCDC88AQ3V6T2 1871 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 GOLGA6L7A0A1B0GV03 622 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 KLRK1P26718 216 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 POSTNQ15063 836 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 TMEM67Q5HYA8 995 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 BICDL1Q6ZP65 573 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 MAB21L3Q8N8X9 362 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 MAGEC3Q8TD91 643 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 LY9Q9HBG7 655 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 FAM217BQ9NTX9 383 aaPredicted RBP14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 BAZ2AQ9UIF9 1905 aaKnown RBP14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 DUOX1Q9NRD9 1551 aa14.99□□□□□ -0.01
SYNGAP1-204ENST00000449372 GOLGA8KD6RF30 607 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 SEMA3EO15041 775 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 GNAT2P19087 354 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 NAP1L1P55209 391 aaKnown RBP14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 RAD9BQ6WBX8 426 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 GSPT2Q8IYD1 628 aaKnown RBP14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 ZNF579Q8NAF0 562 aaKnown RBP14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 MTA3Q9BTC8 594 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 LTBP1Q14766 1721 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 IFT88Q13099 833 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 EHBP1Q8NDI1 1231 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 BATF3Q9NR55 127 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 HPSEQ9Y251 543 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 NFE2L3Q9Y4A8 694 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 HSPA1LP34931 641 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 RPS8P62241 208 aaKnown RBP14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 NTRK3Q16288 839 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 CDCA2Q69YH5 1023 aaPredicted RBP14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 OTUD7BQ6GQQ9 843 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 CERKQ8TCT0 537 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 TPX2Q9ULW0 747 aaKnown RBP14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 B4E1Z4 1266 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 ARMC3Q5W041 872 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 PIK3R5Q8WYR1 880 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 ZSWIM5Q9P217 1185 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 ANAPC4Q9UJX5 808 aa14.98□□□□□ -0.01
SYNGAP1-204ENST00000449372 FUKQ8N0W3 1084 aa14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 IFIT3O14879 490 aaKnown RBP14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 ZPR1O75312 459 aa14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 LIFRP42702 1097 aa14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 NAA35Q5VZE5 725 aa14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 TMTC1Q8IUR5 882 aa14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 NLRP3Q96P20 1036 aa14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 PCDHA5Q9Y5H7 936 aa14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 LRRC37AA6NMS7 1700 aa14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 RCAN1P53805 252 aa14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 CTDSPL2Q05D32 466 aa14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 PDCD2Q16342 344 aaPredicted RBP14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 APOA5Q6Q788 366 aa14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 CCDC47Q96A33 483 aaKnown RBP14.97□□□□□ -0.01
SYNGAP1-204ENST00000449372 PLCD1P51178 756 aa14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 PNOCQ13519 176 aa14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 AKNAD1Q5T1N1 836 aa14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 TPTE2Q6XPS3 522 aa14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 MICU3Q86XE3 530 aa14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 NOSTRINQ8IVI9 506 aa14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 SEPT12Q8IYM1 358 aa14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 NAPBQ9H115 298 aa14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 OPA1O60313 960 aa14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 CDC27P30260 824 aa14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 SKOR1P84550 965 aa14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 SLC26A6Q9BXS9 759 aa14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 FOXP1Q9H334 677 aaPredicted RBP14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 HOMER3Q9NSC5 361 aa14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 TAOK2Q9UL54 1235 aa14.96□□□□□ -0.01
SYNGAP1-204ENST00000449372 PRPHP41219 470 aa14.96□□□□□ -0.02
SYNGAP1-204ENST00000449372 PPFIA3O75145 1194 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 DEXIO95424 95 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 ATP1A2P50993 1020 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 CAPRIN2Q6IMN6 1127 aaKnown RBP14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 RPUSD2Q8IZ73 545 aaKnown RBP14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 RPGRIP1Q96KN7 1286 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 RMND1Q9NWS8 449 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 FGRP09769 529 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 CKAP4Q07065 602 aaKnown RBP14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 NFIXQ14938 502 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 SLC51AQ86UW1 340 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 CPLX3Q8WVH0 158 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 HOOK2Q96ED9 719 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 PAGR1Q9BTK6 254 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 SLC4A4Q9Y6R1 1079 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 RAB27AP51159 221 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 DRP2Q13474 957 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 RTN1Q16799 776 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 SLC5A9Q2M3M2 681 aa14.95□□□□□ -0.02
SYNGAP1-204ENST00000449372 THEMIS2Q5TEJ8 643 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms