RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 SHISA4Q96DD7 197 aa16.85■□□□□ 0.29
SHANK2-210ENST00000449116 GJB4Q9NTQ9 266 aa16.85■□□□□ 0.29
SHANK2-210ENST00000449116 MORF4L1Q9UBU8 362 aa16.85■□□□□ 0.29
SHANK2-210ENST00000449116 MRPL11Q9Y3B7 192 aaKnown RBP16.85■□□□□ 0.29
SHANK2-210ENST00000449116 COL11A1P12107 1806 aaPredicted RBP16.84■□□□□ 0.29
SHANK2-210ENST00000449116 ESYT2A0FGR8 921 aa16.84■□□□□ 0.29
SHANK2-210ENST00000449116 H3BQV1 296 aa16.84■□□□□ 0.29
SHANK2-210ENST00000449116 TLR2O60603 784 aa16.84■□□□□ 0.29
SHANK2-210ENST00000449116 PEX10O60683 326 aa16.84■□□□□ 0.29
SHANK2-210ENST00000449116 ALAS1P13196 640 aa16.84■□□□□ 0.29
SHANK2-210ENST00000449116 PDIA4P13667 645 aaKnown RBP16.84■□□□□ 0.29
SHANK2-210ENST00000449116 SYT1P21579 422 aa16.84■□□□□ 0.29
SHANK2-210ENST00000449116 COPB2P35606 906 aa16.84■□□□□ 0.29
SHANK2-210ENST00000449116 CRHR2Q13324 411 aa16.84■□□□□ 0.29
SHANK2-210ENST00000449116 FAM110CQ1W6H9 321 aa16.84■□□□□ 0.29
SHANK2-210ENST00000449116 KRT40Q6A162 431 aa16.84■□□□□ 0.29
SHANK2-210ENST00000449116 PHF20Q9BVI0 1012 aa16.84■□□□□ 0.29
SHANK2-210ENST00000449116 ZMYND12Q9H0C1 365 aa16.84■□□□□ 0.29
SHANK2-210ENST00000449116 SMCO2A6NFE2 343 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 SLC25A27O95847 323 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 CALML3P27482 149 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 GNA11P29992 359 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 NLRP5P59047 1200 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 CCNA1P78396 465 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 Q3C1V9 767 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 GALNT17Q6IS24 598 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 C17orf99Q6UX52 265 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 CHST13Q8NET6 341 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 TRERF1Q96PN7 1200 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 MOV10L1Q9BXT6 1211 aaKnown RBP16.83■□□□□ 0.28
SHANK2-210ENST00000449116 C6orf50Q9HD87 102 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 HOMER2Q9NSB8 354 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 RNF146Q9NTX7 359 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 CPA4Q9UI42 421 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 KCNJ14Q9UNX9 436 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 RIPK3Q9Y572 518 aa16.83■□□□□ 0.28
SHANK2-210ENST00000449116 STX6O43752 255 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 MMP1P03956 469 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 BCRP11274 1271 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 DDIT3P35638 169 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 ADCY7P51828 1080 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 GUCY1B3Q02153 619 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 NCAPG2Q86XI2 1143 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 SHCBP1Q8NEM2 672 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 CUL5Q93034 780 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 CFHR5Q9BXR6 569 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 GLT8D2Q9H1C3 349 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 ACAD9Q9H845 621 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 PSTPIP2Q9H939 334 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 BRMS1Q9HCU9 246 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 RIC8AQ9NPQ8 531 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 PCDHA4Q9UN74 947 aa16.82■□□□□ 0.28
SHANK2-210ENST00000449116 VPS37CA5D8V6 355 aaPredicted RBP16.81■□□□□ 0.28
SHANK2-210ENST00000449116 OPLAHO14841 1288 aa16.81■□□□□ 0.28
SHANK2-210ENST00000449116 ERCC3P19447 782 aa16.81■□□□□ 0.28
SHANK2-210ENST00000449116 MRPL12P52815 198 aaKnown RBP16.81■□□□□ 0.28
SHANK2-210ENST00000449116 SAFBQ15424 915 aaKnown RBP eCLIP16.81■□□□□ 0.28
SHANK2-210ENST00000449116 MCF2L2Q86YR7 1114 aa16.81■□□□□ 0.28
SHANK2-210ENST00000449116 TEX2Q8IWB9 1127 aa16.81■□□□□ 0.28
SHANK2-210ENST00000449116 DAGLBQ8NCG7 672 aa16.81■□□□□ 0.28
SHANK2-210ENST00000449116 BICD2Q8TD16 824 aa16.81■□□□□ 0.28
SHANK2-210ENST00000449116 CLEC4DQ8WXI8 215 aa16.81■□□□□ 0.28
SHANK2-210ENST00000449116 MROH8Q9H579 483 aa16.81■□□□□ 0.28
SHANK2-210ENST00000449116 RNF186Q9NXI6 227 aa16.81■□□□□ 0.28
SHANK2-210ENST00000449116 FBXO40Q9UH90 709 aa16.81■□□□□ 0.28
SHANK2-210ENST00000449116 MTMR6Q9Y217 621 aa16.81■□□□□ 0.28
SHANK2-210ENST00000449116 NFIBO00712 420 aa16.8■□□□□ 0.28
SHANK2-210ENST00000449116 KRT2P35908 639 aa16.8■□□□□ 0.28
SHANK2-210ENST00000449116 NPY5RQ15761 445 aa16.8■□□□□ 0.28
SHANK2-210ENST00000449116 MUM1L1Q5H9M0 696 aa16.8■□□□□ 0.28
SHANK2-210ENST00000449116 BLIDQ8IZY5 108 aa16.8■□□□□ 0.28
SHANK2-210ENST00000449116 MAF1Q9H063 256 aa16.8■□□□□ 0.28
SHANK2-210ENST00000449116 CIZ1Q9ULV3 898 aaPredicted RBP16.8■□□□□ 0.28
SHANK2-210ENST00000449116 GCOM1H8Y6P7 765 aaPredicted RBP16.79■□□□□ 0.28
SHANK2-210ENST00000449116 PIK3CDO00329 1044 aa16.79■□□□□ 0.28
SHANK2-210ENST00000449116 TRPA1O75762 1119 aa16.79■□□□□ 0.28
SHANK2-210ENST00000449116 CFBP00751 764 aa16.79■□□□□ 0.28
SHANK2-210ENST00000449116 POLR2MP0CAP2 368 aa16.79■□□□□ 0.28
SHANK2-210ENST00000449116 GHRHRQ02643 423 aa16.79■□□□□ 0.28
SHANK2-210ENST00000449116 MAP2K1Q02750 393 aaPredicted RBP16.79■□□□□ 0.28
SHANK2-210ENST00000449116 CCAR1Q8IX12 1150 aaKnown RBP16.79■□□□□ 0.28
SHANK2-210ENST00000449116 DIS3L2Q8IYB7 885 aaKnown RBP16.79■□□□□ 0.28
SHANK2-210ENST00000449116 SAMD3Q8N6K7 520 aa16.79■□□□□ 0.28
SHANK2-210ENST00000449116 PORCNQ9H237 461 aa16.79■□□□□ 0.28
SHANK2-210ENST00000449116 SAGE1Q9NXZ1 904 aa16.79■□□□□ 0.28
SHANK2-210ENST00000449116 MAP3K20Q9NYL2 800 aaKnown RBP16.79■□□□□ 0.28
SHANK2-210ENST00000449116 SMCHD1A6NHR9 2005 aa16.79■□□□□ 0.28
SHANK2-210ENST00000449116 BTBD18B2RXH4 712 aa16.78■□□□□ 0.28
SHANK2-210ENST00000449116 MEIS2O14770 477 aa16.78■□□□□ 0.28
SHANK2-210ENST00000449116 TBC1D8O95759 1140 aa16.78■□□□□ 0.28
SHANK2-210ENST00000449116 MAPK4P31152 587 aa16.78■□□□□ 0.28
SHANK2-210ENST00000449116 NUCB2P80303 420 aa16.78■□□□□ 0.28
SHANK2-210ENST00000449116 PKP1Q13835 747 aa16.78■□□□□ 0.28
SHANK2-210ENST00000449116 MCTP1Q6DN14 999 aa16.78■□□□□ 0.28
SHANK2-210ENST00000449116 USP17L6PQ6QN14 398 aa16.78■□□□□ 0.28
SHANK2-210ENST00000449116 NSMFQ6X4W1 530 aa16.78■□□□□ 0.28
SHANK2-210ENST00000449116 RNF207Q6ZRF8 634 aa16.78■□□□□ 0.28
SHANK2-210ENST00000449116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.78■□□□□ 0.28
SHANK2-210ENST00000449116 REXO1Q8N1G1 1221 aaKnown RBP16.78■□□□□ 0.28
SHANK2-210ENST00000449116 DNAJC5GQ8N7S2 189 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 194.5 ms