RNA–Protein interactions for RNA: ENST00000447136.1

SNX8-205, Transcript of sorting nexin 8, humanhuman

TSL 3

Gene SNX8, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-205ENST00000447136 CALM3P0DP25 149 aa13.2□□□□□ -0.3
SNX8-205ENST00000447136 GJA8P48165 433 aa13.2□□□□□ -0.3
SNX8-205ENST00000447136 EXOSC10Q01780 885 aaKnown RBP13.2□□□□□ -0.3
SNX8-205ENST00000447136 QRICH1Q2TAL8 776 aa13.2□□□□□ -0.3
SNX8-205ENST00000447136 MAP3K21Q5TCX8 1036 aa13.2□□□□□ -0.3
SNX8-205ENST00000447136 MICU3Q86XE3 530 aa13.2□□□□□ -0.3
SNX8-205ENST00000447136 FBXO11Q86XK2 927 aa13.2□□□□□ -0.3
SNX8-205ENST00000447136 TINF2Q9BSI4 451 aa13.2□□□□□ -0.3
SNX8-205ENST00000447136 PAK6Q9NQU5 681 aaPredicted RBP13.2□□□□□ -0.3
SNX8-205ENST00000447136 DIS3Q9Y2L1 958 aaKnown RBP13.2□□□□□ -0.3
SNX8-205ENST00000447136 RLFQ13129 1914 aa13.19□□□□□ -0.3
SNX8-205ENST00000447136 SZT2Q5T011 3432 aa13.19□□□□□ -0.3
SNX8-205ENST00000447136 PFASO15067 1338 aa13.19□□□□□ -0.3
SNX8-205ENST00000447136 CASTP20810 708 aaKnown RBP13.19□□□□□ -0.3
SNX8-205ENST00000447136 CALML3P27482 149 aa13.19□□□□□ -0.3
SNX8-205ENST00000447136 CNTN2Q02246 1040 aa13.19□□□□□ -0.3
SNX8-205ENST00000447136 BAATQ14032 418 aaPredicted RBP13.19□□□□□ -0.3
SNX8-205ENST00000447136 Q6ZUG5 572 aa13.19□□□□□ -0.3
SNX8-205ENST00000447136 KCNB2Q92953 911 aa13.19□□□□□ -0.3
SNX8-205ENST00000447136 PIGSQ96S52 555 aa13.19□□□□□ -0.3
SNX8-205ENST00000447136 CNPY2Q9Y2B0 182 aa13.19□□□□□ -0.3
SNX8-205ENST00000447136 MGAMO43451 1857 aa13.19□□□□□ -0.3
SNX8-205ENST00000447136 WDR19Q8NEZ3 1342 aa13.18□□□□□ -0.3
SNX8-205ENST00000447136 DNAJC25-GNG10A0A024R161 153 aa13.18□□□□□ -0.3
SNX8-205ENST00000447136 KLF18A0A0U1RQI7 1052 aa13.18□□□□□ -0.3
SNX8-205ENST00000447136 ZBTB5O15062 677 aa13.18□□□□□ -0.3
SNX8-205ENST00000447136 EPB41L2O43491 1005 aaKnown RBP13.18□□□□□ -0.3
SNX8-205ENST00000447136 EIF5BO60841 1220 aaKnown RBP13.18□□□□□ -0.3
SNX8-205ENST00000447136 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
SNX8-205ENST00000447136 GNAQP50148 359 aa13.18□□□□□ -0.3
SNX8-205ENST00000447136 ANO1Q5XXA6 986 aa13.18□□□□□ -0.3
SNX8-205ENST00000447136 RNF207Q6ZRF8 634 aa13.18□□□□□ -0.3
SNX8-205ENST00000447136 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNX8-205ENST00000447136 CMTR1Q8N1G2 835 aaKnown RBP13.18□□□□□ -0.3
SNX8-205ENST00000447136 CCDC82Q8N4S0 544 aa13.18□□□□□ -0.3
SNX8-205ENST00000447136 TRPV1Q8NER1 839 aa13.18□□□□□ -0.3
SNX8-205ENST00000447136 AMNQ9BXJ7 453 aa13.18□□□□□ -0.3
SNX8-205ENST00000447136 CYP39A1Q9NYL5 469 aa13.18□□□□□ -0.3
SNX8-205ENST00000447136 ZHX1Q9UKY1 873 aaPredicted RBP13.18□□□□□ -0.3
SNX8-205ENST00000447136 MRPL11Q9Y3B7 192 aaKnown RBP13.18□□□□□ -0.3
SNX8-205ENST00000447136 ABCB11O95342 1321 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 ZBTB43O43298 467 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 FARP2O94887 1054 aaPredicted RBP13.17□□□□□ -0.3
SNX8-205ENST00000447136 PLEKHA8P1O95397 391 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 CYBAP13498 195 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 RPS6KB1P23443 525 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 SGMS1Q86VZ5 419 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 FAM133AQ8N9E0 248 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 FANCBQ8NB91 859 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 CLEC4DQ8WXI8 215 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 BRF1Q92994 677 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 SHISA4Q96DD7 197 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 RRP36Q96EU6 259 aaKnown RBP13.17□□□□□ -0.3
SNX8-205ENST00000447136 PURBQ96QR8 312 aaKnown RBP13.17□□□□□ -0.3
SNX8-205ENST00000447136 MAP3K14Q99558 947 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 LZTS2Q9BRK4 669 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 SEC63Q9UGP8 760 aaKnown RBP13.17□□□□□ -0.3
SNX8-205ENST00000447136 DDX20Q9UHI6 824 aaKnown RBP13.17□□□□□ -0.3
SNX8-205ENST00000447136 PCDHA1Q9Y5I3 950 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 CYP46A1Q9Y6A2 500 aa13.17□□□□□ -0.3
SNX8-205ENST00000447136 TRIOBPQ9H2D6 2365 aa13.16□□□□□ -0.3
SNX8-205ENST00000447136 PNMA6FA0A0J9YX94 578 aa13.16□□□□□ -0.3
SNX8-205ENST00000447136 SOWAHBA6NEL2 793 aa13.16□□□□□ -0.3
SNX8-205ENST00000447136 ASB14A6NK59 587 aa13.16□□□□□ -0.3
SNX8-205ENST00000447136 GOLGA8AA7E2F4 631 aa13.16□□□□□ -0.3
SNX8-205ENST00000447136 GOLGA8BA8MQT2 603 aa13.16□□□□□ -0.3
SNX8-205ENST00000447136 RPS6P62753 249 aaKnown RBP13.16□□□□□ -0.3
SNX8-205ENST00000447136 APOBRQ0VD83 1088 aa13.16□□□□□ -0.3
SNX8-205ENST00000447136 APOA5Q6Q788 366 aa13.16□□□□□ -0.3
SNX8-205ENST00000447136 SLC30A10Q6XR72 485 aa13.16□□□□□ -0.3
SNX8-205ENST00000447136 ARMCX2Q7L311 632 aa13.16□□□□□ -0.3
SNX8-205ENST00000447136 ZNF467Q7Z7K2 595 aaPredicted RBP13.16□□□□□ -0.3
SNX8-205ENST00000447136 MCF2L2Q86YR7 1114 aa13.16□□□□□ -0.3
SNX8-205ENST00000447136 MSL3Q8N5Y2 521 aaKnown RBP13.16□□□□□ -0.3
SNX8-205ENST00000447136 RIOX1Q9H6W3 641 aa13.16□□□□□ -0.3
SNX8-205ENST00000447136 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.16□□□□□ -0.3
SNX8-205ENST00000447136 ADD3Q9UEY8 706 aaKnown RBP13.16□□□□□ -0.3
SNX8-205ENST00000447136 BRPF3Q9ULD4 1205 aa13.16□□□□□ -0.3
SNX8-205ENST00000447136 SYNGAP1Q96PV0 1343 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 SEPT4O43236 478 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 CYTH3O43739 400 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 MSCO60682 206 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 SNAI1O95863 264 aaPredicted RBP13.15□□□□□ -0.3
SNX8-205ENST00000447136 CFBP00751 764 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 FXR1P51114 621 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNX8-205ENST00000447136 TRAF1Q13077 416 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 ACVR2BQ13705 512 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 RTN1Q16799 776 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 SLC35G1Q2M3R5 365 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 MAMDC4Q6UXC1 1216 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 RUFY3Q7L099 469 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 EEPD1Q7L9B9 569 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 SRBD1Q8N5C6 995 aaKnown RBP13.15□□□□□ -0.3
SNX8-205ENST00000447136 TBC1D5Q92609 795 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 UPF3BQ9BZI7 483 aaKnown RBP13.15□□□□□ -0.3
SNX8-205ENST00000447136 CRISPLD2Q9H0B8 497 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 RBM28Q9NW13 759 aaKnown RBP13.15□□□□□ -0.3
SNX8-205ENST00000447136 NRBP1Q9UHY1 535 aa13.15□□□□□ -0.3
SNX8-205ENST00000447136 DDX49Q9Y6V7 483 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms