RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 hCG_1984214I3L0E3 225 aa18.39■□□□□ 0.53
TCOF1-206ENST00000445265 PRR29P0C7W0 189 aa18.39■□□□□ 0.53
TCOF1-206ENST00000445265 CYP19A1P11511 503 aaPredicted RBP18.39■□□□□ 0.53
TCOF1-206ENST00000445265 FNBP4Q8N3X1 1017 aaPredicted RBP18.39■□□□□ 0.53
TCOF1-206ENST00000445265 ZNF713Q8N859 430 aaPredicted RBP18.39■□□□□ 0.53
TCOF1-206ENST00000445265 IGDCC4Q8TDY8 1250 aa18.39■□□□□ 0.53
TCOF1-206ENST00000445265 MRPL44Q9H9J2 332 aaKnown RBP18.39■□□□□ 0.53
TCOF1-206ENST00000445265 ATP6V0A2Q9Y487 856 aa18.39■□□□□ 0.53
TCOF1-206ENST00000445265 MECOMQ03112 1051 aa18.39■□□□□ 0.53
TCOF1-206ENST00000445265 CLEC4GQ6UXB4 293 aa18.39■□□□□ 0.53
TCOF1-206ENST00000445265 GCNT3O95395 438 aa18.38■□□□□ 0.53
TCOF1-206ENST00000445265 CROCCP2Q86T23 111 aa18.38■□□□□ 0.53
TCOF1-206ENST00000445265 DDX25Q9UHL0 483 aaKnown RBP18.38■□□□□ 0.53
TCOF1-206ENST00000445265 FBXO2Q9UK22 296 aaPredicted RBP18.38■□□□□ 0.53
TCOF1-206ENST00000445265 PLS1Q14651 629 aa18.38■□□□□ 0.53
TCOF1-206ENST00000445265 CC2D1AQ6P1N0 951 aaPredicted RBP18.38■□□□□ 0.53
TCOF1-206ENST00000445265 MB21D1Q8N884 522 aa18.38■□□□□ 0.53
TCOF1-206ENST00000445265 IFT172Q9UG01 1749 aa18.38■□□□□ 0.53
TCOF1-206ENST00000445265 FRMPD2Q68DX3 1309 aaPredicted RBP18.38■□□□□ 0.53
TCOF1-206ENST00000445265 ANKRD26Q9UPS8 1709 aa18.38■□□□□ 0.53
TCOF1-206ENST00000445265 A0A1W2PRG0 241 aa18.38■□□□□ 0.53
TCOF1-206ENST00000445265 PFKFB3Q16875 520 aaPredicted RBP18.38■□□□□ 0.53
TCOF1-206ENST00000445265 ASPRV1Q53RT3 343 aa18.38■□□□□ 0.53
TCOF1-206ENST00000445265 UBL4BQ8N7F7 174 aa18.38■□□□□ 0.53
TCOF1-206ENST00000445265 SH2D4AQ9H788 454 aa18.38■□□□□ 0.53
TCOF1-206ENST00000445265 XDHP47989 1333 aa18.38■□□□□ 0.53
TCOF1-206ENST00000445265 MSL1Q68DK7 614 aa18.38■□□□□ 0.53
TCOF1-206ENST00000445265 DPF2Q92785 391 aa18.38■□□□□ 0.53
TCOF1-206ENST00000445265 ADGRG1Q9Y653 693 aa18.38■□□□□ 0.53
TCOF1-206ENST00000445265 ACTN2P35609 894 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 ARHGAP25P42331 645 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 POLR2FP61218 127 aaKnown RBP18.37■□□□□ 0.53
TCOF1-206ENST00000445265 PPP1R7Q15435 360 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 GBP6Q6ZN66 633 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 SLFN12Q8IYM2 578 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 SAMD15Q9P1V8 674 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 PPP1R1BQ9UD71 204 aaPredicted RBP18.37■□□□□ 0.53
TCOF1-206ENST00000445265 ARHGEF35A5YM69 484 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 FOXN1O15353 648 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 CHMP2AO43633 222 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 GTF2IP78347 998 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 APBA1Q02410 837 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 ABHD10Q9NUJ1 306 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 FKBP3Q00688 224 aaKnown RBP18.37■□□□□ 0.53
TCOF1-206ENST00000445265 SF3B2Q13435 895 aaKnown RBP18.37■□□□□ 0.53
TCOF1-206ENST00000445265 CUL4BQ13620 913 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 GRIPAP1Q4V328 841 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 LRRC47Q8N1G4 583 aaKnown RBP18.37■□□□□ 0.53
TCOF1-206ENST00000445265 MYCT1Q8N699 235 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 TBCKQ8TEA7 893 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 FAM204AQ9H8W3 233 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 ARHGEF10LQ9HCE6 1279 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 SWAP70Q9UH65 585 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 GDAQ9Y2T3 454 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 JRKLQ9Y4A0 524 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 SMIM23A6NLE4 172 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 BUB1O43683 1085 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 USP17L8P0C7I0 530 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 PLCG1P19174 1290 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 METTL14Q9HCE5 456 aaKnown RBP18.37■□□□□ 0.53
TCOF1-206ENST00000445265 USP40Q9NVE5 1235 aa18.37■□□□□ 0.53
TCOF1-206ENST00000445265 VIRMAQ69YN4 1812 aaKnown RBP18.37■□□□□ 0.53
TCOF1-206ENST00000445265 SPOPO43791 374 aa18.36■□□□□ 0.53
TCOF1-206ENST00000445265 STAT1P42224 750 aa18.36■□□□□ 0.53
TCOF1-206ENST00000445265 NYAP1Q6ZVC0 841 aa18.36■□□□□ 0.53
TCOF1-206ENST00000445265 DPP8Q6V1X1 898 aaPredicted RBP18.36■□□□□ 0.53
TCOF1-206ENST00000445265 ANKRD13CQ8N6S4 541 aa18.36■□□□□ 0.53
TCOF1-206ENST00000445265 LGALS16A8MUM7 142 aa18.36■□□□□ 0.53
TCOF1-206ENST00000445265 CASP1P29466 404 aa18.36■□□□□ 0.53
TCOF1-206ENST00000445265 ADAM9Q13443 819 aa18.36■□□□□ 0.53
TCOF1-206ENST00000445265 DAAM2Q86T65 1068 aa18.36■□□□□ 0.53
TCOF1-206ENST00000445265 CCDC25Q86WR0 208 aa18.36■□□□□ 0.53
TCOF1-206ENST00000445265 NHEJ1Q9H9Q4 299 aaPredicted RBP18.36■□□□□ 0.53
TCOF1-206ENST00000445265 PRM3Q9NNZ6 103 aa18.36■□□□□ 0.53
TCOF1-206ENST00000445265 FAN1Q9Y2M0 1017 aa18.36■□□□□ 0.53
TCOF1-206ENST00000445265 PARP3Q9Y6F1 533 aa18.36■□□□□ 0.53
TCOF1-206ENST00000445265 ST3GAL1Q11201 340 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 CASP8Q14790 479 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 ATP2A1O14983 1001 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 GNGT1P63211 74 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 GPATCH4Q5T3I0 446 aaKnown RBP18.35■□□□□ 0.53
TCOF1-206ENST00000445265 RBM26Q5T8P6 1007 aaKnown RBP18.35■□□□□ 0.53
TCOF1-206ENST00000445265 CAPS2Q9BXY5 557 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 IMPG2Q9BZV3 1241 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 KCNK3O14649 394 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 EXOC3O60645 756 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 TADA3O75528 432 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 BCRP11274 1271 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 GCFC2P16383 781 aaKnown RBP18.35■□□□□ 0.53
TCOF1-206ENST00000445265 PPP2R5EQ16537 467 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 PLCD4Q9BRC7 762 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 ABCB6Q9NP58 842 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 RNF14Q9UBS8 474 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 AMFRQ9UKV5 643 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 HPS5Q9UPZ3 1129 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 KIFAP3Q92845 792 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 PCDHB13Q9Y5F0 798 aa18.35■□□□□ 0.53
TCOF1-206ENST00000445265 TEX33O43247 280 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 AP5Z1O43299 807 aa18.34■□□□□ 0.53
TCOF1-206ENST00000445265 GUCY1A2P33402 732 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms