RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 TM6SF1Q9BZW5 370 aa14.22□□□□□ -0.13
LTBR-204ENST00000444814 UBA5Q9GZZ9 404 aa14.22□□□□□ -0.13
LTBR-204ENST00000444814 RLFQ13129 1914 aa14.22□□□□□ -0.13
LTBR-204ENST00000444814 ZNF236Q9UL36 1845 aa14.22□□□□□ -0.13
LTBR-204ENST00000444814 ASB14A6NK59 587 aa14.22□□□□□ -0.13
LTBR-204ENST00000444814 ZBTB5O15062 677 aa14.22□□□□□ -0.13
LTBR-204ENST00000444814 ZBTB43O43298 467 aa14.22□□□□□ -0.13
LTBR-204ENST00000444814 PRKAR2AP13861 404 aaKnown RBP14.22□□□□□ -0.13
LTBR-204ENST00000444814 CASTP20810 708 aaKnown RBP14.22□□□□□ -0.13
LTBR-204ENST00000444814 EXOSC10Q01780 885 aaKnown RBP14.22□□□□□ -0.13
LTBR-204ENST00000444814 TRIB2Q92519 343 aa14.22□□□□□ -0.13
LTBR-204ENST00000444814 VAT1LQ9HCJ6 419 aa14.22□□□□□ -0.13
LTBR-204ENST00000444814 MAD2L2Q9UI95 211 aa14.22□□□□□ -0.13
LTBR-204ENST00000444814 NAP1L2Q9ULW6 460 aaPredicted RBP14.22□□□□□ -0.13
LTBR-204ENST00000444814 ZNF536O15090 1300 aa14.21□□□□□ -0.13
LTBR-204ENST00000444814 RPS6KB1P23443 525 aa14.21□□□□□ -0.14
LTBR-204ENST00000444814 NSMFQ6X4W1 530 aa14.21□□□□□ -0.14
LTBR-204ENST00000444814 RGS22Q8NE09 1264 aa14.21□□□□□ -0.14
LTBR-204ENST00000444814 MAML3Q96JK9 1138 aa14.21□□□□□ -0.14
LTBR-204ENST00000444814 SPZ1Q9BXG8 430 aa14.21□□□□□ -0.14
LTBR-204ENST00000444814 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.21□□□□□ -0.14
LTBR-204ENST00000444814 MAP3K20Q9NYL2 800 aaKnown RBP14.21□□□□□ -0.14
LTBR-204ENST00000444814 RIPK3Q9Y572 518 aa14.21□□□□□ -0.14
LTBR-204ENST00000444814 PARP14Q460N5 1801 aa14.21□□□□□ -0.14
LTBR-204ENST00000444814 SYNGAP1Q96PV0 1343 aa14.2□□□□□ -0.14
LTBR-204ENST00000444814 PTPDC1A2A3K4 754 aa14.2□□□□□ -0.14
LTBR-204ENST00000444814 MYCP01106 439 aaPredicted RBP14.2□□□□□ -0.14
LTBR-204ENST00000444814 SOX10P56693 466 aa14.2□□□□□ -0.14
LTBR-204ENST00000444814 ANKRD1Q15327 319 aa14.2□□□□□ -0.14
LTBR-204ENST00000444814 ZNF792Q3KQV3 632 aa14.2□□□□□ -0.14
LTBR-204ENST00000444814 ADCK5Q3MIX3 580 aa14.2□□□□□ -0.14
LTBR-204ENST00000444814 RUFY3Q7L099 469 aa14.2□□□□□ -0.14
LTBR-204ENST00000444814 RASGRP2Q7LDG7 609 aa14.2□□□□□ -0.14
LTBR-204ENST00000444814 MICU3Q86XE3 530 aa14.2□□□□□ -0.14
LTBR-204ENST00000444814 FBXL16Q8N461 479 aa14.2□□□□□ -0.14
LTBR-204ENST00000444814 FANCBQ8NB91 859 aa14.2□□□□□ -0.14
LTBR-204ENST00000444814 NPLOC4Q8TAT6 608 aa14.2□□□□□ -0.14
LTBR-204ENST00000444814 RIOX1Q9H6W3 641 aa14.2□□□□□ -0.14
LTBR-204ENST00000444814 JMJD4Q9H9V9 463 aa14.2□□□□□ -0.14
LTBR-204ENST00000444814 RBM27Q9P2N5 1060 aaKnown RBP14.2□□□□□ -0.14
LTBR-204ENST00000444814 PNMA6FA0A0J9YX94 578 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 KLF18A0A0U1RQI7 1052 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 COBLO75128 1261 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 CNGA1P29973 690 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 GJA8P48165 433 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 SNAP25P60880 206 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 RTN1Q16799 776 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 QRICH1Q2TAL8 776 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 USH1GQ495M9 461 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 MAP3K21Q5TCX8 1036 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 APOA5Q6Q788 366 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 RNF207Q6ZRF8 634 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 Q6ZUG5 572 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 DHX37Q8IY37 1157 aaKnown RBP14.19□□□□□ -0.14
LTBR-204ENST00000444814 IL27Q8NEV9 243 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 TINF2Q9BSI4 451 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 LRRC2Q9BYS8 371 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 A1CFQ9NQ94 594 aaKnown RBP14.19□□□□□ -0.14
LTBR-204ENST00000444814 ZSWIM8A7E2V4 1837 aa14.19□□□□□ -0.14
LTBR-204ENST00000444814 PCNTO95613 3336 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 DNAJC25-GNG10A0A024R161 153 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 GOLGA8AA7E2F4 631 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 GOLGA8BA8MQT2 603 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 TFRCP02786 760 aaKnown RBP14.18□□□□□ -0.14
LTBR-204ENST00000444814 PGK2P07205 417 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 CACNB2Q08289 660 aaPredicted RBP14.18□□□□□ -0.14
LTBR-204ENST00000444814 CCL14Q16627 93 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 CPLX2Q6PUV4 134 aaKnown RBP14.18□□□□□ -0.14
LTBR-204ENST00000444814 HOMER1Q86YM7 354 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 TEX2Q8IWB9 1127 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 STAG2Q8N3U4 1231 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 ANKLE1Q8NAG6 615 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 UNC93B1Q9H1C4 597 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 ZSWIM6Q9HCJ5 1215 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 PAK6Q9NQU5 681 aaPredicted RBP14.18□□□□□ -0.14
LTBR-204ENST00000444814 CYP39A1Q9NYL5 469 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 PCDHA1Q9Y5I3 950 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 PLXNB2O15031 1838 aa14.18□□□□□ -0.14
LTBR-204ENST00000444814 SGPL1O95470 568 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 METAP2P50579 478 aaKnown RBP eCLIP14.17□□□□□ -0.14
LTBR-204ENST00000444814 AKAP17AQ02040 695 aaKnown RBP14.17□□□□□ -0.14
LTBR-204ENST00000444814 MTFR1Q15390 333 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 MAMDC4Q6UXC1 1216 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 DNERQ8NFT8 737 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 U2AF1L4Q8WU68 220 aaKnown RBP14.17□□□□□ -0.14
LTBR-204ENST00000444814 CUL5Q93034 780 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 MTMR8Q96EF0 704 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 DEFB118Q96PH6 123 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 ABHD16BQ9H3Z7 469 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 PDRG1Q9NUG6 133 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 COL11A1P12107 1806 aaPredicted RBP14.17□□□□□ -0.14
LTBR-204ENST00000444814 hCG_1984214I3L0E3 225 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 CYP2C19P33261 490 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 FXR2P51116 673 aaKnown RBP eCLIP14.17□□□□□ -0.14
LTBR-204ENST00000444814 ZNF713Q8N859 430 aaPredicted RBP14.17□□□□□ -0.14
LTBR-204ENST00000444814 FAM133AQ8N9E0 248 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 BRF1Q92994 677 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 MYL10Q9BUA6 226 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 SENP2Q9HC62 589 aa14.17□□□□□ -0.14
LTBR-204ENST00000444814 SEPT4O43236 478 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms