RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 CLEC1BQ9P126 229 aa9.16□□□□□ -0.94
SSXP3-201ENST00000442971 ARHGAP6O43182 974 aa9.15□□□□□ -0.94
SSXP3-201ENST00000442971 IQCF3P0C7M6 154 aa9.15□□□□□ -0.94
SSXP3-201ENST00000442971 NPR3P17342 541 aa9.15□□□□□ -0.94
SSXP3-201ENST00000442971 C19orf57Q0VDD7 668 aa9.15□□□□□ -0.94
SSXP3-201ENST00000442971 USP17L2Q6R6M4 530 aa9.15□□□□□ -0.94
SSXP3-201ENST00000442971 CXCL17Q6UXB2 119 aa9.15□□□□□ -0.94
SSXP3-201ENST00000442971 FBXO33Q7Z6M2 555 aa9.15□□□□□ -0.94
SSXP3-201ENST00000442971 SPATA18Q8TC71 538 aa9.15□□□□□ -0.94
SSXP3-201ENST00000442971 METTL22Q9BUU2 404 aaPredicted RBP9.15□□□□□ -0.94
SSXP3-201ENST00000442971 TMEM121BQ9BXQ6 578 aaPredicted RBP9.15□□□□□ -0.94
SSXP3-201ENST00000442971 SIL1Q9H173 461 aa9.15□□□□□ -0.94
SSXP3-201ENST00000442971 PCDHB8Q9UN66 801 aa9.15□□□□□ -0.94
SSXP3-201ENST00000442971 TIMELESSQ9UNS1 1208 aa9.15□□□□□ -0.94
SSXP3-201ENST00000442971 INSL6Q9Y581 213 aa9.15□□□□□ -0.94
SSXP3-201ENST00000442971 LAMA5O15230 3695 aa9.15□□□□□ -0.94
SSXP3-201ENST00000442971 CLSPNQ9HAW4 1339 aa9.15□□□□□ -0.94
SSXP3-201ENST00000442971 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.14□□□□□ -0.95
SSXP3-201ENST00000442971 CABYRO75952 493 aa9.14□□□□□ -0.95
SSXP3-201ENST00000442971 SUPT20HL2P0C7V6 817 aa9.14□□□□□ -0.95
SSXP3-201ENST00000442971 KRT24Q2M2I5 525 aa9.14□□□□□ -0.95
SSXP3-201ENST00000442971 CATSPERGQ6ZRH7 1159 aa9.14□□□□□ -0.95
SSXP3-201ENST00000442971 ZCCHC14Q8WYQ9 949 aaKnown RBP9.14□□□□□ -0.95
SSXP3-201ENST00000442971 PARD6AQ9NPB6 346 aa9.14□□□□□ -0.95
SSXP3-201ENST00000442971 DDX4Q9NQI0 724 aaKnown RBP9.14□□□□□ -0.95
SSXP3-201ENST00000442971 TANC1Q9C0D5 1861 aa9.13□□□□□ -0.95
SSXP3-201ENST00000442971 SPDYE16A6NNV3 312 aaPredicted RBP9.13□□□□□ -0.95
SSXP3-201ENST00000442971 CTAGE5O15320 804 aa9.13□□□□□ -0.95
SSXP3-201ENST00000442971 ASNSP08243 561 aa9.13□□□□□ -0.95
SSXP3-201ENST00000442971 FCER1AP12319 257 aa9.13□□□□□ -0.95
SSXP3-201ENST00000442971 PICALMQ13492 652 aa9.13□□□□□ -0.95
SSXP3-201ENST00000442971 UBE3BQ7Z3V4 1068 aa9.13□□□□□ -0.95
SSXP3-201ENST00000442971 TMEM192Q8IY95 271 aa9.13□□□□□ -0.95
SSXP3-201ENST00000442971 LSM14BQ9BX40 385 aaKnown RBP9.13□□□□□ -0.95
SSXP3-201ENST00000442971 PLA2G12BQ9BX93 195 aa9.13□□□□□ -0.95
SSXP3-201ENST00000442971 SPATC1LQ9H0A9 340 aa9.13□□□□□ -0.95
SSXP3-201ENST00000442971 ALDH8A1Q9H2A2 487 aaPredicted RBP9.13□□□□□ -0.95
SSXP3-201ENST00000442971 MROH8Q9H579 483 aa9.13□□□□□ -0.95
SSXP3-201ENST00000442971 NUDCQ9Y266 331 aa9.13□□□□□ -0.95
SSXP3-201ENST00000442971 ADCY6O43306 1168 aa9.12□□□□□ -0.95
SSXP3-201ENST00000442971 PLA2G2AP14555 144 aa9.12□□□□□ -0.95
SSXP3-201ENST00000442971 BEX3Q00994 111 aa9.12□□□□□ -0.95
SSXP3-201ENST00000442971 RETREG2Q8NC44 543 aa9.12□□□□□ -0.95
SSXP3-201ENST00000442971 SUSD6Q92537 303 aa9.12□□□□□ -0.95
SSXP3-201ENST00000442971 PHAXQ9H814 394 aaKnown RBP9.12□□□□□ -0.95
SSXP3-201ENST00000442971 SCUBE2Q9NQ36 999 aa9.12□□□□□ -0.95
SSXP3-201ENST00000442971 TRMT13Q9NUP7 481 aaKnown RBP9.12□□□□□ -0.95
SSXP3-201ENST00000442971 BABAM1Q9NWV8 329 aa9.12□□□□□ -0.95
SSXP3-201ENST00000442971 ZHX1Q9UKY1 873 aaPredicted RBP9.12□□□□□ -0.95
SSXP3-201ENST00000442971 DIS3Q9Y2L1 958 aaKnown RBP9.12□□□□□ -0.95
SSXP3-201ENST00000442971 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.12□□□□□ -0.95
SSXP3-201ENST00000442971 NLRC5Q86WI3 1866 aa9.12□□□□□ -0.95
SSXP3-201ENST00000442971 AKAP13Q12802 2813 aa9.12□□□□□ -0.95
SSXP3-201ENST00000442971 SPTAN1Q13813 2472 aaKnown RBP9.12□□□□□ -0.95
SSXP3-201ENST00000442971 H7C1W4 665 aa9.11□□□□□ -0.95
SSXP3-201ENST00000442971 IGKV5-2P06315 115 aa9.11□□□□□ -0.95
SSXP3-201ENST00000442971 PGK2P07205 417 aa9.11□□□□□ -0.95
SSXP3-201ENST00000442971 SP100P23497 879 aaPredicted RBP9.11□□□□□ -0.95
SSXP3-201ENST00000442971 JAG1P78504 1218 aa9.11□□□□□ -0.95
SSXP3-201ENST00000442971 IFIT5Q13325 482 aaKnown RBP9.11□□□□□ -0.95
SSXP3-201ENST00000442971 PDAP1Q13442 181 aaKnown RBP9.11□□□□□ -0.95
SSXP3-201ENST00000442971 LDHAL6AQ6ZMR3 332 aa9.11□□□□□ -0.95
SSXP3-201ENST00000442971 NCAPG2Q86XI2 1143 aa9.11□□□□□ -0.95
SSXP3-201ENST00000442971 FBXO11Q86XK2 927 aa9.11□□□□□ -0.95
SSXP3-201ENST00000442971 BORCS6Q96GS4 357 aa9.11□□□□□ -0.95
SSXP3-201ENST00000442971 C12orf42Q96LP6 360 aa9.11□□□□□ -0.95
SSXP3-201ENST00000442971 LMAN2LQ9H0V9 348 aa9.11□□□□□ -0.95
SSXP3-201ENST00000442971 ITPR3Q14573 2671 aa9.11□□□□□ -0.95
SSXP3-201ENST00000442971 SPTLC1O15269 473 aa9.1□□□□□ -0.95
SSXP3-201ENST00000442971 PSMC6P62333 389 aa9.1□□□□□ -0.95
SSXP3-201ENST00000442971 NKX3-2P78367 333 aa9.1□□□□□ -0.95
SSXP3-201ENST00000442971 SRSF1Q07955 248 aaKnown RBP eCLIP9.1□□□□□ -0.95
SSXP3-201ENST00000442971 ZNF792Q3KQV3 632 aa9.1□□□□□ -0.95
SSXP3-201ENST00000442971 CAVIN4Q5BKX8 364 aa9.1□□□□□ -0.95
SSXP3-201ENST00000442971 C19orf48Q6RUI8 117 aa9.1□□□□□ -0.95
SSXP3-201ENST00000442971 EFHBQ8N7U6 833 aa9.1□□□□□ -0.95
SSXP3-201ENST00000442971 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.1□□□□□ -0.95
SSXP3-201ENST00000442971 CNNM1Q9NRU3 951 aa9.1□□□□□ -0.95
SSXP3-201ENST00000442971 BARX2Q9UMQ3 279 aaPredicted RBP9.1□□□□□ -0.95
SSXP3-201ENST00000442971 CACNA1IQ9P0X4 2223 aa9.1□□□□□ -0.95
SSXP3-201ENST00000442971 CFAP46Q8IYW2 2715 aa9.09□□□□□ -0.95
SSXP3-201ENST00000442971 ABHD14A-ACY1A0A1B0GW23 586 aa9.09□□□□□ -0.95
SSXP3-201ENST00000442971 GRM6O15303 877 aa9.09□□□□□ -0.95
SSXP3-201ENST00000442971 SNAI1O95863 264 aaPredicted RBP9.09□□□□□ -0.95
SSXP3-201ENST00000442971 NTRK1P04629 796 aa9.09□□□□□ -0.95
SSXP3-201ENST00000442971 PLCG2P16885 1265 aa9.09□□□□□ -0.95
SSXP3-201ENST00000442971 SMPD1P17405 629 aa9.09□□□□□ -0.95
SSXP3-201ENST00000442971 ZEB1P37275 1124 aaPredicted RBP9.09□□□□□ -0.95
SSXP3-201ENST00000442971 PSEN1P49768 467 aa9.09□□□□□ -0.95
SSXP3-201ENST00000442971 HTRA4P83105 476 aaPredicted RBP9.09□□□□□ -0.95
SSXP3-201ENST00000442971 GCKRQ14397 625 aa9.09□□□□□ -0.95
SSXP3-201ENST00000442971 ZYXQ15942 572 aaKnown RBP9.09□□□□□ -0.95
SSXP3-201ENST00000442971 CNKSR3Q6P9H4 555 aa9.09□□□□□ -0.95
SSXP3-201ENST00000442971 GATA6Q92908 595 aa9.09□□□□□ -0.95
SSXP3-201ENST00000442971 ADAM33Q9BZ11 813 aa9.09□□□□□ -0.95
SSXP3-201ENST00000442971 SRPK3Q9UPE1 567 aa9.09□□□□□ -0.95
SSXP3-201ENST00000442971 SMG5Q9UPR3 1016 aaKnown RBP9.09□□□□□ -0.95
SSXP3-201ENST00000442971 RAI2Q9Y5P3 530 aa9.09□□□□□ -0.95
SSXP3-201ENST00000442971 KALRNO60229 2985 aa9.09□□□□□ -0.95
SSXP3-201ENST00000442971 NEFMP07197 916 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms