RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 MB21D1Q8N884 522 aa24.21■■□□□ 1.47
VPS13B-204ENST00000441350 TNFRSF25Q93038 417 aa24.21■■□□□ 1.47
VPS13B-204ENST00000441350 CCPG1Q9ULG6 757 aa24.21■■□□□ 1.47
VPS13B-204ENST00000441350 CTDP1Q9Y5B0 961 aaPredicted RBP24.21■■□□□ 1.47
VPS13B-204ENST00000441350 ABCB11O95342 1321 aa24.21■■□□□ 1.47
VPS13B-204ENST00000441350 PDHXO00330 501 aa24.21■■□□□ 1.47
VPS13B-204ENST00000441350 ADCY7P51828 1080 aa24.21■■□□□ 1.47
VPS13B-204ENST00000441350 FAM43AQ8N2R8 423 aa24.21■■□□□ 1.47
VPS13B-204ENST00000441350 PNMA3Q9UL41 463 aa24.21■■□□□ 1.47
VPS13B-204ENST00000441350 OPLAHO14841 1288 aa24.2■■□□□ 1.46
VPS13B-204ENST00000441350 NOSTRINQ8IVI9 506 aa24.2■■□□□ 1.46
VPS13B-204ENST00000441350 BICD2Q8TD16 824 aa24.2■■□□□ 1.46
VPS13B-204ENST00000441350 GLT8D2Q9H1C3 349 aa24.2■■□□□ 1.46
VPS13B-204ENST00000441350 PSTPIP2Q9H939 334 aa24.2■■□□□ 1.46
VPS13B-204ENST00000441350 MRPL11Q9Y3B7 192 aaKnown RBP24.2■■□□□ 1.46
VPS13B-204ENST00000441350 ATP6V1DQ9Y5K8 247 aa24.2■■□□□ 1.46
VPS13B-204ENST00000441350 MRPL12P52815 198 aaKnown RBP24.19■■□□□ 1.46
VPS13B-204ENST00000441350 GNL2Q13823 731 aaKnown RBP24.19■■□□□ 1.46
VPS13B-204ENST00000441350 CLEC17AQ6ZS10 378 aa24.19■■□□□ 1.46
VPS13B-204ENST00000441350 CUL5Q93034 780 aa24.19■■□□□ 1.46
VPS13B-204ENST00000441350 RASSF10A6NK89 507 aa24.18■■□□□ 1.46
VPS13B-204ENST00000441350 INHBEP58166 350 aa24.18■■□□□ 1.46
VPS13B-204ENST00000441350 FAM173BQ6P4H8 233 aa24.18■■□□□ 1.46
VPS13B-204ENST00000441350 TEX2Q8IWB9 1127 aa24.18■■□□□ 1.46
VPS13B-204ENST00000441350 TEX13BQ9BXU2 312 aa24.18■■□□□ 1.46
VPS13B-204ENST00000441350 BTBD7Q9P203 1132 aa24.18■■□□□ 1.46
VPS13B-204ENST00000441350 PCDHA6Q9UN73 950 aa24.18■■□□□ 1.46
VPS13B-204ENST00000441350 PCDHA8Q9Y5H6 950 aa24.18■■□□□ 1.46
VPS13B-204ENST00000441350 MYH15Q9Y2K3 1946 aa24.18■■□□□ 1.46
VPS13B-204ENST00000441350 CLEC4DQ8WXI8 215 aa24.17■■□□□ 1.46
VPS13B-204ENST00000441350 ZCCHC17Q9NP64 241 aaKnown RBP24.17■■□□□ 1.46
VPS13B-204ENST00000441350 CNMDO75829 334 aa24.17■■□□□ 1.46
VPS13B-204ENST00000441350 CYP2C8P10632 490 aa24.17■■□□□ 1.46
VPS13B-204ENST00000441350 CLK2P49760 499 aaKnown RBP24.17■■□□□ 1.46
VPS13B-204ENST00000441350 SNRNP48Q6IEG0 339 aaKnown RBP24.17■■□□□ 1.46
VPS13B-204ENST00000441350 REXO1Q8N1G1 1221 aaKnown RBP24.17■■□□□ 1.46
VPS13B-204ENST00000441350 RASGRP4Q8TDF6 673 aa24.17■■□□□ 1.46
VPS13B-204ENST00000441350 RBPJLQ9UBG7 517 aa24.17■■□□□ 1.46
VPS13B-204ENST00000441350 RIPK3Q9Y572 518 aa24.17■■□□□ 1.46
VPS13B-204ENST00000441350 MEIS2O14770 477 aa24.16■■□□□ 1.46
VPS13B-204ENST00000441350 ALAS1P13196 640 aa24.16■■□□□ 1.46
VPS13B-204ENST00000441350 STAT3P40763 770 aa24.16■■□□□ 1.46
VPS13B-204ENST00000441350 DEFB115Q30KQ5 88 aa24.16■■□□□ 1.46
VPS13B-204ENST00000441350 FOXD4L6Q3SYB3 417 aaPredicted RBP24.16■■□□□ 1.46
VPS13B-204ENST00000441350 NOM1Q5C9Z4 860 aaKnown RBP24.16■■□□□ 1.46
VPS13B-204ENST00000441350 EARS2Q5JPH6 523 aaKnown RBP24.16■■□□□ 1.46
VPS13B-204ENST00000441350 CYP4F22Q6NT55 531 aa24.16■■□□□ 1.46
VPS13B-204ENST00000441350 FOXD4L3Q6VB84 417 aaPredicted RBP24.16■■□□□ 1.46
VPS13B-204ENST00000441350 GTF3C2Q8WUA4 911 aaPredicted RBP24.16■■□□□ 1.46
VPS13B-204ENST00000441350 CHAMP1Q96JM3 812 aa24.16■■□□□ 1.46
VPS13B-204ENST00000441350 RABGAP1Q9Y3P9 1069 aa24.16■■□□□ 1.46
VPS13B-204ENST00000441350 PIK3CDO00329 1044 aa24.15■■□□□ 1.46
VPS13B-204ENST00000441350 IGF2BP3O00425 579 aaKnown RBP eCLIP24.15■■□□□ 1.46
VPS13B-204ENST00000441350 MYSM1Q5VVJ2 828 aa24.15■■□□□ 1.46
VPS13B-204ENST00000441350 BIN2Q9UBW5 565 aaPredicted RBP24.15■■□□□ 1.46
VPS13B-204ENST00000441350 FAM205CA6NFA0 338 aa24.14■■□□□ 1.46
VPS13B-204ENST00000441350 PEX10O60683 326 aa24.14■■□□□ 1.46
VPS13B-204ENST00000441350 BAG4O95429 457 aaKnown RBP24.14■■□□□ 1.46
VPS13B-204ENST00000441350 GHRHRQ02643 423 aa24.14■■□□□ 1.46
VPS13B-204ENST00000441350 UBE2SQ16763 222 aa24.14■■□□□ 1.46
VPS13B-204ENST00000441350 TKFCQ3LXA3 575 aa24.14■■□□□ 1.46
VPS13B-204ENST00000441350 USP17L6PQ6QN14 398 aa24.14■■□□□ 1.46
VPS13B-204ENST00000441350 TRERF1Q96PN7 1200 aa24.14■■□□□ 1.46
VPS13B-204ENST00000441350 TXNRD2Q9NNW7 524 aa24.14■■□□□ 1.46
VPS13B-204ENST00000441350 TM4SF4P48230 202 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 DNM1Q05193 864 aaKnown RBP24.13■■□□□ 1.45
VPS13B-204ENST00000441350 SREBF2Q12772 1141 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 PLS1Q14651 629 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 MUM1L1Q5H9M0 696 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 PAXIP1Q6ZW49 1069 aaPredicted RBP24.13■■□□□ 1.45
VPS13B-204ENST00000441350 KRT25Q7Z3Z0 450 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 IFNL1Q8IU54 200 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 RIOX2Q8IUF8 465 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 TBC1D5Q92609 795 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 ZIC5Q96T25 663 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 PARK7Q99497 189 aaKnown RBP24.13■■□□□ 1.45
VPS13B-204ENST00000441350 SPATC1LQ9H0A9 340 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 RNF146Q9NTX7 359 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 TMEM260Q9NX78 707 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 TCHHQ07283 1943 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 NFIBO00712 420 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 JAKMIP3Q5VZ66 844 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 PIK3AP1Q6ZUJ8 805 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 SMCR8Q8TEV9 937 aaPredicted RBP24.13■■□□□ 1.45
VPS13B-204ENST00000441350 CAPNS2Q96L46 248 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 PAGR1Q9BTK6 254 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 HOMER2Q9NSB8 354 aa24.13■■□□□ 1.45
VPS13B-204ENST00000441350 CCDC194A0A1B0GVG4 234 aa24.12■■□□□ 1.45
VPS13B-204ENST00000441350 GCLCP48506 637 aaPredicted RBP24.12■■□□□ 1.45
VPS13B-204ENST00000441350 TOB1P50616 345 aaPredicted RBP24.12■■□□□ 1.45
VPS13B-204ENST00000441350 NOGQ13253 232 aa24.12■■□□□ 1.45
VPS13B-204ENST00000441350 ATL3Q6DD88 541 aa24.12■■□□□ 1.45
VPS13B-204ENST00000441350 MCF2L2Q86YR7 1114 aa24.12■■□□□ 1.45
VPS13B-204ENST00000441350 RBBP6Q7Z6E9 1792 aaKnown RBP24.12■■□□□ 1.45
VPS13B-204ENST00000441350 GCOM1H8Y6P7 765 aaPredicted RBP24.11■■□□□ 1.45
VPS13B-204ENST00000441350 POLR2MP0CAP2 368 aa24.11■■□□□ 1.45
VPS13B-204ENST00000441350 HSD17B4P51659 736 aa24.11■■□□□ 1.45
VPS13B-204ENST00000441350 MCTP2Q6DN12 878 aa24.11■■□□□ 1.45
VPS13B-204ENST00000441350 SAMD3Q8N6K7 520 aa24.11■■□□□ 1.45
VPS13B-204ENST00000441350 ZNF396Q96N95 335 aaPredicted RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms