RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 CDK7P50613 346 aa21.48■■□□□ 1.03
GTF3A-204ENST00000438571 FPGSQ05932 587 aa21.48■■□□□ 1.03
GTF3A-204ENST00000438571 ALX1Q15699 326 aa21.48■■□□□ 1.03
GTF3A-204ENST00000438571 GLT1D1Q96MS3 346 aa21.48■■□□□ 1.03
GTF3A-204ENST00000438571 TOX2Q96NM4 488 aa21.48■■□□□ 1.03
GTF3A-204ENST00000438571 PDGFCQ9NRA1 345 aa21.48■■□□□ 1.03
GTF3A-204ENST00000438571 CYP39A1Q9NYL5 469 aa21.48■■□□□ 1.03
GTF3A-204ENST00000438571 A0A0C4DFX4 3053 aa21.48■■□□□ 1.03
GTF3A-204ENST00000438571 DCDC2CA8MYV0 355 aa21.47■■□□□ 1.03
GTF3A-204ENST00000438571 HSPD1P10809 573 aaKnown RBP21.47■■□□□ 1.03
GTF3A-204ENST00000438571 MCMDC2Q4G0Z9 681 aa21.47■■□□□ 1.03
GTF3A-204ENST00000438571 GNASQ5JWF2 1037 aa21.47■■□□□ 1.03
GTF3A-204ENST00000438571 EEPD1Q7L9B9 569 aa21.47■■□□□ 1.03
GTF3A-204ENST00000438571 FBXO16Q8IX29 292 aaPredicted RBP21.47■■□□□ 1.03
GTF3A-204ENST00000438571 CDX2Q99626 313 aaPredicted RBP21.47■■□□□ 1.03
GTF3A-204ENST00000438571 TMEM47Q9BQJ4 181 aa21.47■■□□□ 1.03
GTF3A-204ENST00000438571 SEMA6BQ9H3T3 888 aa21.47■■□□□ 1.03
GTF3A-204ENST00000438571 CCPG1Q9ULG6 757 aa21.47■■□□□ 1.03
GTF3A-204ENST00000438571 GNEQ9Y223 722 aaKnown RBP21.47■■□□□ 1.03
GTF3A-204ENST00000438571 KIAA1217Q5T5P2 1943 aa21.47■■□□□ 1.03
GTF3A-204ENST00000438571 PRUNE2Q8WUY3 3088 aa21.47■■□□□ 1.03
GTF3A-204ENST00000438571 SMAD3P84022 425 aaKnown RBP21.46■■□□□ 1.03
GTF3A-204ENST00000438571 TNFAIP2Q03169 654 aa21.46■■□□□ 1.03
GTF3A-204ENST00000438571 TKFCQ3LXA3 575 aa21.46■■□□□ 1.03
GTF3A-204ENST00000438571 NSMFQ6X4W1 530 aa21.46■■□□□ 1.03
GTF3A-204ENST00000438571 TLK2Q86UE8 772 aa21.46■■□□□ 1.03
GTF3A-204ENST00000438571 TBC1D10CQ8IV04 446 aa21.46■■□□□ 1.03
GTF3A-204ENST00000438571 FAM126BQ8IXS8 530 aa21.46■■□□□ 1.03
GTF3A-204ENST00000438571 PCSK9Q8NBP7 692 aaKnown RBP21.46■■□□□ 1.03
GTF3A-204ENST00000438571 DCAF4Q8WV16 495 aa21.46■■□□□ 1.03
GTF3A-204ENST00000438571 RANBP17Q9H2T7 1088 aaKnown RBP21.46■■□□□ 1.03
GTF3A-204ENST00000438571 ELP1O95163 1332 aa21.46■■□□□ 1.03
GTF3A-204ENST00000438571 SMPD1P17405 629 aa21.45■■□□□ 1.02
GTF3A-204ENST00000438571 PPP4R3BQ5MIZ7 849 aa21.45■■□□□ 1.02
GTF3A-204ENST00000438571 B4GALNT3Q6L9W6 998 aa21.45■■□□□ 1.02
GTF3A-204ENST00000438571 MYLIPQ8WY64 445 aa21.45■■□□□ 1.02
GTF3A-204ENST00000438571 VTI1AQ96AJ9 217 aa21.45■■□□□ 1.02
GTF3A-204ENST00000438571 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.45■■□□□ 1.02
GTF3A-204ENST00000438571 PPP1R12CQ9BZL4 782 aa21.45■■□□□ 1.02
GTF3A-204ENST00000438571 SPC25Q9HBM1 224 aa21.45■■□□□ 1.02
GTF3A-204ENST00000438571 GPCPD1Q9NPB8 672 aa21.45■■□□□ 1.02
GTF3A-204ENST00000438571 CCDC171Q6TFL3 1326 aa21.45■■□□□ 1.02
GTF3A-204ENST00000438571 A0A0U1RQG5 324 aaPredicted RBP21.44■■□□□ 1.02
GTF3A-204ENST00000438571 TRIM6-TRIM34B2RNG4 842 aa21.44■■□□□ 1.02
GTF3A-204ENST00000438571 ARVCFO00192 962 aa21.44■■□□□ 1.02
GTF3A-204ENST00000438571 NFIBO00712 420 aa21.44■■□□□ 1.02
GTF3A-204ENST00000438571 TIMP1P01033 207 aa21.44■■□□□ 1.02
GTF3A-204ENST00000438571 ICAM1P05362 532 aa21.44■■□□□ 1.02
GTF3A-204ENST00000438571 NKX3-2P78367 333 aa21.44■■□□□ 1.02
GTF3A-204ENST00000438571 SYDE2Q5VT97 1194 aa21.44■■□□□ 1.02
GTF3A-204ENST00000438571 TAPT1Q6NXT6 567 aa21.44■■□□□ 1.02
GTF3A-204ENST00000438571 CXCL17Q6UXB2 119 aa21.44■■□□□ 1.02
GTF3A-204ENST00000438571 NOL8Q76FK4 1167 aaKnown RBP21.44■■□□□ 1.02
GTF3A-204ENST00000438571 RILPL2Q969X0 211 aa21.44■■□□□ 1.02
GTF3A-204ENST00000438571 SCN10AQ9Y5Y9 1956 aa21.44■■□□□ 1.02
GTF3A-204ENST00000438571 ZMYM6O95789 1325 aa21.44■■□□□ 1.02
GTF3A-204ENST00000438571 NEDD4P46934 1319 aa21.44■■□□□ 1.02
GTF3A-204ENST00000438571 TANC1Q9C0D5 1861 aa21.43■■□□□ 1.02
GTF3A-204ENST00000438571 CUL9Q8IWT3 2517 aa21.43■■□□□ 1.02
GTF3A-204ENST00000438571 ASB14A6NK59 587 aa21.43■■□□□ 1.02
GTF3A-204ENST00000438571 TOP1P11387 765 aaKnown RBP21.43■■□□□ 1.02
GTF3A-204ENST00000438571 BTNL9Q6UXG8 535 aa21.43■■□□□ 1.02
GTF3A-204ENST00000438571 SLC30A10Q6XR72 485 aa21.43■■□□□ 1.02
GTF3A-204ENST00000438571 C16orf59Q7L2K0 433 aa21.43■■□□□ 1.02
GTF3A-204ENST00000438571 YTHDC1Q96MU7 727 aaKnown RBP21.43■■□□□ 1.02
GTF3A-204ENST00000438571 MROH7Q68CQ1 1323 aa21.43■■□□□ 1.02
GTF3A-204ENST00000438571 MYH7BA7E2Y1 1941 aa21.43■■□□□ 1.02
GTF3A-204ENST00000438571 TRIP12Q14669 1992 aaPredicted RBP21.43■■□□□ 1.02
GTF3A-204ENST00000438571 GRIN2DO15399 1336 aa21.42■■□□□ 1.02
GTF3A-204ENST00000438571 PDHBP11177 359 aa21.42■■□□□ 1.02
GTF3A-204ENST00000438571 UMODL1Q5DID0 1318 aa21.42■■□□□ 1.02
GTF3A-204ENST00000438571 MFSD5Q6N075 450 aa21.42■■□□□ 1.02
GTF3A-204ENST00000438571 SMC5Q8IY18 1101 aa21.42■■□□□ 1.02
GTF3A-204ENST00000438571 DYNC1LI2O43237 492 aaPredicted RBP21.41■■□□□ 1.02
GTF3A-204ENST00000438571 CD4P01730 458 aa21.41■■□□□ 1.02
GTF3A-204ENST00000438571 IGHDP01880 384 aa21.41■■□□□ 1.02
GTF3A-204ENST00000438571 CSF2RAP15509 400 aa21.41■■□□□ 1.02
GTF3A-204ENST00000438571 BAATQ14032 418 aaPredicted RBP21.41■■□□□ 1.02
GTF3A-204ENST00000438571 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.41■■□□□ 1.02
GTF3A-204ENST00000438571 ZKSCAN3Q9BRR0 538 aa21.41■■□□□ 1.02
GTF3A-204ENST00000438571 TCP11L1Q9NUJ3 509 aa21.41■■□□□ 1.02
GTF3A-204ENST00000438571 VCANP13611 3396 aa21.4■■□□□ 1.02
GTF3A-204ENST00000438571 ACRP10323 421 aa21.4■■□□□ 1.02
GTF3A-204ENST00000438571 ALDH5A1P51649 535 aaPredicted RBP21.4■■□□□ 1.02
GTF3A-204ENST00000438571 PSMC6P62333 389 aa21.4■■□□□ 1.02
GTF3A-204ENST00000438571 FSCN1Q16658 493 aaKnown RBP21.4■■□□□ 1.02
GTF3A-204ENST00000438571 TMEM240Q5SV17 173 aa21.4■■□□□ 1.02
GTF3A-204ENST00000438571 AKNAD1Q5T1N1 836 aa21.4■■□□□ 1.02
GTF3A-204ENST00000438571 PLEKHM2Q8IWE5 1019 aa21.4■■□□□ 1.02
GTF3A-204ENST00000438571 MORC4Q8TE76 937 aa21.4■■□□□ 1.02
GTF3A-204ENST00000438571 CLEC4DQ8WXI8 215 aa21.4■■□□□ 1.02
GTF3A-204ENST00000438571 CPVLQ9H3G5 476 aa21.4■■□□□ 1.02
GTF3A-204ENST00000438571 PTPRSQ13332 1948 aa21.39■■□□□ 1.02
GTF3A-204ENST00000438571 GRXCR1A8MXD5 290 aa21.39■■□□□ 1.01
GTF3A-204ENST00000438571 SDSP20132 328 aa21.39■■□□□ 1.01
GTF3A-204ENST00000438571 DNAJB2P25686 324 aa21.39■■□□□ 1.01
GTF3A-204ENST00000438571 CYP2C18P33260 490 aa21.39■■□□□ 1.01
GTF3A-204ENST00000438571 ZNF543Q08ER8 600 aa21.39■■□□□ 1.01
GTF3A-204ENST00000438571 SLC43A3Q8NBI5 491 aa21.39■■□□□ 1.01
GTF3A-204ENST00000438571 COL25A1Q9BXS0 654 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms