RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 SUMO1P63165 101 aaKnown RBP7.98□□□□□ -1.13
SPEN-202ENST00000438066 DCAF15Q66K64 600 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 NSMFQ6X4W1 530 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 ADAT2Q7Z6V5 191 aaKnown RBP7.98□□□□□ -1.13
SPEN-202ENST00000438066 DDX1Q92499 740 aaKnown RBP7.98□□□□□ -1.13
SPEN-202ENST00000438066 ZNF512BQ96KM6 892 aaPredicted RBP7.98□□□□□ -1.13
SPEN-202ENST00000438066 SMAD5Q99717 465 aaKnown RBP7.98□□□□□ -1.13
SPEN-202ENST00000438066 ASPSCR1Q9BZE9 553 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 POGKQ9P215 609 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.98□□□□□ -1.13
SPEN-202ENST00000438066 CGNL1Q0VF96 1302 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 POLR3AO14802 1390 aaPredicted RBP7.98□□□□□ -1.13
SPEN-202ENST00000438066 ITSN1Q15811 1721 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 LOC100289279A0A1B0GTE1 492 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 DDX3YO15523 660 aaKnown RBP7.98□□□□□ -1.13
SPEN-202ENST00000438066 PPFIA3O75145 1194 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 RASGRP1O95267 797 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 LTKP29376 864 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 AFF1P51825 1210 aaKnown RBP7.98□□□□□ -1.13
SPEN-202ENST00000438066 MCL1Q07820 350 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 ZBTB37Q5TC79 503 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 LHFPL2Q6ZUX7 228 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 CCDC144CPQ8IYA2 1237 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 PPM1KQ8N3J5 372 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 FBRSQ9HAH7 460 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 RAD18Q9NS91 495 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 NDOR1Q9UHB4 597 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 GGA1Q9UJY5 639 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 STARD13Q9Y3M8 1113 aa7.98□□□□□ -1.13
SPEN-202ENST00000438066 CDC42BPGQ6DT37 1551 aa7.97□□□□□ -1.13
SPEN-202ENST00000438066 SHTN1A0MZ66 631 aa7.97□□□□□ -1.13
SPEN-202ENST00000438066 GFRA3O60609 400 aa7.97□□□□□ -1.13
SPEN-202ENST00000438066 CLEC3AO75596 197 aa7.97□□□□□ -1.13
SPEN-202ENST00000438066 FGFR1P11362 822 aa7.97□□□□□ -1.13
SPEN-202ENST00000438066 NEK4P51957 841 aa7.97□□□□□ -1.13
SPEN-202ENST00000438066 ERVK-24P63145 666 aa7.97□□□□□ -1.13
SPEN-202ENST00000438066 MTMR1Q13613 665 aa7.97□□□□□ -1.13
SPEN-202ENST00000438066 NKG7Q16617 165 aa7.97□□□□□ -1.13
SPEN-202ENST00000438066 BAHD1Q8TBE0 780 aaPredicted RBP7.97□□□□□ -1.13
SPEN-202ENST00000438066 WDR66Q8TBY9 1149 aa7.97□□□□□ -1.13
SPEN-202ENST00000438066 CCDC74BQ96LY2 380 aa7.97□□□□□ -1.13
SPEN-202ENST00000438066 KLHL25Q9H0H3 589 aa7.97□□□□□ -1.13
SPEN-202ENST00000438066 SENP2Q9HC62 589 aa7.97□□□□□ -1.13
SPEN-202ENST00000438066 NUDCQ9Y266 331 aa7.97□□□□□ -1.13
SPEN-202ENST00000438066 FANCGO15287 622 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 SCGB1D2O95969 90 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 ALBP02768 609 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 RAB27AP51159 221 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 RHBDL3P58872 404 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 ITKQ08881 620 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 MAP7Q14244 749 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 SUZ12Q15022 739 aaKnown RBP7.96□□□□□ -1.14
SPEN-202ENST00000438066 PCBP1Q15365 356 aaKnown RBP eCLIP7.96□□□□□ -1.14
SPEN-202ENST00000438066 MAP9Q49MG5 647 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 BRAPQ7Z569 592 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 HID1Q8IV36 788 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 MRPL41Q8IXM3 137 aaKnown RBP7.96□□□□□ -1.14
SPEN-202ENST00000438066 KLHL23Q8NBE8 558 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 GALNT11Q8NCW6 608 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 SLC7A14Q8TBB6 771 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 OSBP2Q969R2 916 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 KIFC2Q96AC6 838 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 MTMR8Q96EF0 704 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 SLC52A2Q9HAB3 445 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 TRIM39Q9HCM9 518 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 SETD1BQ9UPS6 1966 aaKnown RBP7.96□□□□□ -1.14
SPEN-202ENST00000438066 NRKQ7Z2Y5 1582 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 PTCH1Q13635 1447 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 PTPRUQ92729 1446 aa7.96□□□□□ -1.14
SPEN-202ENST00000438066 GNALP38405 381 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 ID3Q02535 119 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 ZNF460Q14592 562 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 SLC6A19Q695T7 634 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 PKN3Q6P5Z2 889 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 C20orf204Q6ZNR8 217 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 WAPLQ7Z5K2 1190 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 WFDC8Q8IUA0 241 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 ZNF513Q8N8E2 541 aaPredicted RBP7.95□□□□□ -1.14
SPEN-202ENST00000438066 TRIM47Q96LD4 638 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 CDK19Q9BWU1 502 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 CCDC8Q9H0W5 538 aaPredicted RBP7.95□□□□□ -1.14
SPEN-202ENST00000438066 SLC5A4Q9NY91 659 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 ADAMTS8Q9UP79 889 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 TNPO3Q9Y5L0 923 aaKnown RBP7.95□□□□□ -1.14
SPEN-202ENST00000438066 CPSF1Q10570 1443 aaKnown RBP7.95□□□□□ -1.14
SPEN-202ENST00000438066 SPDYE3A6NKU9 549 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 KPNA6O60684 536 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 ADAM11O75078 769 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 C6orf222P0C671 652 aaPredicted RBP7.95□□□□□ -1.14
SPEN-202ENST00000438066 NTF4P34130 210 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 BIRC2Q13490 618 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 GAS6Q14393 721 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 HP1BP3Q5SSJ5 553 aaPredicted RBP7.95□□□□□ -1.14
SPEN-202ENST00000438066 C8orf86Q6ZUL3 223 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 FGD2Q7Z6J4 655 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 AHI1Q8N157 1196 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 BVESQ8NE79 360 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 MKRN2Q9H000 416 aaKnown RBP7.95□□□□□ -1.14
SPEN-202ENST00000438066 TERF2IPQ9NYB0 399 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 ZIM2Q9NZV7 527 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms