RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 EPHB4P54760 987 aa5.29□□□□□ -1.56
LINC01239-202ENST00000436786 KLRC3Q07444 240 aa5.29□□□□□ -1.56
LINC01239-202ENST00000436786 TSHZ3Q63HK5 1081 aa5.29□□□□□ -1.56
LINC01239-202ENST00000436786 SNRNP48Q6IEG0 339 aaKnown RBP5.29□□□□□ -1.56
LINC01239-202ENST00000436786 RNF180Q86T96 592 aa5.29□□□□□ -1.56
LINC01239-202ENST00000436786 OSBP2Q969R2 916 aa5.29□□□□□ -1.56
LINC01239-202ENST00000436786 CDX2Q99626 313 aaPredicted RBP5.29□□□□□ -1.56
LINC01239-202ENST00000436786 SEMA6BQ9H3T3 888 aa5.29□□□□□ -1.56
LINC01239-202ENST00000436786 NYAP2Q9P242 653 aa5.29□□□□□ -1.56
LINC01239-202ENST00000436786 CLIP2Q9UDT6 1046 aa5.29□□□□□ -1.56
LINC01239-202ENST00000436786 CNPY2Q9Y2B0 182 aa5.29□□□□□ -1.56
LINC01239-202ENST00000436786 PCDHGA10Q9Y5H3 936 aa5.29□□□□□ -1.56
LINC01239-202ENST00000436786 TACC3Q9Y6A5 838 aa5.29□□□□□ -1.56
LINC01239-202ENST00000436786 LTBP2Q14767 1821 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 IGKV6D-41A0A0C4DH26 115 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 M0R2C6 588 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 KIAA0355O15063 1070 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 PQBP1O60828 265 aaKnown RBP5.28□□□□□ -1.56
LINC01239-202ENST00000436786 ADAMTS4O75173 837 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 PRDM1O75626 825 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 CLTBP09497 229 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 AKR1A1P14550 325 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 ACLYP53396 1101 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 GIMAP6Q6P9H5 292 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.28□□□□□ -1.56
LINC01239-202ENST00000436786 CPXCR1Q8N123 301 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 KBTBD3Q8NAB2 608 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 PRPF38AQ8NAV1 312 aaKnown RBP5.28□□□□□ -1.56
LINC01239-202ENST00000436786 DDX11Q96FC9 970 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 PRR14Q9BWN1 585 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 COL25A1Q9BXS0 654 aaPredicted RBP5.28□□□□□ -1.56
LINC01239-202ENST00000436786 TEX13BQ9BXU2 312 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 BAZ2AQ9UIF9 1905 aaKnown RBP5.28□□□□□ -1.56
LINC01239-202ENST00000436786 SYNRGQ9UMZ2 1314 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 PARP14Q460N5 1801 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 DNAJC25-GNG10A0A024R161 153 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 ZBED4O75132 1171 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 APPP05067 770 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 SMAD3P84022 425 aaKnown RBP5.28□□□□□ -1.56
LINC01239-202ENST00000436786 FAAP100Q0VG06 881 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 KCNA10Q16322 511 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 PPP1R15BQ5SWA1 713 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 CCSAPQ6IQ19 270 aaPredicted RBP5.28□□□□□ -1.56
LINC01239-202ENST00000436786 MAMDC4Q6UXC1 1216 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 ZNF444Q8N0Y2 327 aaPredicted RBP5.28□□□□□ -1.56
LINC01239-202ENST00000436786 MSL3Q8N5Y2 521 aaKnown RBP5.28□□□□□ -1.56
LINC01239-202ENST00000436786 KLHDC9Q8NEP7 349 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 APPBP2Q92624 585 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 MKL1Q969V6 931 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 TSEN34Q9BSV6 310 aaKnown RBP5.28□□□□□ -1.56
LINC01239-202ENST00000436786 TTYH1Q9H313 450 aaPredicted RBP5.28□□□□□ -1.56
LINC01239-202ENST00000436786 RAVER2Q9HCJ3 691 aaKnown RBP5.28□□□□□ -1.56
LINC01239-202ENST00000436786 EPB41L4AQ9HCS5 686 aaPredicted RBP5.28□□□□□ -1.56
LINC01239-202ENST00000436786 TMEM39AQ9NV64 488 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 ZHX1Q9UKY1 873 aaPredicted RBP5.28□□□□□ -1.56
LINC01239-202ENST00000436786 FAM184BQ9ULE4 1060 aa5.28□□□□□ -1.56
LINC01239-202ENST00000436786 ROBO3Q96MS0 1386 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 SYNGAP1Q96PV0 1343 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 MYADML2A6NDP7 307 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 PATL2C9JE40 543 aaKnown RBP5.27□□□□□ -1.57
LINC01239-202ENST00000436786 TNFRSF10AO00220 468 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 ATP2A1O14983 1001 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 GPAA1O43292 621 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 ADCY6O43306 1168 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 ZFYP08048 801 aaPredicted RBP5.27□□□□□ -1.57
LINC01239-202ENST00000436786 RAG1P15918 1043 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 TDO2P48775 406 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 ANKRD33Q7Z3H0 272 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 NPAS3Q8IXF0 933 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 TMEM151AQ8N4L1 468 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 MYLIPQ8WY64 445 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 CHMP4CQ96CF2 233 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 CEP95Q96GE4 821 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 RNPC3Q96LT9 517 aaKnown RBP5.27□□□□□ -1.57
LINC01239-202ENST00000436786 FGD4Q96M96 766 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 TOX2Q96NM4 488 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 SEC62Q99442 399 aaKnown RBP5.27□□□□□ -1.57
LINC01239-202ENST00000436786 DCTPP1Q9H773 170 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 SLC38A10Q9HBR0 1119 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 MTMR4Q9NYA4 1195 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 FEM1BQ9UK73 627 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 CTDP1Q9Y5B0 961 aaPredicted RBP5.27□□□□□ -1.57
LINC01239-202ENST00000436786 COL11A1P12107 1806 aaPredicted RBP5.27□□□□□ -1.57
LINC01239-202ENST00000436786 LAMA3Q16787 3333 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 COL6A3P12111 3177 aa5.27□□□□□ -1.57
LINC01239-202ENST00000436786 DCDC2CA8MYV0 355 aa5.26□□□□□ -1.57
LINC01239-202ENST00000436786 DUSP11O75319 330 aaKnown RBP5.26□□□□□ -1.57
LINC01239-202ENST00000436786 TTLL1O95922 423 aa5.26□□□□□ -1.57
LINC01239-202ENST00000436786 GNAT2P19087 354 aa5.26□□□□□ -1.57
LINC01239-202ENST00000436786 FPGSQ05932 587 aa5.26□□□□□ -1.57
LINC01239-202ENST00000436786 ACVR2BQ13705 512 aa5.26□□□□□ -1.57
LINC01239-202ENST00000436786 CCDC144BQ3MJ40 725 aa5.26□□□□□ -1.57
LINC01239-202ENST00000436786 XP32Q5T750 250 aa5.26□□□□□ -1.57
LINC01239-202ENST00000436786 SLFN13Q68D06 897 aa5.26□□□□□ -1.57
LINC01239-202ENST00000436786 IFNL3Q8IZI9 196 aa5.26□□□□□ -1.57
LINC01239-202ENST00000436786 LRRC47Q8N1G4 583 aaKnown RBP5.26□□□□□ -1.57
LINC01239-202ENST00000436786 ANKRD35Q8N283 1001 aa5.26□□□□□ -1.57
LINC01239-202ENST00000436786 GMCL1P1Q8NEA9 526 aa5.26□□□□□ -1.57
LINC01239-202ENST00000436786 MAFAQ8NHW3 353 aaPredicted RBP5.26□□□□□ -1.57
LINC01239-202ENST00000436786 NUP133Q8WUM0 1156 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 204.8 ms