RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 BTDP43251 543 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 KLK7P49862 253 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 STK4Q13043 487 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 NONOQ15233 471 aaKnown RBP eCLIP13.23□□□□□ -0.29
CD44-209ENST00000433892 WHAMMP3Q1A5X7 153 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 ZNF804AQ7Z570 1209 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 CTAGE6Q86UF2 777 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 CTAGE4Q8IX94 777 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 MSANTD4Q8NCY6 345 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 LZTS2Q9BRK4 669 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 AGPAT5Q9NUQ2 364 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.23□□□□□ -0.29
CD44-209ENST00000433892 COL24A1Q17RW2 1714 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 ENC1O14682 589 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 LDHCP07864 332 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 FCER1AP12319 257 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 TRIM21P19474 475 aaKnown RBP13.23□□□□□ -0.29
CD44-209ENST00000433892 DNM2P50570 870 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 ASIC1P78348 528 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 PIP4K2BP78356 416 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 ST5P78524 1137 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 AMPD2Q01433 879 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 MCM6Q14566 821 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 BEND6Q5SZJ8 279 aaPredicted RBP13.23□□□□□ -0.29
CD44-209ENST00000433892 ANKRD40Q6AI12 368 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 KRT25Q7Z3Z0 450 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 DHTKD1Q96HY7 919 aaPredicted RBP13.23□□□□□ -0.29
CD44-209ENST00000433892 AK8Q96MA6 479 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 SPZ1Q9BXG8 430 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 SUGCTQ9HAC7 445 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 EXOC1Q9NV70 894 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 RAB21Q9UL25 225 aa13.23□□□□□ -0.29
CD44-209ENST00000433892 POTEB2H3BUK9 544 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 MAP2K7O14733 419 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 SRGNP10124 158 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 RFC4P35249 363 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 GYS2P54840 703 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 HERVK_113P62684 666 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 NEK8Q86SG6 692 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 TEX11Q8IYF3 940 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 NOA1Q8NC60 698 aaKnown RBP13.22□□□□□ -0.29
CD44-209ENST00000433892 HNRNPLLQ8WVV9 542 aaKnown RBP13.22□□□□□ -0.29
CD44-209ENST00000433892 P2RX5Q93086 422 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 HPS3Q969F9 1004 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 CUEDC2Q9H467 287 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 C6orf50Q9HD87 102 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 ABCB6Q9NP58 842 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 HDAC6Q9UBN7 1215 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 BIN2Q9UBW5 565 aaPredicted RBP13.22□□□□□ -0.29
CD44-209ENST00000433892 TNRC6CQ9HCJ0 1690 aaKnown RBP13.22□□□□□ -0.29
CD44-209ENST00000433892 CCDC66A2RUB6 948 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 RASSF10A6NK89 507 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 NKRFO15226 690 aaKnown RBP eCLIP13.22□□□□□ -0.29
CD44-209ENST00000433892 GNA11P29992 359 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 VSNL1P62760 191 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 TBC1D8BQ0IIM8 1120 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 CCDC122Q5T0U0 273 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 C16orf86Q6ZW13 317 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 TBCKQ8TEA7 893 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 RRP36Q96EU6 259 aaKnown RBP13.22□□□□□ -0.29
CD44-209ENST00000433892 CEP95Q96GE4 821 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 CNOT6LQ96LI5 555 aaKnown RBP13.22□□□□□ -0.29
CD44-209ENST00000433892 PIGSQ96S52 555 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 UBA5Q9GZZ9 404 aa13.22□□□□□ -0.29
CD44-209ENST00000433892 SEC63Q9UGP8 760 aaKnown RBP13.22□□□□□ -0.29
CD44-209ENST00000433892 EP400Q96L91 3159 aa13.21□□□□□ -0.29
CD44-209ENST00000433892 H3BQF6 201 aa13.21□□□□□ -0.29
CD44-209ENST00000433892 ZBTB22O15209 634 aa13.21□□□□□ -0.29
CD44-209ENST00000433892 CCNE1P24864 410 aa13.21□□□□□ -0.29
CD44-209ENST00000433892 GPSM2P81274 684 aa13.21□□□□□ -0.29
CD44-209ENST00000433892 SOGA3Q5TF21 947 aa13.21□□□□□ -0.29
CD44-209ENST00000433892 NOC3LQ8WTT2 800 aaKnown RBP13.21□□□□□ -0.29
CD44-209ENST00000433892 CCDC47Q96A33 483 aaKnown RBP13.21□□□□□ -0.29
CD44-209ENST00000433892 PCMTD1Q96MG8 357 aaPredicted RBP13.21□□□□□ -0.29
CD44-209ENST00000433892 C8orf37Q96NL8 207 aa13.21□□□□□ -0.29
CD44-209ENST00000433892 MMTAG2Q9BU76 263 aaKnown RBP13.21□□□□□ -0.29
CD44-209ENST00000433892 HAUS4Q9H6D7 363 aa13.21□□□□□ -0.29
CD44-209ENST00000433892 MAGEF1Q9HAY2 307 aa13.21□□□□□ -0.29
CD44-209ENST00000433892 SNED1Q8TER0 1413 aa13.21□□□□□ -0.3
CD44-209ENST00000433892 TXKP42681 527 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 MTIF2P46199 727 aaKnown RBP13.2□□□□□ -0.3
CD44-209ENST00000433892 TUBB4BP68371 445 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 SEMA3FQ13275 785 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 CNBD1Q8NA66 436 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 NEDD1Q8NHV4 660 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 C7orf25Q9BPX7 421 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 TTYH3Q9C0H2 523 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 DNAJC5Q9H3Z4 198 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 PDE11AQ9HCR9 933 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 CD209Q9NNX6 404 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 TMEM260Q9NX78 707 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 SBF2Q86WG5 1849 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 GOLGB1Q14789 3259 aaKnown RBP13.2□□□□□ -0.3
CD44-209ENST00000433892 NAV1Q8NEY1 1877 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 BICDL2A1A5D9 508 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 USP17L5A8MUK1 530 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 PSMD14O00487 310 aa13.2□□□□□ -0.3
CD44-209ENST00000433892 SRGAP2O75044 1071 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms