RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 ERCC3P19447 782 aa17.72■□□□□ 0.43
CNOT9-205ENST00000433439 ANP32AP39687 249 aaKnown RBP17.72■□□□□ 0.43
CNOT9-205ENST00000433439 SP3Q02447 781 aa17.72■□□□□ 0.43
CNOT9-205ENST00000433439 BECN1Q14457 450 aa17.72■□□□□ 0.43
CNOT9-205ENST00000433439 TRERF1Q96PN7 1200 aa17.72■□□□□ 0.43
CNOT9-205ENST00000433439 CFHR5Q9BXR6 569 aa17.72■□□□□ 0.43
CNOT9-205ENST00000433439 RBM27Q9P2N5 1060 aaKnown RBP17.72■□□□□ 0.43
CNOT9-205ENST00000433439 ATP2A1O14983 1001 aa17.71■□□□□ 0.43
CNOT9-205ENST00000433439 DEXIO95424 95 aa17.71■□□□□ 0.43
CNOT9-205ENST00000433439 PKN1Q16512 942 aa17.71■□□□□ 0.43
CNOT9-205ENST00000433439 PFKFB3Q16875 520 aaPredicted RBP17.71■□□□□ 0.43
CNOT9-205ENST00000433439 MUM1L1Q5H9M0 696 aa17.71■□□□□ 0.43
CNOT9-205ENST00000433439 WWC2Q6AWC2 1192 aa17.71■□□□□ 0.43
CNOT9-205ENST00000433439 FAM184AQ8NB25 1140 aa17.71■□□□□ 0.43
CNOT9-205ENST00000433439 AIFM3Q96NN9 605 aa17.71■□□□□ 0.43
CNOT9-205ENST00000433439 LLPHQ9BRT6 129 aaKnown RBP17.71■□□□□ 0.43
CNOT9-205ENST00000433439 SMC3Q9UQE7 1217 aa17.71■□□□□ 0.43
CNOT9-205ENST00000433439 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.71■□□□□ 0.43
CNOT9-205ENST00000433439 ABCB11O95342 1321 aa17.71■□□□□ 0.42
CNOT9-205ENST00000433439 SLC25A27O95847 323 aa17.7■□□□□ 0.42
CNOT9-205ENST00000433439 NAPAP54920 295 aa17.7■□□□□ 0.42
CNOT9-205ENST00000433439 KIF22Q14807 665 aa17.7■□□□□ 0.42
CNOT9-205ENST00000433439 NSMFQ6X4W1 530 aa17.7■□□□□ 0.42
CNOT9-205ENST00000433439 PNMA2Q9UL42 364 aa17.7■□□□□ 0.42
CNOT9-205ENST00000433439 MRPL11Q9Y3B7 192 aaKnown RBP17.7■□□□□ 0.42
CNOT9-205ENST00000433439 SMCHD1A6NHR9 2005 aa17.7■□□□□ 0.42
CNOT9-205ENST00000433439 STK36Q9NRP7 1315 aa17.7■□□□□ 0.42
CNOT9-205ENST00000433439 CCDC85CA6NKD9 419 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 NFIBO00712 420 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 FKTNO75072 461 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 FDPSP14324 419 aaKnown RBP17.69■□□□□ 0.42
CNOT9-205ENST00000433439 PSMC4P43686 418 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 HMGN5P82970 282 aaKnown RBP17.69■□□□□ 0.42
CNOT9-205ENST00000433439 TRAF1Q13077 416 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 CUL4AQ13619 759 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 TKFCQ3LXA3 575 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 CD99L2Q8TCZ2 262 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 ZNF296Q8WUU4 475 aaPredicted RBP17.69■□□□□ 0.42
CNOT9-205ENST00000433439 WASF1Q92558 559 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 ALG1Q9BT22 464 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 ARHGAP39Q9C0H5 1083 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 MROH8Q9H579 483 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 ACAD9Q9H845 621 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 VPS54Q9P1Q0 977 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 IVNS1ABPQ9Y6Y0 642 aa17.69■□□□□ 0.42
CNOT9-205ENST00000433439 STXBP3O00186 592 aa17.68■□□□□ 0.42
CNOT9-205ENST00000433439 TNPO2O14787 897 aaKnown RBP17.68■□□□□ 0.42
CNOT9-205ENST00000433439 GJB2P29033 226 aa17.68■□□□□ 0.42
CNOT9-205ENST00000433439 MAPK4P31152 587 aa17.68■□□□□ 0.42
CNOT9-205ENST00000433439 COPB2P35606 906 aa17.68■□□□□ 0.42
CNOT9-205ENST00000433439 LACTBP83111 547 aaPredicted RBP17.68■□□□□ 0.42
CNOT9-205ENST00000433439 SHCBP1Q8NEM2 672 aa17.68■□□□□ 0.42
CNOT9-205ENST00000433439 CHST13Q8NET6 341 aa17.68■□□□□ 0.42
CNOT9-205ENST00000433439 SMARCC2Q8TAQ2 1214 aa17.68■□□□□ 0.42
CNOT9-205ENST00000433439 MMP19Q99542 508 aa17.68■□□□□ 0.42
CNOT9-205ENST00000433439 FBXO40Q9UH90 709 aa17.68■□□□□ 0.42
CNOT9-205ENST00000433439 RBM19Q9Y4C8 960 aaKnown RBP17.68■□□□□ 0.42
CNOT9-205ENST00000433439 CFBP00751 764 aa17.67■□□□□ 0.42
CNOT9-205ENST00000433439 CTGFP29279 349 aa17.67■□□□□ 0.42
CNOT9-205ENST00000433439 FCGRTP55899 365 aa17.67■□□□□ 0.42
CNOT9-205ENST00000433439 KCTD2Q14681 263 aa17.67■□□□□ 0.42
CNOT9-205ENST00000433439 TYW1BQ6NUM6 668 aa17.67■□□□□ 0.42
CNOT9-205ENST00000433439 GPR142Q7Z601 462 aa17.67■□□□□ 0.42
CNOT9-205ENST00000433439 PLEKHH3Q7Z736 793 aa17.67■□□□□ 0.42
CNOT9-205ENST00000433439 ANKRD35Q8N283 1001 aa17.67■□□□□ 0.42
CNOT9-205ENST00000433439 CLEC4DQ8WXI8 215 aa17.67■□□□□ 0.42
CNOT9-205ENST00000433439 TBC1D5Q92609 795 aa17.67■□□□□ 0.42
CNOT9-205ENST00000433439 GJB4Q9NTQ9 266 aa17.67■□□□□ 0.42
CNOT9-205ENST00000433439 BARHL2Q9NY43 387 aa17.67■□□□□ 0.42
CNOT9-205ENST00000433439 ZSWIM8A7E2V4 1837 aa17.67■□□□□ 0.42
CNOT9-205ENST00000433439 SMCO2A6NFE2 343 aa17.66■□□□□ 0.42
CNOT9-205ENST00000433439 HSPA8P11142 646 aaKnown RBP17.66■□□□□ 0.42
CNOT9-205ENST00000433439 FCER1AP12319 257 aa17.66■□□□□ 0.42
CNOT9-205ENST00000433439 NLRP5P59047 1200 aa17.66■□□□□ 0.42
CNOT9-205ENST00000433439 GUCY1B3Q02153 619 aa17.66■□□□□ 0.42
CNOT9-205ENST00000433439 CCDC12Q8WUD4 166 aaPredicted RBP17.66■□□□□ 0.42
CNOT9-205ENST00000433439 ERO1AQ96HE7 468 aa17.66■□□□□ 0.42
CNOT9-205ENST00000433439 KCNJ14Q9UNX9 436 aa17.66■□□□□ 0.42
CNOT9-205ENST00000433439 hCG_1984214I3L0E3 225 aa17.65■□□□□ 0.42
CNOT9-205ENST00000433439 XBP1P17861 261 aa17.65■□□□□ 0.42
CNOT9-205ENST00000433439 PTPREP23469 700 aa17.65■□□□□ 0.42
CNOT9-205ENST00000433439 CALML3P27482 149 aa17.65■□□□□ 0.42
CNOT9-205ENST00000433439 HOXA13P31271 388 aaPredicted RBP17.65■□□□□ 0.42
CNOT9-205ENST00000433439 BAATQ14032 418 aaPredicted RBP17.65■□□□□ 0.42
CNOT9-205ENST00000433439 TRIM29Q14134 588 aa17.65■□□□□ 0.42
CNOT9-205ENST00000433439 RNF207Q6ZRF8 634 aa17.65■□□□□ 0.42
CNOT9-205ENST00000433439 MCF2L2Q86YR7 1114 aa17.65■□□□□ 0.42
CNOT9-205ENST00000433439 ZNF713Q8N859 430 aaPredicted RBP17.65■□□□□ 0.42
CNOT9-205ENST00000433439 CCDC148Q8NFR7 591 aa17.65■□□□□ 0.42
CNOT9-205ENST00000433439 CUL5Q93034 780 aa17.65■□□□□ 0.42
CNOT9-205ENST00000433439 TRIM47Q96LD4 638 aa17.65■□□□□ 0.42
CNOT9-205ENST00000433439 PSTPIP2Q9H939 334 aa17.65■□□□□ 0.42
CNOT9-205ENST00000433439 A1CFQ9NQ94 594 aaKnown RBP17.65■□□□□ 0.42
CNOT9-205ENST00000433439 DAXXQ9UER7 740 aaPredicted RBP17.65■□□□□ 0.42
CNOT9-205ENST00000433439 KIF3AQ9Y496 699 aa17.65■□□□□ 0.42
CNOT9-205ENST00000433439 OPLAHO14841 1288 aa17.64■□□□□ 0.41
CNOT9-205ENST00000433439 PGK2P07205 417 aa17.64■□□□□ 0.41
CNOT9-205ENST00000433439 ADCY7P51828 1080 aa17.64■□□□□ 0.41
CNOT9-205ENST00000433439 CAP1Q01518 475 aa17.64■□□□□ 0.41
CNOT9-205ENST00000433439 UBE2SQ16763 222 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms