RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 CDC26Q8NHZ8 85 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 N4BP2L2Q92802 583 aaPredicted RBP12.48□□□□□ -0.41
SEC16A-206ENST00000431893 IVNS1ABPQ9Y6Y0 642 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 A0A0D9SFI3 127 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 SPDYE2BA6NHP3 402 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 M0QZ92 97 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 FTCDO95954 541 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 INHBAP08476 426 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 SPDYE6P0CI01 402 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 RFX1P22670 979 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 TAF11Q15544 211 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 CCDC84Q86UT8 332 aaPredicted RBP12.48□□□□□ -0.41
SEC16A-206ENST00000431893 SUGCTQ9HAC7 445 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 DDX25Q9UHL0 483 aaKnown RBP12.48□□□□□ -0.41
SEC16A-206ENST00000431893 GSTA4O15217 222 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 LRRC41Q15345 812 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 RSBN1LQ6PCB5 846 aaPredicted RBP12.48□□□□□ -0.41
SEC16A-206ENST00000431893 ZNF654Q8IZM8 581 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 GJA10Q969M2 543 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 PGBD1Q96JS3 809 aa12.48□□□□□ -0.41
SEC16A-206ENST00000431893 C1orf112Q9NSG2 853 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 PDE8AO60658 829 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 GNA14O95837 355 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 NCF2P19878 526 aaPredicted RBP12.47□□□□□ -0.41
SEC16A-206ENST00000431893 HABP4Q5JVS0 413 aaKnown RBP12.47□□□□□ -0.41
SEC16A-206ENST00000431893 ADALQ6DHV7 355 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 P4HA1P13674 534 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 ADD1P35611 737 aaKnown RBP12.47□□□□□ -0.41
SEC16A-206ENST00000431893 PDE1BQ01064 536 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 TCP11X2Q5H9J9 407 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 TMTC3Q6ZXV5 915 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 KBTBD3Q8NAB2 608 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 ACRBPQ8NEB7 543 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 DMRT2Q9Y5R5 561 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 NVLO15381 856 aaKnown RBP12.47□□□□□ -0.41
SEC16A-206ENST00000431893 SUN1O94901 812 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 PLTPP55058 493 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 ADAM9Q13443 819 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 CNOT6LQ96LI5 555 aaKnown RBP12.47□□□□□ -0.41
SEC16A-206ENST00000431893 HAUS8Q9BT25 410 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 SOWAHDA6NJG2 315 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 POLD1P28340 1107 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 MYL7Q01449 175 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 PPP1R16BQ96T49 567 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 PCDHA7Q9UN72 937 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 MRC2Q9UBG0 1479 aa12.47□□□□□ -0.41
SEC16A-206ENST00000431893 LRRN2O75325 713 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 GARSP41250 739 aaKnown RBP12.46□□□□□ -0.41
SEC16A-206ENST00000431893 CARD14Q9BXL6 1004 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 KIF9Q9HAQ2 790 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.46□□□□□ -0.411e-7■□□□□ 11.2
SEC16A-206ENST00000431893 PCDHB4Q9Y5E5 795 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 ALAS1P13196 640 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 NLRX1Q86UT6 975 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 BLIDQ8IZY5 108 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 FGD4Q96M96 766 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 PASKQ96RG2 1323 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 GPC4O75487 556 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 TNNC2P02585 160 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 GSPT1P15170 499 aaKnown RBP12.46□□□□□ -0.41
SEC16A-206ENST00000431893 IL9RQ01113 521 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 DMTNQ08495 405 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 ANKRD20A4Q4UJ75 823 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 ANKRD20A8PQ5CZ79 823 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 ANKRD20A2Q5SQ80 823 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 ANKRD20A1Q5TYW2 823 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 ARMCX5Q6P1M9 558 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 NOSTRINQ8IVI9 506 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 PSPC1Q8WXF1 523 aaKnown RBP12.46□□□□□ -0.41
SEC16A-206ENST00000431893 ZSCAN10Q96SZ4 725 aaPredicted RBP12.46□□□□□ -0.41
SEC16A-206ENST00000431893 NCAPGQ9BPX3 1015 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 MLXIPQ9HAP2 919 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 SPATS2LQ9NUQ6 558 aaKnown RBP12.46□□□□□ -0.41
SEC16A-206ENST00000431893 SCHIP1Q9P0W5 487 aaPredicted RBP12.46□□□□□ -0.41
SEC16A-206ENST00000431893 ANGPTL3Q9Y5C1 460 aa12.46□□□□□ -0.41
SEC16A-206ENST00000431893 ACTN1P12814 892 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 GAS2L3Q86XJ1 694 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 EXT2Q93063 718 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 MAGOHBQ96A72 148 aaKnown RBP12.46□□□□□ -0.42
SEC16A-206ENST00000431893 CCDC138Q96M89 665 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 CCDC68Q9H2F9 335 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 TYW1Q9NV66 732 aaKnown RBP12.46□□□□□ -0.42
SEC16A-206ENST00000431893 MRFAP1Q9Y605 127 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 FLT4P35916 1363 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 PARD3Q8TEW0 1356 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 S100BP04271 92 aaPredicted RBP12.46□□□□□ -0.42
SEC16A-206ENST00000431893 KRT10P13645 584 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 SCNN1DP51172 638 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 POLA2Q14181 598 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 PARD3BQ8TEW8 1205 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 MAML1Q92585 1016 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 HAUS1Q96CS2 278 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 AP1M1Q9BXS5 423 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 PCIF1Q9H4Z3 704 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.46□□□□□ -0.42
SEC16A-206ENST00000431893 PCDH11XQ9BZA7 1347 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 PCDH11YQ9BZA8 1340 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 TOP2BQ02880 1626 aa12.46□□□□□ -0.42
SEC16A-206ENST00000431893 TCP10L2B9ZVM9 353 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 BRD1O95696 1058 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms