RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 REC8O95072 547 aa24.93■■□□□ 1.58
CPNE1-211ENST00000420363 TRPV1Q8NER1 839 aa24.93■■□□□ 1.58
CPNE1-211ENST00000420363 DDX20Q9UHI6 824 aaKnown RBP24.93■■□□□ 1.58
CPNE1-211ENST00000420363 SEPT4O43236 478 aa24.92■■□□□ 1.58
CPNE1-211ENST00000420363 PRC1O43663 620 aa24.92■■□□□ 1.58
CPNE1-211ENST00000420363 TROAPQ12815 778 aa24.92■■□□□ 1.58
CPNE1-211ENST00000420363 KRT32Q14532 448 aa24.92■■□□□ 1.58
CPNE1-211ENST00000420363 GRM4Q14833 912 aa24.92■■□□□ 1.58
CPNE1-211ENST00000420363 CDC37Q16543 378 aaPredicted RBP24.92■■□□□ 1.58
CPNE1-211ENST00000420363 LRRC26Q2I0M4 334 aa24.92■■□□□ 1.58
CPNE1-211ENST00000420363 CHST3Q7LGC8 479 aa24.92■■□□□ 1.58
CPNE1-211ENST00000420363 FAM133AQ8N9E0 248 aa24.92■■□□□ 1.58
CPNE1-211ENST00000420363 FGD4Q96M96 766 aa24.92■■□□□ 1.58
CPNE1-211ENST00000420363 MAP3K14Q99558 947 aa24.92■■□□□ 1.58
CPNE1-211ENST00000420363 UBE2OQ9C0C9 1292 aaKnown RBP24.92■■□□□ 1.58
CPNE1-211ENST00000420363 LY9Q9HBG7 655 aa24.92■■□□□ 1.58
CPNE1-211ENST00000420363 MAD2L2Q9UI95 211 aa24.92■■□□□ 1.58
CPNE1-211ENST00000420363 LRRC37A2A6NM11 1700 aa24.92■■□□□ 1.58
CPNE1-211ENST00000420363 PALM3A6NDB9 673 aaPredicted RBP24.91■■□□□ 1.58
CPNE1-211ENST00000420363 DDAH1O94760 285 aa24.91■■□□□ 1.58
CPNE1-211ENST00000420363 MUM1L1Q5H9M0 696 aa24.91■■□□□ 1.58
CPNE1-211ENST00000420363 CATIPQ7Z7H3 387 aa24.91■■□□□ 1.58
CPNE1-211ENST00000420363 ADGRF4Q8IZF3 695 aa24.91■■□□□ 1.58
CPNE1-211ENST00000420363 TMTC2Q8N394 836 aa24.91■■□□□ 1.58
CPNE1-211ENST00000420363 SENP6Q9GZR1 1112 aaPredicted RBP24.91■■□□□ 1.58
CPNE1-211ENST00000420363 UBA5Q9GZZ9 404 aa24.91■■□□□ 1.58
CPNE1-211ENST00000420363 MAF1Q9H063 256 aa24.91■■□□□ 1.58
CPNE1-211ENST00000420363 SENP2Q9HC62 589 aa24.91■■□□□ 1.58
CPNE1-211ENST00000420363 LAMA3Q16787 3333 aa24.9■■□□□ 1.58
CPNE1-211ENST00000420363 POTEB2H3BUK9 544 aa24.9■■□□□ 1.58
CPNE1-211ENST00000420363 SH2B2O14492 632 aaPredicted RBP24.9■■□□□ 1.58
CPNE1-211ENST00000420363 LIFRP42702 1097 aa24.9■■□□□ 1.58
CPNE1-211ENST00000420363 TDHQ8IZJ6 230 aa24.9■■□□□ 1.58
CPNE1-211ENST00000420363 KCNB2Q92953 911 aa24.9■■□□□ 1.58
CPNE1-211ENST00000420363 CPVLQ9H3G5 476 aa24.9■■□□□ 1.58
CPNE1-211ENST00000420363 CYP39A1Q9NYL5 469 aa24.9■■□□□ 1.58
CPNE1-211ENST00000420363 MCM3APO60318 1980 aa24.89■■□□□ 1.58
CPNE1-211ENST00000420363 STAG2Q8N3U4 1231 aa24.89■■□□□ 1.58
CPNE1-211ENST00000420363 MTMR8Q96EF0 704 aa24.89■■□□□ 1.58
CPNE1-211ENST00000420363 NEK1Q96PY6 1258 aa24.89■■□□□ 1.58
CPNE1-211ENST00000420363 JMJD4Q9H9V9 463 aa24.89■■□□□ 1.58
CPNE1-211ENST00000420363 CNPY2Q9Y2B0 182 aa24.89■■□□□ 1.58
CPNE1-211ENST00000420363 LOC102724159A0A0B4J2E5 919 aa24.88■■□□□ 1.57
CPNE1-211ENST00000420363 KLRF2D3W0D1 207 aa24.88■■□□□ 1.57
CPNE1-211ENST00000420363 PWP2Q15269 919 aaKnown RBP24.88■■□□□ 1.57
CPNE1-211ENST00000420363 RASEFQ8IZ41 740 aa24.88■■□□□ 1.57
CPNE1-211ENST00000420363 ZNF654Q8IZM8 581 aa24.88■■□□□ 1.57
CPNE1-211ENST00000420363 CLEC4DQ8WXI8 215 aa24.88■■□□□ 1.57
CPNE1-211ENST00000420363 ABCB11O95342 1321 aa24.87■■□□□ 1.57
CPNE1-211ENST00000420363 NFIBO00712 420 aa24.87■■□□□ 1.57
CPNE1-211ENST00000420363 DHX16O60231 1041 aaKnown RBP24.87■■□□□ 1.57
CPNE1-211ENST00000420363 TAL1P17542 331 aaPredicted RBP24.87■■□□□ 1.57
CPNE1-211ENST00000420363 HSPA4P34932 840 aa24.87■■□□□ 1.57
CPNE1-211ENST00000420363 QRICH1Q2TAL8 776 aa24.87■■□□□ 1.57
CPNE1-211ENST00000420363 LRIT3Q3SXY7 679 aa24.87■■□□□ 1.57
CPNE1-211ENST00000420363 GPR153Q6NV75 609 aa24.87■■□□□ 1.57
CPNE1-211ENST00000420363 NSMFQ6X4W1 530 aa24.87■■□□□ 1.57
CPNE1-211ENST00000420363 SGMS1Q86VZ5 419 aa24.87■■□□□ 1.57
CPNE1-211ENST00000420363 RGS22Q8NE09 1264 aa24.87■■□□□ 1.57
CPNE1-211ENST00000420363 ASB14A6NK59 587 aa24.86■■□□□ 1.57
CPNE1-211ENST00000420363 DNM1LO00429 736 aa24.86■■□□□ 1.57
CPNE1-211ENST00000420363 SNAI1O95863 264 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-211ENST00000420363 HMGB1P09429 215 aaKnown RBP24.86■■□□□ 1.57
CPNE1-211ENST00000420363 ZNF865P0CJ78 1059 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-211ENST00000420363 MDM2Q00987 491 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-211ENST00000420363 CNTN2Q02246 1040 aa24.86■■□□□ 1.57
CPNE1-211ENST00000420363 COL9A3Q14050 684 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-211ENST00000420363 ARMCX2Q7L311 632 aa24.86■■□□□ 1.57
CPNE1-211ENST00000420363 ARRDC4Q8NCT1 418 aa24.86■■□□□ 1.57
CPNE1-211ENST00000420363 SLC17A8Q8NDX2 589 aa24.86■■□□□ 1.57
CPNE1-211ENST00000420363 ABHD16BQ9H3Z7 469 aa24.86■■□□□ 1.57
CPNE1-211ENST00000420363 RIOX1Q9H6W3 641 aa24.86■■□□□ 1.57
CPNE1-211ENST00000420363 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-211ENST00000420363 CCDC69A6NI79 296 aa24.85■■□□□ 1.57
CPNE1-211ENST00000420363 AKR1A1P14550 325 aa24.85■■□□□ 1.57
CPNE1-211ENST00000420363 KIF5BP33176 963 aa24.85■■□□□ 1.57
CPNE1-211ENST00000420363 ATN1P54259 1190 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-211ENST00000420363 USH1GQ495M9 461 aa24.85■■□□□ 1.57
CPNE1-211ENST00000420363 PRAMEF19Q5SWL8 479 aa24.85■■□□□ 1.57
CPNE1-211ENST00000420363 FBXO11Q86XK2 927 aa24.85■■□□□ 1.57
CPNE1-211ENST00000420363 GPHNQ9NQX3 736 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-211ENST00000420363 SOWAHBA6NEL2 793 aa24.84■■□□□ 1.57
CPNE1-211ENST00000420363 ZBTB5O15062 677 aa24.84■■□□□ 1.57
CPNE1-211ENST00000420363 CALM1P0DP23 149 aa24.84■■□□□ 1.57
CPNE1-211ENST00000420363 CALM2P0DP24 149 aa24.84■■□□□ 1.57
CPNE1-211ENST00000420363 CALM3P0DP25 149 aa24.84■■□□□ 1.57
CPNE1-211ENST00000420363 ADCK5Q3MIX3 580 aa24.84■■□□□ 1.57
CPNE1-211ENST00000420363 DHX32Q7L7V1 743 aaKnown RBP24.84■■□□□ 1.57
CPNE1-211ENST00000420363 CCDC144CPQ8IYA2 1237 aa24.84■■□□□ 1.57
CPNE1-211ENST00000420363 DEFB123Q8N688 67 aa24.84■■□□□ 1.57
CPNE1-211ENST00000420363 CTCFLQ8NI51 663 aaPredicted RBP24.84■■□□□ 1.57
CPNE1-211ENST00000420363 LBHD1Q9BQE6 289 aaPredicted RBP24.84■■□□□ 1.57
CPNE1-211ENST00000420363 ADD3Q9UEY8 706 aaKnown RBP24.84■■□□□ 1.57
CPNE1-211ENST00000420363 ASTN1O14525 1302 aa24.84■■□□□ 1.57
CPNE1-211ENST00000420363 PTPDC1A2A3K4 754 aa24.83■■□□□ 1.57
CPNE1-211ENST00000420363 EXOSC10Q01780 885 aaKnown RBP24.83■■□□□ 1.57
CPNE1-211ENST00000420363 TRAF1Q13077 416 aa24.83■■□□□ 1.57
CPNE1-211ENST00000420363 BAATQ14032 418 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-211ENST00000420363 GJC2Q5T442 439 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-211ENST00000420363 NFXL1Q6ZNB6 911 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms