RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 PPP1R18Q6NYC8 613 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 CPLX2Q6PUV4 134 aaKnown RBP13.8□□□□□ -0.2
ATG4B-207ENST00000415107 NCAPG2Q86XI2 1143 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 FBXO11Q86XK2 927 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 CCAR1Q8IX12 1150 aaKnown RBP13.8□□□□□ -0.2
ATG4B-207ENST00000415107 CCDC144CPQ8IYA2 1237 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 PXYLP1Q8TE99 480 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 PIGSQ96S52 555 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 NUDT12Q9BQG2 462 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 SLKQ9H2G2 1235 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-207ENST00000415107 RNF146Q9NTX7 359 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 SEC63Q9UGP8 760 aaKnown RBP13.8□□□□□ -0.2
ATG4B-207ENST00000415107 PFASO15067 1338 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 STK36Q9NRP7 1315 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 DOCK3Q8IZD9 2030 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 PPP1R11O60927 126 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-207ENST00000415107 RGS2P41220 211 aa13.79□□□□□ -0.2
ATG4B-207ENST00000415107 MAP2K5Q13163 448 aa13.79□□□□□ -0.2
ATG4B-207ENST00000415107 KCTD2Q14681 263 aa13.79□□□□□ -0.2
ATG4B-207ENST00000415107 CCDC174Q6PII3 467 aa13.79□□□□□ -0.2
ATG4B-207ENST00000415107 FBXO46Q6PJ61 603 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-207ENST00000415107 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-207ENST00000415107 RAB11FIP4Q86YS3 637 aa13.79□□□□□ -0.2
ATG4B-207ENST00000415107 TRMT44Q8IYL2 757 aaKnown RBP13.79□□□□□ -0.2
ATG4B-207ENST00000415107 CLEC4DQ8WXI8 215 aa13.79□□□□□ -0.2
ATG4B-207ENST00000415107 TRERF1Q96PN7 1200 aa13.79□□□□□ -0.2
ATG4B-207ENST00000415107 APBA2Q99767 749 aa13.79□□□□□ -0.2
ATG4B-207ENST00000415107 PTPN22Q9Y2R2 807 aa13.79□□□□□ -0.2
ATG4B-207ENST00000415107 MRPL11Q9Y3B7 192 aaKnown RBP13.79□□□□□ -0.2
ATG4B-207ENST00000415107 TRIM17Q9Y577 477 aa13.79□□□□□ -0.2
ATG4B-207ENST00000415107 HTTP42858 3142 aa13.78□□□□□ -0.2
ATG4B-207ENST00000415107 ALAS1P13196 640 aa13.78□□□□□ -0.2
ATG4B-207ENST00000415107 ADORA2AP29274 412 aa13.78□□□□□ -0.2
ATG4B-207ENST00000415107 FLT3LGP49771 235 aa13.78□□□□□ -0.2
ATG4B-207ENST00000415107 PRKCZQ05513 592 aa13.78□□□□□ -0.2
ATG4B-207ENST00000415107 ZNF467Q7Z7K2 595 aaPredicted RBP13.78□□□□□ -0.2
ATG4B-207ENST00000415107 MCF2L2Q86YR7 1114 aa13.78□□□□□ -0.2
ATG4B-207ENST00000415107 MSL3Q8N5Y2 521 aaKnown RBP13.78□□□□□ -0.2
ATG4B-207ENST00000415107 MMP19Q99542 508 aa13.78□□□□□ -0.2
ATG4B-207ENST00000415107 A1CFQ9NQ94 594 aaKnown RBP13.78□□□□□ -0.2
ATG4B-207ENST00000415107 SLC5A4Q9NY91 659 aa13.78□□□□□ -0.2
ATG4B-207ENST00000415107 BAZ2BQ9UIF8 2168 aaKnown RBP13.78□□□□□ -0.2
ATG4B-207ENST00000415107 ESYT2A0FGR8 921 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 SMCHD1A6NHR9 2005 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 PIK3CDO00329 1044 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 CPLX1O14810 134 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 OPLAHO14841 1288 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 LCTP09848 1927 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 SNAP25P60880 206 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 CCT2P78371 535 aaKnown RBP13.77□□□□□ -0.21
ATG4B-207ENST00000415107 PFKFB3Q16875 520 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-207ENST00000415107 ZNF792Q3KQV3 632 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 MUM1L1Q5H9M0 696 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 OLFML2BQ68BL8 750 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 HOMER1Q86YM7 354 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 TRIM22Q8IYM9 498 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 CMTR1Q8N1G2 835 aaKnown RBP13.77□□□□□ -0.21
ATG4B-207ENST00000415107 FAM133AQ8N9E0 248 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 LLPHQ9BRT6 129 aaKnown RBP13.77□□□□□ -0.21
ATG4B-207ENST00000415107 NCOA5Q9HCD5 579 aaKnown RBP13.77□□□□□ -0.21
ATG4B-207ENST00000415107 CWC22Q9HCG8 908 aaKnown RBP13.77□□□□□ -0.21
ATG4B-207ENST00000415107 VAT1LQ9HCJ6 419 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 BARHL2Q9NY43 387 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 CYP39A1Q9NYL5 469 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 NAP1L2Q9ULW6 460 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-207ENST00000415107 PCDHA1Q9Y5I3 950 aa13.77□□□□□ -0.21
ATG4B-207ENST00000415107 NFIBO00712 420 aa13.76□□□□□ -0.21
ATG4B-207ENST00000415107 DEXIO95424 95 aa13.76□□□□□ -0.21
ATG4B-207ENST00000415107 LARGE1O95461 756 aa13.76□□□□□ -0.21
ATG4B-207ENST00000415107 SCG2P13521 617 aa13.76□□□□□ -0.21
ATG4B-207ENST00000415107 HSD17B4P51659 736 aa13.76□□□□□ -0.21
ATG4B-207ENST00000415107 ST3GAL1Q11201 340 aa13.76□□□□□ -0.21
ATG4B-207ENST00000415107 PKN1Q16512 942 aa13.76□□□□□ -0.21
ATG4B-207ENST00000415107 MAMDC4Q6UXC1 1216 aa13.76□□□□□ -0.21
ATG4B-207ENST00000415107 SLAIN1Q8ND83 568 aa13.76□□□□□ -0.21
ATG4B-207ENST00000415107 SNX21Q969T3 373 aa13.76□□□□□ -0.21
ATG4B-207ENST00000415107 GLT8D2Q9H1C3 349 aa13.76□□□□□ -0.21
ATG4B-207ENST00000415107 SH3GLB2Q9NR46 395 aa13.76□□□□□ -0.21
ATG4B-207ENST00000415107 GABRQQ9UN88 632 aa13.76□□□□□ -0.21
ATG4B-207ENST00000415107 ZNFX1Q9P2E3 1918 aaKnown RBP13.76□□□□□ -0.21
ATG4B-207ENST00000415107 PLXNA1Q9UIW2 1896 aa13.76□□□□□ -0.21
ATG4B-207ENST00000415107 COBLO75128 1261 aa13.75□□□□□ -0.21
ATG4B-207ENST00000415107 CD2BP2O95400 341 aaKnown RBP13.75□□□□□ -0.21
ATG4B-207ENST00000415107 CTDNEP1O95476 244 aa13.75□□□□□ -0.21
ATG4B-207ENST00000415107 RPS6P62753 249 aaKnown RBP13.75□□□□□ -0.21
ATG4B-207ENST00000415107 USH1GQ495M9 461 aa13.75□□□□□ -0.21
ATG4B-207ENST00000415107 WDR78Q5VTH9 848 aa13.75□□□□□ -0.21
ATG4B-207ENST00000415107 ANKRD35Q8N283 1001 aa13.75□□□□□ -0.21
ATG4B-207ENST00000415107 NSUN7Q8NE18 718 aaKnown RBP13.75□□□□□ -0.21
ATG4B-207ENST00000415107 DNERQ8NFT8 737 aa13.75□□□□□ -0.21
ATG4B-207ENST00000415107 SMARCC2Q8TAQ2 1214 aa13.75□□□□□ -0.21
ATG4B-207ENST00000415107 CCDC12Q8WUD4 166 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-207ENST00000415107 LARP6Q9BRS8 491 aaKnown RBP13.75□□□□□ -0.21
ATG4B-207ENST00000415107 HOMER2Q9NSB8 354 aa13.75□□□□□ -0.21
ATG4B-207ENST00000415107 NRBP1Q9UHY1 535 aa13.75□□□□□ -0.21
ATG4B-207ENST00000415107 V9GY48 417 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-207ENST00000415107 FRMPD4Q14CM0 1322 aa13.74□□□□□ -0.21
ATG4B-207ENST00000415107 SYNGAP1Q96PV0 1343 aa13.74□□□□□ -0.21
ATG4B-207ENST00000415107 STXBP3O00186 592 aa13.74□□□□□ -0.21
ATG4B-207ENST00000415107 AKAP17AQ02040 695 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms