RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 BAZ2BQ9UIF8 2168 aaKnown RBP13.08□□□□□ -0.32
RFFL-204ENST00000414419 WDR19Q8NEZ3 1342 aa13.08□□□□□ -0.32
RFFL-204ENST00000414419 COL6A1P12109 1028 aa13.07□□□□□ -0.32
RFFL-204ENST00000414419 CDC37Q16543 378 aaPredicted RBP13.07□□□□□ -0.32
RFFL-204ENST00000414419 USH1GQ495M9 461 aa13.07□□□□□ -0.32
RFFL-204ENST00000414419 STOX1Q6ZVD7 989 aa13.07□□□□□ -0.32
RFFL-204ENST00000414419 CATIPQ7Z7H3 387 aa13.07□□□□□ -0.32
RFFL-204ENST00000414419 RNF180Q86T96 592 aa13.07□□□□□ -0.32
RFFL-204ENST00000414419 C7orf61Q8IZ16 206 aa13.07□□□□□ -0.32
RFFL-204ENST00000414419 ADGRF4Q8IZF3 695 aa13.07□□□□□ -0.32
RFFL-204ENST00000414419 MPHOSPH6Q99547 160 aaKnown RBP13.07□□□□□ -0.32
RFFL-204ENST00000414419 CPVLQ9H3G5 476 aa13.07□□□□□ -0.32
RFFL-204ENST00000414419 ADD3Q9UEY8 706 aaKnown RBP13.07□□□□□ -0.32
RFFL-204ENST00000414419 KLRF2D3W0D1 207 aa13.06□□□□□ -0.32
RFFL-204ENST00000414419 NFIBO00712 420 aa13.06□□□□□ -0.32
RFFL-204ENST00000414419 SLC27A2O14975 620 aa13.06□□□□□ -0.32
RFFL-204ENST00000414419 CALML3P27482 149 aa13.06□□□□□ -0.32
RFFL-204ENST00000414419 MCM5P33992 734 aa13.06□□□□□ -0.32
RFFL-204ENST00000414419 BAATQ14032 418 aaPredicted RBP13.06□□□□□ -0.32
RFFL-204ENST00000414419 LRRC41Q15345 812 aa13.06□□□□□ -0.32
RFFL-204ENST00000414419 CREB3L3Q68CJ9 461 aa13.06□□□□□ -0.32
RFFL-204ENST00000414419 RNF207Q6ZRF8 634 aa13.06□□□□□ -0.32
RFFL-204ENST00000414419 FGD4Q96M96 766 aa13.06□□□□□ -0.32
RFFL-204ENST00000414419 SPC25Q9HBM1 224 aa13.06□□□□□ -0.32
RFFL-204ENST00000414419 TAF6LQ9Y6J9 622 aa13.06□□□□□ -0.32
RFFL-204ENST00000414419 SOWAHBA6NEL2 793 aa13.05□□□□□ -0.32
RFFL-204ENST00000414419 B4DLN1 442 aa13.05□□□□□ -0.32
RFFL-204ENST00000414419 PGK1P00558 417 aa13.05□□□□□ -0.32
RFFL-204ENST00000414419 MRPL12P52815 198 aaKnown RBP13.05□□□□□ -0.32
RFFL-204ENST00000414419 ATN1P54259 1190 aaPredicted RBP13.05□□□□□ -0.32
RFFL-204ENST00000414419 NECTIN1Q15223 517 aa13.05□□□□□ -0.32
RFFL-204ENST00000414419 CCDC144BQ3MJ40 725 aa13.05□□□□□ -0.32
RFFL-204ENST00000414419 NFXL1Q6ZNB6 911 aa13.05□□□□□ -0.32
RFFL-204ENST00000414419 NOL8Q76FK4 1167 aaKnown RBP13.05□□□□□ -0.32
RFFL-204ENST00000414419 FBXO11Q86XK2 927 aa13.05□□□□□ -0.32
RFFL-204ENST00000414419 MB21D2Q8IYB1 491 aaPredicted RBP13.05□□□□□ -0.32
RFFL-204ENST00000414419 TMTC2Q8N394 836 aa13.05□□□□□ -0.32
RFFL-204ENST00000414419 STAG2Q8N3U4 1231 aa13.05□□□□□ -0.32
RFFL-204ENST00000414419 ABCB11O95342 1321 aa13.05□□□□□ -0.32
RFFL-204ENST00000414419 LCTP09848 1927 aa13.05□□□□□ -0.32
RFFL-204ENST00000414419 PALM3A6NDB9 673 aaPredicted RBP13.04□□□□□ -0.32
RFFL-204ENST00000414419 PRC1O43663 620 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 DUSP11O75319 330 aaKnown RBP13.04□□□□□ -0.32
RFFL-204ENST00000414419 ADCYAP1R1P41586 468 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 TRAF1Q13077 416 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 GRM4Q14833 912 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 LRRC26Q2I0M4 334 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 QRICH1Q2TAL8 776 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 ERICH6BQ5W0A0 696 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 CHRDL2Q6WN34 429 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 MCF2L2Q86YR7 1114 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 IGDCC4Q8TDY8 1250 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 NUP133Q8WUM0 1156 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 CLEC4DQ8WXI8 215 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 FERMT2Q96AC1 680 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 TMEM87BQ96K49 555 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 MTA3Q9BTC8 594 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 AMNQ9BXJ7 453 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 JMJD4Q9H9V9 463 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 MAD2L2Q9UI95 211 aa13.04□□□□□ -0.32
RFFL-204ENST00000414419 MRPL11Q9Y3B7 192 aaKnown RBP13.04□□□□□ -0.32
RFFL-204ENST00000414419 LOC102724159A0A0B4J2E5 919 aa13.03□□□□□ -0.32
RFFL-204ENST00000414419 CCDC69A6NI79 296 aa13.03□□□□□ -0.32
RFFL-204ENST00000414419 C6orf222P0C671 652 aaPredicted RBP13.03□□□□□ -0.32
RFFL-204ENST00000414419 ALDH5A1P51649 535 aaPredicted RBP13.03□□□□□ -0.32
RFFL-204ENST00000414419 ANTXR2P58335 489 aa13.03□□□□□ -0.32
RFFL-204ENST00000414419 RPS6P62753 249 aaKnown RBP13.03□□□□□ -0.32
RFFL-204ENST00000414419 TNFAIP2Q03169 654 aa13.03□□□□□ -0.32
RFFL-204ENST00000414419 PWP2Q15269 919 aaKnown RBP13.03□□□□□ -0.32
RFFL-204ENST00000414419 SLC39A5Q6ZMH5 540 aa13.03□□□□□ -0.32
RFFL-204ENST00000414419 EEPD1Q7L9B9 569 aa13.03□□□□□ -0.32
RFFL-204ENST00000414419 PCSK9Q8NBP7 692 aaKnown RBP13.03□□□□□ -0.32
RFFL-204ENST00000414419 RGS22Q8NE09 1264 aa13.03□□□□□ -0.32
RFFL-204ENST00000414419 DNERQ8NFT8 737 aa13.03□□□□□ -0.32
RFFL-204ENST00000414419 CTCFLQ8NI51 663 aaPredicted RBP13.03□□□□□ -0.32
RFFL-204ENST00000414419 LENG1Q96BZ8 264 aaPredicted RBP13.03□□□□□ -0.32
RFFL-204ENST00000414419 PURBQ96QR8 312 aaKnown RBP13.03□□□□□ -0.32
RFFL-204ENST00000414419 MAF1Q9H063 256 aa13.03□□□□□ -0.32
RFFL-204ENST00000414419 SENP2Q9HC62 589 aa13.03□□□□□ -0.32
RFFL-204ENST00000414419 PRKAG2Q9UGJ0 569 aa13.03□□□□□ -0.32
RFFL-204ENST00000414419 ZMYND8Q9ULU4 1186 aaPredicted RBP13.03□□□□□ -0.32
RFFL-204ENST00000414419 COLQQ9Y215 455 aaPredicted RBP13.03□□□□□ -0.32
RFFL-204ENST00000414419 ZBTB5O15062 677 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 SYN1P17600 705 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 KIF5BP33176 963 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 RTP1P59025 263 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 PDE4DQ08499 809 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 TROAPQ12815 778 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 IQSEC1Q6DN90 963 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 SLC30A10Q6XR72 485 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 HOMER1Q86YM7 354 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 ZNF654Q8IZM8 581 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 NEK1Q96PY6 1258 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 TSEN34Q9BSV6 310 aaKnown RBP13.02□□□□□ -0.33
RFFL-204ENST00000414419 AP5M1Q9H0R1 490 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 LY9Q9HBG7 655 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 VTA1Q9NP79 307 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 PHF24Q9UPV7 400 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 ATP11BQ9Y2G3 1177 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms