RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 MYH6P13533 1939 aa11.44□□□□□ -0.58
DDB1-202ENST00000414411 SPDYE16A6NNV3 312 aaPredicted RBP11.44□□□□□ -0.58
DDB1-202ENST00000414411 PDHXO00330 501 aa11.44□□□□□ -0.58
DDB1-202ENST00000414411 IGF2BP3O00425 579 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDB1-202ENST00000414411 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
DDB1-202ENST00000414411 PPFIA3O75145 1194 aa11.44□□□□□ -0.58
DDB1-202ENST00000414411 FMNL1O95466 1100 aaPredicted RBP11.44□□□□□ -0.58
DDB1-202ENST00000414411 HSPA6P17066 643 aa11.44□□□□□ -0.58
DDB1-202ENST00000414411 KIF23Q02241 960 aaPredicted RBP11.44□□□□□ -0.58
DDB1-202ENST00000414411 PABPC4Q13310 644 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDB1-202ENST00000414411 PKN1Q16512 942 aa11.44□□□□□ -0.58
DDB1-202ENST00000414411 FAM173BQ6P4H8 233 aa11.44□□□□□ -0.58
DDB1-202ENST00000414411 LBX2Q6XYB7 198 aa11.44□□□□□ -0.58
DDB1-202ENST00000414411 PIGSQ96S52 555 aa11.44□□□□□ -0.58
DDB1-202ENST00000414411 ASCC2Q9H1I8 757 aaPredicted RBP11.44□□□□□ -0.58
DDB1-202ENST00000414411 VAT1LQ9HCJ6 419 aa11.44□□□□□ -0.58
DDB1-202ENST00000414411 ZCCHC17Q9NP64 241 aaKnown RBP11.44□□□□□ -0.58
DDB1-202ENST00000414411 PTPDC1A2A3K4 754 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 VWA5AO00534 786 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 AOC2O75106 756 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 FDX1P10109 184 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 VEGFBP49765 207 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 SSRP1Q08945 709 aaKnown RBP11.43□□□□□ -0.58
DDB1-202ENST00000414411 IFNL1Q8IU54 200 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 REPS2Q8NFH8 660 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 KIFC2Q96AC6 838 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 SLC26A6Q9BXS9 759 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 SCAND2PQ9GZW5 306 aaPredicted RBP11.43□□□□□ -0.58
DDB1-202ENST00000414411 RANBP17Q9H2T7 1088 aaKnown RBP11.43□□□□□ -0.58
DDB1-202ENST00000414411 SLC38A10Q9HBR0 1119 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 STK36Q9NRP7 1315 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 hCG_1642624A0A1W2PR95 340 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 ZBTB5O15062 677 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 SREBF2Q12772 1141 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 IKQ13123 557 aaPredicted RBP11.43□□□□□ -0.58
DDB1-202ENST00000414411 RESTQ13127 1097 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 UVSSAQ2YD98 709 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 TRIM22Q8IYM9 498 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 ATG4CQ96DT6 458 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 RRP36Q96EU6 259 aaKnown RBP11.43□□□□□ -0.58
DDB1-202ENST00000414411 DDX11Q96FC9 970 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 FUCA2Q9BTY2 467 aa11.43□□□□□ -0.58
DDB1-202ENST00000414411 ZNF536O15090 1300 aa11.42□□□□□ -0.58
DDB1-202ENST00000414411 PNMA6FA0A0J9YX94 578 aa11.42□□□□□ -0.58
DDB1-202ENST00000414411 PPP1R11O60927 126 aaPredicted RBP11.42□□□□□ -0.58
DDB1-202ENST00000414411 DEXIO95424 95 aa11.42□□□□□ -0.58
DDB1-202ENST00000414411 OSBPP22059 807 aa11.42□□□□□ -0.58
DDB1-202ENST00000414411 MAP2K2P36507 400 aa11.42□□□□□ -0.58
DDB1-202ENST00000414411 SNAP25P60880 206 aa11.42□□□□□ -0.58
DDB1-202ENST00000414411 HERVK_113P62684 666 aa11.42□□□□□ -0.58
DDB1-202ENST00000414411 IRX3P78415 501 aaPredicted RBP11.42□□□□□ -0.58
DDB1-202ENST00000414411 HMGN5P82970 282 aaKnown RBP11.42□□□□□ -0.58
DDB1-202ENST00000414411 GRM1Q13255 1194 aa11.42□□□□□ -0.58
DDB1-202ENST00000414411 PFKFB3Q16875 520 aaPredicted RBP11.42□□□□□ -0.58
DDB1-202ENST00000414411 QRICH1Q2TAL8 776 aa11.42□□□□□ -0.58
DDB1-202ENST00000414411 KCTD17Q8N5Z5 321 aa11.42□□□□□ -0.58
DDB1-202ENST00000414411 ORC3Q9UBD5 711 aaPredicted RBP11.42□□□□□ -0.58
DDB1-202ENST00000414411 NOL7Q9UMY1 257 aaKnown RBP11.42□□□□□ -0.58
DDB1-202ENST00000414411 COL11A1P12107 1806 aaPredicted RBP11.42□□□□□ -0.58
DDB1-202ENST00000414411 CYP2C8P10632 490 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 CDC37Q16543 378 aaPredicted RBP11.41□□□□□ -0.58
DDB1-202ENST00000414411 LEO1Q8WVC0 666 aaPredicted RBP11.41□□□□□ -0.58
DDB1-202ENST00000414411 PIBF1Q8WXW3 757 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 SPATA32Q96LK8 384 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 ZSCAN16Q9H4T2 348 aaPredicted RBP11.41□□□□□ -0.58
DDB1-202ENST00000414411 RBPJLQ9UBG7 517 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 PNMA3Q9UL41 463 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 ZNF214Q9UL59 606 aaPredicted RBP11.41□□□□□ -0.58
DDB1-202ENST00000414411 H3BQV1 296 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 ATP2A1O14983 1001 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 SCG2P13521 617 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 MSNP26038 577 aaKnown RBP11.41□□□□□ -0.58
DDB1-202ENST00000414411 TMEM132BQ14DG7 1078 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 IFFO2Q5TF58 517 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 OTUD7BQ6GQQ9 843 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 HOMER1Q86YM7 354 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 MB21D1Q8N884 522 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 SHISA4Q96DD7 197 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 AIFM3Q96NN9 605 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 KIF3AQ9Y496 699 aa11.41□□□□□ -0.58
DDB1-202ENST00000414411 A0A0G2JMZ2 1700 aa11.4□□□□□ -0.58
DDB1-202ENST00000414411 ZBED4O75132 1171 aa11.4□□□□□ -0.58
DDB1-202ENST00000414411 CNMDO75829 334 aa11.4□□□□□ -0.58
DDB1-202ENST00000414411 ICAM1P05362 532 aa11.4□□□□□ -0.58
DDB1-202ENST00000414411 LIG1P18858 919 aa11.4□□□□□ -0.58
DDB1-202ENST00000414411 OAZ1P54368 228 aa11.4□□□□□ -0.58
DDB1-202ENST00000414411 AKAP17AQ02040 695 aaKnown RBP11.4□□□□□ -0.58
DDB1-202ENST00000414411 AMNQ9BXJ7 453 aa11.4□□□□□ -0.58
DDB1-202ENST00000414411 TXNRD2Q9NNW7 524 aa11.4□□□□□ -0.58
DDB1-202ENST00000414411 BARHL2Q9NY43 387 aa11.4□□□□□ -0.58
DDB1-202ENST00000414411 BTBD7Q9P203 1132 aa11.4□□□□□ -0.58
DDB1-202ENST00000414411 TFIP11Q9UBB9 837 aaKnown RBP11.4□□□□□ -0.58
DDB1-202ENST00000414411 CCDC39Q9UFE4 941 aa11.4□□□□□ -0.58
DDB1-202ENST00000414411 SEC63Q9UGP8 760 aaKnown RBP11.4□□□□□ -0.58
DDB1-202ENST00000414411 RABGAP1Q9Y3P9 1069 aa11.4□□□□□ -0.58
DDB1-202ENST00000414411 ADGRA2Q96PE1 1338 aa11.4□□□□□ -0.59
DDB1-202ENST00000414411 WWC2Q6AWC2 1192 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 TYW1BQ6NUM6 668 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 GTF3C2Q8WUA4 911 aaPredicted RBP11.39□□□□□ -0.59
DDB1-202ENST00000414411 WASF1Q92558 559 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms