RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 TBC1D8O95759 1140 aa5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 MPOP05164 745 aa5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 SSBP05455 408 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 NAT2P11245 290 aa5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 CFPP27918 469 aa5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 RBM25P49756 843 aaKnown RBP5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 CORO7P57737 925 aa5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 LINC00310P59036 64 aa5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 TNNI3KQ59H18 835 aa5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 EEF1DP3Q658K8 133 aa5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 JAMLQ86YT9 394 aa5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 ZSCAN18Q8TBC5 510 aaPredicted RBP5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 MCMBPQ9BTE3 642 aa5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 MBD1Q9UIS9 605 aaPredicted RBP5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 STXBP3O00186 592 aa5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 FGRP09769 529 aa5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 SDHBP21912 280 aa5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 VIPR1P32241 457 aa5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 SRSF3P84103 164 aaKnown RBP5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 AMPD2Q01433 879 aa5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 MVKQ03426 396 aa5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 TMEM62Q0P6H9 643 aa5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 TMEM132EQ6IEE7 984 aa5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 SPOCD1Q6ZMY3 1216 aa5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 ACTR10Q9NZ32 417 aa5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 APEX2Q9UBZ4 518 aa5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 SUGT1Q9Y2Z0 365 aa5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 BACE2Q9Y5Z0 518 aa5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 MRVI1Q9Y6F6 885 aa5.59□□□□□ -1.51
RNU4-55P-201ENST00000410731 A0A1W2PQ27 194 aa5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 A0A1W2PQ64 194 aa5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 A0A1W2PQC6 194 aa5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 A0A1W2PQD8 194 aa5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 SRGAP3O43295 1099 aa5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 VAMP4O75379 141 aa5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 MSL3P1P0C860 447 aa5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 L1CAMP32004 1257 aa5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 CRACR2BQ8N4Y2 399 aaPredicted RBP5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 IGSF5Q9NSI5 407 aa5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 SIRT5Q9NXA8 310 aa5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 KLHL14Q9P2G3 628 aa5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 PRKAG3Q9UGI9 489 aa5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 ARID1BQ8NFD5 2236 aaPredicted RBP5.58□□□□□ -1.52
RNU4-55P-201ENST00000410731 SEPHS1P49903 392 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 ARID5AQ03989 594 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 CBX2Q14781 532 aaPredicted RBP5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 NR1I3Q14994 352 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 RAB3GAP1Q15042 981 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 DPY19L1Q2PZI1 675 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 CIAPIN1Q6FI81 312 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 POMZP3Q6PJE2 187 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 RPTNQ6XPR3 784 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 BVESQ8NE79 360 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 NLGN2Q8NFZ4 835 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 APBA2Q99767 749 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 SGPP1Q9BX95 441 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 CNTD2Q9H8S5 307 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 PDLIM7Q9NR12 457 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 AKT3Q9Y243 479 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 EMC9Q9Y3B6 208 aa5.57□□□□□ -1.52
RNU4-55P-201ENST00000410731 C2orf71A6NGG8 1288 aa5.56□□□□□ -1.52
RNU4-55P-201ENST00000410731 NUDT19A8MXV4 375 aa5.56□□□□□ -1.52
RNU4-55P-201ENST00000410731 RBM10P98175 930 aaKnown RBP5.56□□□□□ -1.52
RNU4-55P-201ENST00000410731 PLEKHN1Q494U1 663 aaPredicted RBP5.56□□□□□ -1.52
RNU4-55P-201ENST00000410731 LARP1BQ659C4 914 aaKnown RBP5.56□□□□□ -1.52
RNU4-55P-201ENST00000410731 C6orf15Q6UXA7 325 aaPredicted RBP5.56□□□□□ -1.52
RNU4-55P-201ENST00000410731 LCNL1Q6ZST4 164 aa5.56□□□□□ -1.52
RNU4-55P-201ENST00000410731 TMC6Q7Z403 805 aa5.56□□□□□ -1.52
RNU4-55P-201ENST00000410731 MCF2L2Q86YR7 1114 aa5.56□□□□□ -1.52
RNU4-55P-201ENST00000410731 SIAH1Q8IUQ4 282 aa5.56□□□□□ -1.52
RNU4-55P-201ENST00000410731 FAM178BQ8IXR5 827 aa5.56□□□□□ -1.52
RNU4-55P-201ENST00000410731 SLC43A3Q8NBI5 491 aa5.56□□□□□ -1.52
RNU4-55P-201ENST00000410731 ZNF408Q9H9D4 720 aa5.56□□□□□ -1.52
RNU4-55P-201ENST00000410731 TRBV23OR9-2A0A075B6M9 112 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 RFXAPO00287 272 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 N4BP3O15049 544 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 NUAK1O60285 661 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 KCNH1O95259 989 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 CYBBP04839 570 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 DBHP09172 617 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 ZSCAN22P10073 491 aaPredicted RBP5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 PAMP19021 973 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 ETFBP38117 255 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 MAPKAPK2P49137 400 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 CDR1P51861 262 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 EPHB3P54753 998 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 PAQR3Q6TCH7 311 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 AMIGO3Q86WK7 504 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 TRIM59Q8IWR1 403 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 SIGLEC10Q96LC7 697 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 PODXL2Q9NZ53 605 aa5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 CNOT6Q9ULM6 557 aaKnown RBP5.55□□□□□ -1.52
RNU4-55P-201ENST00000410731 A0A1W2PQJ5 194 aa5.54□□□□□ -1.52
RNU4-55P-201ENST00000410731 B2RBV5 119 aa5.54□□□□□ -1.52
RNU4-55P-201ENST00000410731 NOP56O00567 594 aaKnown RBP5.54□□□□□ -1.52
RNU4-55P-201ENST00000410731 IRS4O14654 1257 aaPredicted RBP5.54□□□□□ -1.52
RNU4-55P-201ENST00000410731 FXNQ16595 210 aa5.54□□□□□ -1.52
RNU4-55P-201ENST00000410731 BICRALQ6AI39 1079 aa5.54□□□□□ -1.52
RNU4-55P-201ENST00000410731 ZC3H14Q6PJT7 736 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms