RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 SMYD4Q8IYR2 804 aaPredicted RBP6.46□□□□□ -1.37
R3HDM1-202ENST00000409478 CCDC197Q8NCU1 140 aa6.46□□□□□ -1.37
R3HDM1-202ENST00000409478 NELFBQ8WX92 580 aa6.46□□□□□ -1.37
R3HDM1-202ENST00000409478 LRRC45Q96CN5 670 aa6.46□□□□□ -1.37
R3HDM1-202ENST00000409478 L3MBTL3Q96JM7 780 aaPredicted RBP6.46□□□□□ -1.37
R3HDM1-202ENST00000409478 DDX21Q9NR30 783 aaKnown RBP eCLIP6.46□□□□□ -1.37
R3HDM1-202ENST00000409478 IRAK4Q9NWZ3 460 aa6.46□□□□□ -1.37
R3HDM1-202ENST00000409478 SLC12A4Q9UP95 1085 aa6.46□□□□□ -1.37
R3HDM1-202ENST00000409478 PDS5AQ29RF7 1337 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 GRID2IPA4D2P6 1211 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 RCCD1A6NED2 376 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 GOLGA8AA7E2F4 631 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 ORC4O43929 436 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 RTN3O95197 1032 aaPredicted RBP6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 IFIT1P09914 478 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 ALADP13716 330 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 PPARAQ07869 468 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 ITIH4Q14624 930 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 NTRK3Q16288 839 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 ZC3H12AQ5D1E8 599 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 IFT81Q8WYA0 676 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 FERMT2Q96AC1 680 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 PLCD4Q9BRC7 762 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 EPB41L5Q9HCM4 733 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 TFR2Q9UP52 801 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 BTBD18B2RXH4 712 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 KCNQ3O43525 872 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 PARP1P09874 1014 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 TRIM21P19474 475 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 CARSP49589 748 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 GUCY2DQ02846 1103 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 ZNF268Q14587 947 aaPredicted RBP6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 QPCTQ16769 361 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 KIAA0753Q2KHM9 967 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 ODF2Q5BJF6 829 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 EPHA10Q5JZY3 1008 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 ZNF658Q5TYW1 1059 aaPredicted RBP6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 TRIM22Q8IYM9 498 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 RPUSD2Q8IZ73 545 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 CCDC42Q96M95 316 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 RBM12Q9NTZ6 932 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 MAGEC2Q9UBF1 373 aaPredicted RBP6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 PCDHB6Q9Y5E3 794 aa6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 PARP4Q9UKK3 1724 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-202ENST00000409478 ABCC12Q96J65 1359 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 HEG1Q9ULI3 1381 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 A0A1W2PQJ5 194 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 ABLIM1O14639 778 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 FAM153BP0C7A2 387 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 PAPOLAP51003 745 aaKnown RBP6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 ROR2Q01974 943 aaKnown RBP6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 MKRN4PQ13434 485 aaPredicted RBP6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 MTMR3Q13615 1198 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 BYSLQ13895 437 aaKnown RBP6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 IFI16Q16666 785 aaKnown RBP6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 FAM153CQ494X1 144 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 CWF19L1Q69YN2 538 aaKnown RBP6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 NFRKBQ6P4R8 1299 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 ZNF507Q8TCN5 953 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 NUP133Q8WUM0 1156 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 OSBP2Q969R2 916 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 CENPTQ96BT3 561 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 NEUROD6Q96NK8 337 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 SLC26A6Q9BXS9 759 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 IFIH1Q9BYX4 1025 aaKnown RBP6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 THAP9Q9H5L6 903 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 LGR6Q9HBX8 967 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 LRWD1Q9UFC0 647 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 FAM153AQ9UHL3 310 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 NWD2Q9ULI1 1742 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 STXBP3O00186 592 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 ATP2C2O75185 946 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 GLI1P08151 1106 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 GUCY2FP51841 1108 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 HSPA2P54652 639 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 AKAP4Q5JQC9 854 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 NFXL1Q6ZNB6 911 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 MICU3Q86XE3 530 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 RAPGEF5Q92565 580 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 CHMP6Q96FZ7 201 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 ZNF570Q96NI8 536 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 YIPF3Q9GZM5 350 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 NDST4Q9H3R1 872 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 SLC5A4Q9NY91 659 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 ECM29Q5VYK3 1845 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 A6NHS1 94 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 H7C1W4 665 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 RANBP6O60518 1105 aaKnown RBP6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 CLTAP09496 248 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 GCLCP48506 637 aaPredicted RBP6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 CUL1Q13616 776 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 PNMA8AQ86V59 439 aaPredicted RBP6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 SGMS1Q86VZ5 419 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 TSC22D3Q99576 134 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 METTL22Q9BUU2 404 aaPredicted RBP6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 TTYH3Q9C0H2 523 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 SENP2Q9HC62 589 aa6.45□□□□□ -1.38
R3HDM1-202ENST00000409478 POLD4Q9HCU8 107 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms