RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 OAZ1P54368 228 aa19.94■□□□□ 0.78
CHMP3-203ENST00000409225 TTLL4Q14679 1199 aa19.94■□□□□ 0.78
CHMP3-203ENST00000409225 LRRC47Q8N1G4 583 aaKnown RBP19.94■□□□□ 0.78
CHMP3-203ENST00000409225 VWCEQ96DN2 955 aa19.94■□□□□ 0.78
CHMP3-203ENST00000409225 HAUS7Q99871 368 aa19.94■□□□□ 0.78
CHMP3-203ENST00000409225 ACAD9Q9H845 621 aa19.94■□□□□ 0.78
CHMP3-203ENST00000409225 ISY1Q9ULR0 285 aaKnown RBP19.94■□□□□ 0.78
CHMP3-203ENST00000409225 PRRC2BQ5JSZ5 2229 aaKnown RBP19.93■□□□□ 0.78
CHMP3-203ENST00000409225 ASB14A6NK59 587 aa19.93■□□□□ 0.78
CHMP3-203ENST00000409225 TMEM67Q5HYA8 995 aa19.93■□□□□ 0.78
CHMP3-203ENST00000409225 KRT40Q6A162 431 aa19.93■□□□□ 0.78
CHMP3-203ENST00000409225 DEFB128Q7Z7B8 93 aa19.93■□□□□ 0.78
CHMP3-203ENST00000409225 PANK1Q8TE04 598 aa19.93■□□□□ 0.78
CHMP3-203ENST00000409225 AGBL1Q96MI9 1066 aa19.93■□□□□ 0.78
CHMP3-203ENST00000409225 SEZ6LQ9BYH1 1024 aa19.93■□□□□ 0.78
CHMP3-203ENST00000409225 A1CFQ9NQ94 594 aaKnown RBP19.93■□□□□ 0.78
CHMP3-203ENST00000409225 PDGFCQ9NRA1 345 aa19.93■□□□□ 0.78
CHMP3-203ENST00000409225 COG6Q9Y2V7 657 aa19.93■□□□□ 0.78
CHMP3-203ENST00000409225 MYH7P12883 1935 aa19.92■□□□□ 0.78
CHMP3-203ENST00000409225 MYH4Q9Y623 1939 aa19.92■□□□□ 0.78
CHMP3-203ENST00000409225 IGKV6D-41A0A0C4DH26 115 aa19.92■□□□□ 0.78
CHMP3-203ENST00000409225 EPOPA6NHQ4 379 aa19.92■□□□□ 0.78
CHMP3-203ENST00000409225 SBK1Q52WX2 424 aa19.92■□□□□ 0.78
CHMP3-203ENST00000409225 ZSCAN25Q6NSZ9 544 aa19.92■□□□□ 0.78
CHMP3-203ENST00000409225 EEPD1Q7L9B9 569 aa19.92■□□□□ 0.78
CHMP3-203ENST00000409225 FBXO16Q8IX29 292 aaPredicted RBP19.92■□□□□ 0.78
CHMP3-203ENST00000409225 CEP95Q96GE4 821 aa19.92■□□□□ 0.78
CHMP3-203ENST00000409225 ALDH8A1Q9H2A2 487 aaPredicted RBP19.92■□□□□ 0.78
CHMP3-203ENST00000409225 RNF146Q9NTX7 359 aa19.92■□□□□ 0.78
CHMP3-203ENST00000409225 LRRC37A2A6NM11 1700 aa19.91■□□□□ 0.78
CHMP3-203ENST00000409225 PRDM1O75626 825 aa19.91■□□□□ 0.78
CHMP3-203ENST00000409225 CYP2C9P11712 490 aa19.91■□□□□ 0.78
CHMP3-203ENST00000409225 TMEM31Q5JXX7 168 aa19.91■□□□□ 0.78
CHMP3-203ENST00000409225 TMEM63BQ5T3F8 832 aa19.91■□□□□ 0.78
CHMP3-203ENST00000409225 SLFN13Q68D06 897 aa19.91■□□□□ 0.78
CHMP3-203ENST00000409225 MKL1Q969V6 931 aa19.91■□□□□ 0.78
CHMP3-203ENST00000409225 STRBPQ96SI9 672 aaKnown RBP19.91■□□□□ 0.78
CHMP3-203ENST00000409225 TRMT13Q9NUP7 481 aaKnown RBP19.91■□□□□ 0.78
CHMP3-203ENST00000409225 COG5Q9UP83 839 aa19.91■□□□□ 0.78
CHMP3-203ENST00000409225 GSG1L2A8MUP6 293 aa19.9■□□□□ 0.78
CHMP3-203ENST00000409225 TMEM232C9JQI7 657 aa19.9■□□□□ 0.78
CHMP3-203ENST00000409225 BMP3P12645 472 aa19.9■□□□□ 0.78
CHMP3-203ENST00000409225 POU3F3P20264 500 aaPredicted RBP19.9■□□□□ 0.78
CHMP3-203ENST00000409225 ZNF444Q8N0Y2 327 aaPredicted RBP19.9■□□□□ 0.78
CHMP3-203ENST00000409225 GMCL1P1Q8NEA9 526 aa19.9■□□□□ 0.78
CHMP3-203ENST00000409225 ARNTL2Q8WYA1 636 aa19.9■□□□□ 0.78
CHMP3-203ENST00000409225 CHMP4CQ96CF2 233 aa19.9■□□□□ 0.78
CHMP3-203ENST00000409225 MTMR4Q9NYA4 1195 aa19.9■□□□□ 0.78
CHMP3-203ENST00000409225 ARIH1Q9Y4X5 557 aaPredicted RBP19.9■□□□□ 0.78
CHMP3-203ENST00000409225 TLL1O43897 1013 aa19.89■□□□□ 0.77
CHMP3-203ENST00000409225 RAB11FIP3O75154 756 aa19.89■□□□□ 0.77
CHMP3-203ENST00000409225 HMMRO75330 724 aa19.89■□□□□ 0.77
CHMP3-203ENST00000409225 TTLL1O95922 423 aa19.89■□□□□ 0.77
CHMP3-203ENST00000409225 PFKMP08237 780 aa19.89■□□□□ 0.77
CHMP3-203ENST00000409225 ALAS1P13196 640 aa19.89■□□□□ 0.77
CHMP3-203ENST00000409225 IKQ13123 557 aaPredicted RBP19.89■□□□□ 0.77
CHMP3-203ENST00000409225 IQSEC1Q6DN90 963 aa19.89■□□□□ 0.77
CHMP3-203ENST00000409225 TAPT1Q6NXT6 567 aa19.89■□□□□ 0.77
CHMP3-203ENST00000409225 TRERF1Q96PN7 1200 aa19.89■□□□□ 0.77
CHMP3-203ENST00000409225 ZNF536O15090 1300 aa19.88■□□□□ 0.77
CHMP3-203ENST00000409225 TNKSO95271 1327 aa19.88■□□□□ 0.77
CHMP3-203ENST00000409225 CCER2I3L3R5 266 aa19.88■□□□□ 0.77
CHMP3-203ENST00000409225 ARHGEF15O94989 841 aa19.88■□□□□ 0.77
CHMP3-203ENST00000409225 FDX1P10109 184 aa19.88■□□□□ 0.77
CHMP3-203ENST00000409225 STAT2P52630 851 aa19.88■□□□□ 0.77
CHMP3-203ENST00000409225 Q9Y3F1 56 aa19.88■□□□□ 0.77
CHMP3-203ENST00000409225 TRANK1O15050 2925 aa19.88■□□□□ 0.77
CHMP3-203ENST00000409225 SCN5AQ14524 2016 aa19.87■□□□□ 0.77
CHMP3-203ENST00000409225 FAM86C2PA6NEL3 165 aa19.87■□□□□ 0.77
CHMP3-203ENST00000409225 SUPT20HL2P0C7V6 817 aa19.87■□□□□ 0.77
CHMP3-203ENST00000409225 ACTN1P12814 892 aa19.87■□□□□ 0.77
CHMP3-203ENST00000409225 TKFCQ3LXA3 575 aa19.87■□□□□ 0.77
CHMP3-203ENST00000409225 GIMAP6Q6P9H5 292 aa19.87■□□□□ 0.77
CHMP3-203ENST00000409225 KIAA1211Q6ZU35 1233 aa19.87■□□□□ 0.77
CHMP3-203ENST00000409225 SIRT2Q8IXJ6 389 aa19.87■□□□□ 0.77
CHMP3-203ENST00000409225 RPAP2Q8IXW5 612 aaPredicted RBP19.87■□□□□ 0.77
CHMP3-203ENST00000409225 KHSRPQ92945 711 aaKnown RBP eCLIP19.87■□□□□ 0.775e-6■■■■□ 19.6
CHMP3-203ENST00000409225 HLA-CQ95604 372 aa19.87■□□□□ 0.77
CHMP3-203ENST00000409225 SLC9A7Q96T83 725 aa19.87■□□□□ 0.77
CHMP3-203ENST00000409225 EPB41L4AQ9HCS5 686 aaPredicted RBP19.87■□□□□ 0.77
CHMP3-203ENST00000409225 SYNPO2Q9UMS6 1093 aa19.87■□□□□ 0.77
CHMP3-203ENST00000409225 MYL3P08590 195 aa19.86■□□□□ 0.77
CHMP3-203ENST00000409225 TDO2P48775 406 aa19.86■□□□□ 0.77
CHMP3-203ENST00000409225 SNAP25P60880 206 aa19.86■□□□□ 0.77
CHMP3-203ENST00000409225 TAP1Q03518 808 aa19.86■□□□□ 0.77
CHMP3-203ENST00000409225 MUM1L1Q5H9M0 696 aa19.86■□□□□ 0.77
CHMP3-203ENST00000409225 FAM160B2Q86V87 743 aa19.86■□□□□ 0.77
CHMP3-203ENST00000409225 CHURC1Q8WUH1 139 aa19.86■□□□□ 0.77
CHMP3-203ENST00000409225 ZNF287Q9HBT7 754 aa19.86■□□□□ 0.77
CHMP3-203ENST00000409225 FAM47CQ5HY64 1035 aa19.85■□□□□ 0.77
CHMP3-203ENST00000409225 NSMFQ6X4W1 530 aa19.85■□□□□ 0.77
CHMP3-203ENST00000409225 STAG1Q8WVM7 1258 aa19.85■□□□□ 0.77
CHMP3-203ENST00000409225 OSBP2Q969R2 916 aa19.85■□□□□ 0.77
CHMP3-203ENST00000409225 PURBQ96QR8 312 aaKnown RBP19.85■□□□□ 0.77
CHMP3-203ENST00000409225 FTOQ9C0B1 505 aaKnown RBP eCLIP19.85■□□□□ 0.77
CHMP3-203ENST00000409225 VTA1Q9NP79 307 aa19.85■□□□□ 0.77
CHMP3-203ENST00000409225 C11orf16Q9NQ32 467 aa19.85■□□□□ 0.77
CHMP3-203ENST00000409225 POLR3EQ9NVU0 708 aa19.85■□□□□ 0.77
CHMP3-203ENST00000409225 CYP39A1Q9NYL5 469 aa19.85■□□□□ 0.77
CHMP3-203ENST00000409225 APPP05067 770 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms