RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 ALAS1P13196 640 aa20.48■□□□□ 0.87
CTNS-203ENST00000399306 RXRAP19793 462 aa20.48■□□□□ 0.87
CTNS-203ENST00000399306 ADORA2AP29274 412 aa20.48■□□□□ 0.87
CTNS-203ENST00000399306 FUT2Q10981 343 aa20.48■□□□□ 0.87
CTNS-203ENST00000399306 TEX2Q8IWB9 1127 aa20.48■□□□□ 0.87
CTNS-203ENST00000399306 VAT1LQ9HCJ6 419 aa20.48■□□□□ 0.87
CTNS-203ENST00000399306 MRPL11Q9Y3B7 192 aaKnown RBP20.48■□□□□ 0.87
CTNS-203ENST00000399306 PTCH2Q9Y6C5 1203 aa20.48■□□□□ 0.87
CTNS-203ENST00000399306 DNAJC25-GNG10A0A024R161 153 aa20.47■□□□□ 0.87
CTNS-203ENST00000399306 PLEKHA8P1O95397 391 aa20.47■□□□□ 0.87
CTNS-203ENST00000399306 AK2P54819 239 aa20.47■□□□□ 0.87
CTNS-203ENST00000399306 SNAP25P60880 206 aa20.47■□□□□ 0.87
CTNS-203ENST00000399306 GHRHRQ02643 423 aa20.47■□□□□ 0.87
CTNS-203ENST00000399306 CCDC144CPQ8IYA2 1237 aa20.47■□□□□ 0.87
CTNS-203ENST00000399306 MAP3K20Q9NYL2 800 aaKnown RBP20.47■□□□□ 0.87
CTNS-203ENST00000399306 SEC63Q9UGP8 760 aaKnown RBP20.47■□□□□ 0.87
CTNS-203ENST00000399306 HTTP42858 3142 aa20.46■□□□□ 0.87
CTNS-203ENST00000399306 LOC102724159A0A0B4J2E5 919 aa20.46■□□□□ 0.87
CTNS-203ENST00000399306 hCG_1984214I3L0E3 225 aa20.46■□□□□ 0.87
CTNS-203ENST00000399306 ADCY3O60266 1144 aa20.46■□□□□ 0.87
CTNS-203ENST00000399306 CDC27P30260 824 aa20.46■□□□□ 0.87
CTNS-203ENST00000399306 PWP2Q15269 919 aaKnown RBP20.46■□□□□ 0.87
CTNS-203ENST00000399306 ZNF467Q7Z7K2 595 aaPredicted RBP20.46■□□□□ 0.87
CTNS-203ENST00000399306 DPP9Q86TI2 863 aa20.46■□□□□ 0.87
CTNS-203ENST00000399306 MSL3Q8N5Y2 521 aaKnown RBP20.46■□□□□ 0.87
CTNS-203ENST00000399306 ZNF713Q8N859 430 aaPredicted RBP20.46■□□□□ 0.87
CTNS-203ENST00000399306 ARMC5Q96C12 935 aa20.46■□□□□ 0.87
CTNS-203ENST00000399306 PIGSQ96S52 555 aa20.46■□□□□ 0.87
CTNS-203ENST00000399306 CNTNAP5Q8WYK1 1306 aa20.46■□□□□ 0.87
CTNS-203ENST00000399306 PLXNA1Q9UIW2 1896 aa20.45■□□□□ 0.86
CTNS-203ENST00000399306 IGHA2P01877 340 aa20.45■□□□□ 0.86
CTNS-203ENST00000399306 IFNAR1P17181 557 aa20.45■□□□□ 0.86
CTNS-203ENST00000399306 GRK4P32298 578 aa20.45■□□□□ 0.86
CTNS-203ENST00000399306 ADD1P35611 737 aaKnown RBP20.45■□□□□ 0.86
CTNS-203ENST00000399306 OLFML2BQ68BL8 750 aa20.45■□□□□ 0.86
CTNS-203ENST00000399306 CPLX2Q6PUV4 134 aaKnown RBP20.45■□□□□ 0.86
CTNS-203ENST00000399306 MCF2L2Q86YR7 1114 aa20.45■□□□□ 0.86
CTNS-203ENST00000399306 ANKRD35Q8N283 1001 aa20.45■□□□□ 0.86
CTNS-203ENST00000399306 CLEC4DQ8WXI8 215 aa20.45■□□□□ 0.86
CTNS-203ENST00000399306 DDX11Q96FC9 970 aa20.45■□□□□ 0.86
CTNS-203ENST00000399306 A1CFQ9NQ94 594 aaKnown RBP20.45■□□□□ 0.86
CTNS-203ENST00000399306 NAP1L2Q9ULW6 460 aaPredicted RBP20.45■□□□□ 0.86
CTNS-203ENST00000399306 PFKFB2O60825 505 aa20.44■□□□□ 0.86
CTNS-203ENST00000399306 NTRK3Q16288 839 aa20.44■□□□□ 0.86
CTNS-203ENST00000399306 ZNF792Q3KQV3 632 aa20.44■□□□□ 0.86
CTNS-203ENST00000399306 MUM1L1Q5H9M0 696 aa20.44■□□□□ 0.86
CTNS-203ENST00000399306 HOMER1Q86YM7 354 aa20.44■□□□□ 0.86
CTNS-203ENST00000399306 RAB11FIP4Q86YS3 637 aa20.44■□□□□ 0.86
CTNS-203ENST00000399306 HOMER2Q9NSB8 354 aa20.44■□□□□ 0.86
CTNS-203ENST00000399306 CYP39A1Q9NYL5 469 aa20.44■□□□□ 0.86
CTNS-203ENST00000399306 PCDHA1Q9Y5I3 950 aa20.44■□□□□ 0.86
CTNS-203ENST00000399306 RBBP6Q7Z6E9 1792 aaKnown RBP20.44■□□□□ 0.86
CTNS-203ENST00000399306 PPP1R11O60927 126 aaPredicted RBP20.43■□□□□ 0.86
CTNS-203ENST00000399306 COBLO75128 1261 aa20.43■□□□□ 0.86
CTNS-203ENST00000399306 ECM2O94769 699 aaPredicted RBP20.43■□□□□ 0.86
CTNS-203ENST00000399306 HMGCRP04035 888 aa20.43■□□□□ 0.86
CTNS-203ENST00000399306 CYP2B6P20813 491 aa20.43■□□□□ 0.86
CTNS-203ENST00000399306 SLC9C1Q4G0N8 1177 aa20.43■□□□□ 0.86
CTNS-203ENST00000399306 FAM133AQ8N9E0 248 aa20.43■□□□□ 0.86
CTNS-203ENST00000399306 RNF26Q9BY78 433 aaPredicted RBP20.43■□□□□ 0.86
CTNS-203ENST00000399306 SLKQ9H2G2 1235 aaPredicted RBP20.43■□□□□ 0.86
CTNS-203ENST00000399306 TPCN1Q9ULQ1 816 aa20.43■□□□□ 0.86
CTNS-203ENST00000399306 PRPF3O43395 683 aaKnown RBP20.42■□□□□ 0.86
CTNS-203ENST00000399306 ST18O60284 1047 aa20.42■□□□□ 0.86
CTNS-203ENST00000399306 CDKL5O76039 1030 aa20.42■□□□□ 0.86
CTNS-203ENST00000399306 SLC4A3P48751 1232 aa20.42■□□□□ 0.86
CTNS-203ENST00000399306 USH1GQ495M9 461 aa20.42■□□□□ 0.86
CTNS-203ENST00000399306 FAM177A1Q8N128 213 aaPredicted RBP20.42■□□□□ 0.86
CTNS-203ENST00000399306 MAML3Q96JK9 1138 aa20.42■□□□□ 0.86
CTNS-203ENST00000399306 ZSCAN31Q96LW9 406 aaPredicted RBP20.42■□□□□ 0.86
CTNS-203ENST00000399306 NRBP1Q9UHY1 535 aa20.42■□□□□ 0.86
CTNS-203ENST00000399306 LIMCH1Q9UPQ0 1083 aa20.42■□□□□ 0.86
CTNS-203ENST00000399306 POTEB2H3BUK9 544 aa20.41■□□□□ 0.86
CTNS-203ENST00000399306 NFIBO00712 420 aa20.41■□□□□ 0.86
CTNS-203ENST00000399306 CAPN2P17655 700 aa20.41■□□□□ 0.86
CTNS-203ENST00000399306 MCM2P49736 904 aa20.41■□□□□ 0.86
CTNS-203ENST00000399306 UBXN2AP68543 259 aa20.41■□□□□ 0.86
CTNS-203ENST00000399306 PPP1R18Q6NYC8 613 aa20.41■□□□□ 0.86
CTNS-203ENST00000399306 MAMDC4Q6UXC1 1216 aa20.41■□□□□ 0.86
CTNS-203ENST00000399306 CMTR1Q8N1G2 835 aaKnown RBP20.41■□□□□ 0.86
CTNS-203ENST00000399306 NPLOC4Q8TAT6 608 aa20.41■□□□□ 0.86
CTNS-203ENST00000399306 CPLX1O14810 134 aa20.4■□□□□ 0.86
CTNS-203ENST00000399306 CCT2P78371 535 aaKnown RBP20.4■□□□□ 0.86
CTNS-203ENST00000399306 PFKFB3Q16875 520 aaPredicted RBP20.4■□□□□ 0.86
CTNS-203ENST00000399306 MAP3K21Q5TCX8 1036 aa20.4■□□□□ 0.86
CTNS-203ENST00000399306 MFSD14CQ5VZR4 134 aa20.4■□□□□ 0.86
CTNS-203ENST00000399306 NSMFQ6X4W1 530 aa20.4■□□□□ 0.86
CTNS-203ENST00000399306 RNF207Q6ZRF8 634 aa20.4■□□□□ 0.86
CTNS-203ENST00000399306 TNS4Q8IZW8 715 aa20.4■□□□□ 0.86
CTNS-203ENST00000399306 CCDC82Q8N4S0 544 aa20.4■□□□□ 0.86
CTNS-203ENST00000399306 DNERQ8NFT8 737 aa20.4■□□□□ 0.86
CTNS-203ENST00000399306 TRIB2Q92519 343 aa20.4■□□□□ 0.86
CTNS-203ENST00000399306 ZNF333Q96JL9 665 aa20.4■□□□□ 0.86
CTNS-203ENST00000399306 SYNGAP1Q96PV0 1343 aa20.4■□□□□ 0.86
CTNS-203ENST00000399306 SH2B1Q9NRF2 756 aaPredicted RBP20.4■□□□□ 0.86
CTNS-203ENST00000399306 ADD3Q9UEY8 706 aaKnown RBP20.4■□□□□ 0.86
CTNS-203ENST00000399306 V9GY48 417 aaPredicted RBP20.4■□□□□ 0.86
CTNS-203ENST00000399306 PGK2P07205 417 aa20.39■□□□□ 0.85
CTNS-203ENST00000399306 HSD17B4P51659 736 aa20.39■□□□□ 0.85
CTNS-203ENST00000399306 RPS6P62753 249 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms