RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 MOCS3O95396 460 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 GAS8O95995 478 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 EIF4A3P38919 411 aaKnown RBP12.17□□□□□ -0.46
HPS4-202ENST00000398145 ANKRD42Q8N9B4 389 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 WHAMMQ8TF30 809 aa12.17□□□□□ -0.46
HPS4-202ENST00000398145 KLRF2D3W0D1 207 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 BCRP11274 1271 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 GGCXP38435 758 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 VSNL1P62760 191 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 EXOSC10Q01780 885 aaKnown RBP12.16□□□□□ -0.46
HPS4-202ENST00000398145 PDCLQ13371 301 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 MTF1Q14872 753 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 MB21D2Q8IYB1 491 aaPredicted RBP12.16□□□□□ -0.46
HPS4-202ENST00000398145 ARHGEF2Q92974 986 aaKnown RBP12.16□□□□□ -0.46
HPS4-202ENST00000398145 TULP4Q9NRJ4 1543 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 AP5Z1O43299 807 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 GCNT3O95395 438 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 RASSF2P50749 326 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 EIF6P56537 245 aaKnown RBP12.16□□□□□ -0.46
HPS4-202ENST00000398145 DDB1Q16531 1140 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 MRPL44Q9H9J2 332 aaKnown RBP12.16□□□□□ -0.46
HPS4-202ENST00000398145 INTS9Q9NV88 658 aaKnown RBP12.16□□□□□ -0.46
HPS4-202ENST00000398145 PCDHA12Q9UN75 941 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 H7C1W4 665 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 PRPF3O43395 683 aaKnown RBP12.16□□□□□ -0.46
HPS4-202ENST00000398145 SRGAP2O75044 1071 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 KIF11P52732 1056 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 CRB1P82279 1406 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 E2F5Q15329 346 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 RNF10Q8N5U6 811 aaKnown RBP12.16□□□□□ -0.46
HPS4-202ENST00000398145 COG1Q8WTW3 980 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 MCUR1Q96AQ8 359 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 ACTR5Q9H9F9 607 aaPredicted RBP12.16□□□□□ -0.46
HPS4-202ENST00000398145 TFCP2L1Q9NZI6 479 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 SERPINA10Q9UK55 444 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 BZW2Q9Y6E2 419 aaKnown RBP12.16□□□□□ -0.46
HPS4-202ENST00000398145 PARP3Q9Y6F1 533 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 KDM3AQ9Y4C1 1321 aa12.16□□□□□ -0.46
HPS4-202ENST00000398145 EXOC3O60645 756 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 ZNF131P52739 623 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 FKBP3Q00688 224 aaKnown RBP12.15□□□□□ -0.46
HPS4-202ENST00000398145 ADAM9Q13443 819 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 PRDM4Q9UKN5 801 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 PCDHA13Q9Y5I0 950 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 STK36Q9NRP7 1315 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 KRT15P19012 456 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 CASP1P29466 404 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 GYG1P46976 350 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 USP14P54578 494 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 GPBP1Q86WP2 473 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 TBC1D31Q96DN5 1066 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 VCXQ9H320 206 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 LGALS16A8MUM7 142 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 HMGB1P1B2RPK0 211 aaPredicted RBP12.15□□□□□ -0.46
HPS4-202ENST00000398145 PRKAB2O43741 272 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 SF3B2Q13435 895 aaKnown RBP12.15□□□□□ -0.46
HPS4-202ENST00000398145 HHATQ5VTY9 493 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 ARL6IP4Q66PJ3 421 aaKnown RBP12.15□□□□□ -0.46
HPS4-202ENST00000398145 METTL16Q86W50 562 aaKnown RBP12.15□□□□□ -0.46
HPS4-202ENST00000398145 TCP11Q8WWU5 503 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 GDAQ9Y2T3 454 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 STK24Q9Y6E0 443 aa12.15□□□□□ -0.46
HPS4-202ENST00000398145 PGRMC1O00264 195 aaKnown RBP12.15□□□□□ -0.47
HPS4-202ENST00000398145 CTNND1O60716 968 aaKnown RBP12.15□□□□□ -0.47
HPS4-202ENST00000398145 H2AFXP16104 143 aaPredicted RBP12.15□□□□□ -0.47
HPS4-202ENST00000398145 ARHGAP44Q17R89 818 aa12.15□□□□□ -0.47
HPS4-202ENST00000398145 ENGASEQ8NFI3 743 aa12.15□□□□□ -0.47
HPS4-202ENST00000398145 RASGRP4Q8TDF6 673 aa12.15□□□□□ -0.47
HPS4-202ENST00000398145 STRBPQ96SI9 672 aaKnown RBP12.15□□□□□ -0.47
HPS4-202ENST00000398145 FAM114A2Q9NRY5 505 aa12.15□□□□□ -0.47
HPS4-202ENST00000398145 E9PCH4 1651 aa12.15□□□□□ -0.47
HPS4-202ENST00000398145 AK9Q5TCS8 1911 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 KIF28PB7ZC32 967 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 TRIM66O15016 1216 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 FOXN1O15353 648 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 FTCDO95954 541 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 NAA35Q5VZE5 725 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 RBM43Q6ZSC3 357 aaKnown RBP12.14□□□□□ -0.47
HPS4-202ENST00000398145 ADAT2Q7Z6V5 191 aaKnown RBP12.14□□□□□ -0.47
HPS4-202ENST00000398145 RPAINQ86UA6 219 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 SPATA24Q86W54 205 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 MAPKAPK5Q8IW41 473 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 PAF1Q8N7H5 531 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 UHMK1Q8TAS1 419 aaKnown RBP12.14□□□□□ -0.47
HPS4-202ENST00000398145 UIMC1Q96RL1 719 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 FERMT1Q9BQL6 677 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 PANK4Q9NVE7 773 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 TUBE1Q9UJT0 475 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 NFU1Q9UMS0 254 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 PCDHA4Q9UN74 947 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 CHUKO15111 745 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 IFNAR2P48551 515 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 MYCT1Q8N699 235 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 SREK1Q8WXA9 508 aaKnown RBP12.14□□□□□ -0.47
HPS4-202ENST00000398145 MRRFQ96E11 262 aaKnown RBP12.14□□□□□ -0.47
HPS4-202ENST00000398145 METTL14Q9HCE5 456 aaKnown RBP12.14□□□□□ -0.47
HPS4-202ENST00000398145 RIC8AQ9NPQ8 531 aa12.14□□□□□ -0.47
HPS4-202ENST00000398145 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.14□□□□□ -0.47
HPS4-202ENST00000398145 RPSAP08865 295 aaKnown RBP12.14□□□□□ -0.47
HPS4-202ENST00000398145 PRR29P0C7W0 189 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms