RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 AMNQ9BXJ7 453 aa34.08■■■■□ 3.05
CHCHD4-202ENST00000396914 SEC63Q9UGP8 760 aaKnown RBP34.08■■■■□ 3.05
CHCHD4-202ENST00000396914 COBLO75128 1261 aa34.07■■■■□ 3.04
CHCHD4-202ENST00000396914 RCAN1P53805 252 aa34.07■■■■□ 3.04
CHCHD4-202ENST00000396914 NPLOC4Q8TAT6 608 aa34.07■■■■□ 3.04
CHCHD4-202ENST00000396914 MYH6P13533 1939 aa34.07■■■■□ 3.04
CHCHD4-202ENST00000396914 CCL14Q16627 93 aa34.06■■■■□ 3.04
CHCHD4-202ENST00000396914 MTMR8Q96EF0 704 aa34.06■■■■□ 3.04
CHCHD4-202ENST00000396914 IL17RAQ96F46 866 aa34.06■■■■□ 3.04
CHCHD4-202ENST00000396914 ABCB11O95342 1321 aa34.06■■■■□ 3.04
CHCHD4-202ENST00000396914 PNMA6FA0A0J9YX94 578 aa34.05■■■■□ 3.04
CHCHD4-202ENST00000396914 CCDC196A0A1B0GTZ2 297 aa34.05■■■■□ 3.04
CHCHD4-202ENST00000396914 SMARCA1P28370 1054 aa34.05■■■■□ 3.04
CHCHD4-202ENST00000396914 TRMT44Q8IYL2 757 aaKnown RBP34.05■■■■□ 3.04
CHCHD4-202ENST00000396914 BACH2Q9BYV9 841 aa34.05■■■■□ 3.04
CHCHD4-202ENST00000396914 ZNF236Q9UL36 1845 aa34.05■■■■□ 3.04
CHCHD4-202ENST00000396914 PPP2R5BQ15173 497 aa34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 ANKRD1Q15327 319 aa34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 NOL8Q76FK4 1167 aaKnown RBP34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 TRIB2Q92519 343 aa34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 A1CFQ9NQ94 594 aaKnown RBP34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 PCDHA1Q9Y5I3 950 aa34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 BAZ2BQ9UIF8 2168 aaKnown RBP34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 ZNFX1Q9P2E3 1918 aaKnown RBP34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 PTPDC1A2A3K4 754 aa34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 NFIBO00712 420 aa34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 HOXC6P09630 235 aa34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 PDIA3P30101 505 aaKnown RBP34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 CDC27P30260 824 aa34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 RBM25P49756 843 aaKnown RBP34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 AK2P54819 239 aa34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 UBXN2AP68543 259 aa34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 CCT2P78371 535 aaKnown RBP34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 STK3Q13188 491 aa34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 MRPL11Q9Y3B7 192 aaKnown RBP34.04■■■■□ 3.04
CHCHD4-202ENST00000396914 PFASO15067 1338 aa34.03■■■■□ 3.04
CHCHD4-202ENST00000396914 HMGCRP04035 888 aa34.03■■■■□ 3.04
CHCHD4-202ENST00000396914 INHAP05111 366 aa34.03■■■■□ 3.04
CHCHD4-202ENST00000396914 ADD1P35611 737 aaKnown RBP34.03■■■■□ 3.04
CHCHD4-202ENST00000396914 TRAF1Q13077 416 aa34.03■■■■□ 3.04
CHCHD4-202ENST00000396914 SMCHD1A6NHR9 2005 aa34.02■■■■□ 3.04
CHCHD4-202ENST00000396914 HTTP42858 3142 aa34.02■■■■□ 3.04
CHCHD4-202ENST00000396914 hCG_1642624A0A1W2PR95 340 aa34.02■■■■□ 3.04
CHCHD4-202ENST00000396914 CCDC85CA6NKD9 419 aa34.02■■■■□ 3.04
CHCHD4-202ENST00000396914 POTEB2H3BUK9 544 aa34.02■■■■□ 3.04
CHCHD4-202ENST00000396914 PPP1R11O60927 126 aaPredicted RBP34.02■■■■□ 3.04
CHCHD4-202ENST00000396914 EVCP57679 992 aa34.02■■■■□ 3.04
CHCHD4-202ENST00000396914 CLEC4DQ8WXI8 215 aa34.02■■■■□ 3.04
CHCHD4-202ENST00000396914 MFSD14CQ5VZR4 134 aa34.01■■■■□ 3.03
CHCHD4-202ENST00000396914 DHX30Q7L2E3 1194 aaKnown RBP eCLIP34.01■■■■□ 3.03
CHCHD4-202ENST00000396914 ARMC5Q96C12 935 aa34.01■■■■□ 3.03
CHCHD4-202ENST00000396914 ZNF274Q96GC6 653 aaPredicted RBP34.01■■■■□ 3.03
CHCHD4-202ENST00000396914 ALDH8A1Q9H2A2 487 aaPredicted RBP34.01■■■■□ 3.03
CHCHD4-202ENST00000396914 FLRT1Q9NZU1 646 aa34.01■■■■□ 3.03
CHCHD4-202ENST00000396914 BAATQ14032 418 aaPredicted RBP34■■■■□ 3.03
CHCHD4-202ENST00000396914 ZNF792Q3KQV3 632 aa34■■■■□ 3.03
CHCHD4-202ENST00000396914 RNF207Q6ZRF8 634 aa34■■■■□ 3.03
CHCHD4-202ENST00000396914 MAML3Q96JK9 1138 aa34■■■■□ 3.03
CHCHD4-202ENST00000396914 ZNF333Q96JL9 665 aa34■■■■□ 3.03
CHCHD4-202ENST00000396914 NCOA5Q9HCD5 579 aaKnown RBP34■■■■□ 3.03
CHCHD4-202ENST00000396914 FAM217BQ9NTX9 383 aaPredicted RBP34■■■■□ 3.03
CHCHD4-202ENST00000396914 CYP39A1Q9NYL5 469 aa34■■■■□ 3.03
CHCHD4-202ENST00000396914 CALML3P27482 149 aa33.99■■■■□ 3.03
CHCHD4-202ENST00000396914 CNTNAP5Q8WYK1 1306 aa33.98■■■■□ 3.03
CHCHD4-202ENST00000396914 TRIM32Q13049 653 aa33.98■■■■□ 3.03
CHCHD4-202ENST00000396914 MCF2L2Q86YR7 1114 aa33.98■■■■□ 3.03
CHCHD4-202ENST00000396914 DIS3Q9Y2L1 958 aaKnown RBP33.98■■■■□ 3.03
CHCHD4-202ENST00000396914 V9GY48 417 aaPredicted RBP33.98■■■■□ 3.03
CHCHD4-202ENST00000396914 DNAJC25-GNG10A0A024R161 153 aa33.97■■■■□ 3.03
CHCHD4-202ENST00000396914 CNTN2Q02246 1040 aa33.97■■■■□ 3.03
CHCHD4-202ENST00000396914 KIF2CQ99661 725 aa33.97■■■■□ 3.03
CHCHD4-202ENST00000396914 TPCN1Q9ULQ1 816 aa33.97■■■■□ 3.03
CHCHD4-202ENST00000396914 PLXNA1Q9UIW2 1896 aa33.97■■■■□ 3.03
CHCHD4-202ENST00000396914 CPLX1O14810 134 aa33.96■■■■□ 3.03
CHCHD4-202ENST00000396914 CYP2C19P33261 490 aa33.96■■■■□ 3.03
CHCHD4-202ENST00000396914 OLFML2BQ68BL8 750 aa33.96■■■■□ 3.03
CHCHD4-202ENST00000396914 SLC30A10Q6XR72 485 aa33.96■■■■□ 3.03
CHCHD4-202ENST00000396914 SLKQ9H2G2 1235 aaPredicted RBP33.96■■■■□ 3.03
CHCHD4-202ENST00000396914 NID2Q14112 1375 aa33.96■■■■□ 3.03
CHCHD4-202ENST00000396914 PRKAR2AP13861 404 aaKnown RBP33.96■■■■□ 3.03
CHCHD4-202ENST00000396914 HEATR3Q7Z4Q2 680 aa33.96■■■■□ 3.03
CHCHD4-202ENST00000396914 TBC1D32Q96NH3 1257 aa33.96■■■■□ 3.03
CHCHD4-202ENST00000396914 CFBP00751 764 aa33.95■■■■□ 3.02
CHCHD4-202ENST00000396914 RPS6P62753 249 aaKnown RBP33.95■■■■□ 3.02
CHCHD4-202ENST00000396914 AKAP17AQ02040 695 aaKnown RBP33.95■■■■□ 3.02
CHCHD4-202ENST00000396914 MTFR1Q15390 333 aa33.95■■■■□ 3.02
CHCHD4-202ENST00000396914 TMEM106CQ9BVX2 250 aa33.95■■■■□ 3.02
CHCHD4-202ENST00000396914 PPFIA3O75145 1194 aa33.94■■■■□ 3.02
CHCHD4-202ENST00000396914 FAM133AQ8N9E0 248 aa33.94■■■■□ 3.02
CHCHD4-202ENST00000396914 TBC1D5Q92609 795 aa33.94■■■■□ 3.02
CHCHD4-202ENST00000396914 PURBQ96QR8 312 aaKnown RBP33.94■■■■□ 3.02
CHCHD4-202ENST00000396914 RNF208Q9H0X6 261 aa33.94■■■■□ 3.02
CHCHD4-202ENST00000396914 CCL5P13501 91 aa33.93■■■■□ 3.02
CHCHD4-202ENST00000396914 CACNB2Q08289 660 aaPredicted RBP33.93■■■■□ 3.02
CHCHD4-202ENST00000396914 FUT2Q10981 343 aa33.93■■■■□ 3.02
CHCHD4-202ENST00000396914 RABEP1Q15276 862 aa33.93■■■■□ 3.02
CHCHD4-202ENST00000396914 CPLX2Q6PUV4 134 aaKnown RBP33.93■■■■□ 3.02
CHCHD4-202ENST00000396914 RGS22Q8NE09 1264 aa33.93■■■■□ 3.02
CHCHD4-202ENST00000396914 PHKBQ93100 1093 aa33.93■■■■□ 3.02
CHCHD4-202ENST00000396914 TINF2Q9BSI4 451 aa33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms