RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 ARHGAP29Q52LW3 1261 aa13.34□□□□□ -0.27
ATN1-202ENST00000396684 ANO3Q9BYT9 981 aa13.34□□□□□ -0.27
ATN1-202ENST00000396684 NRAPQ86VF7 1730 aa13.34□□□□□ -0.27
ATN1-202ENST00000396684 MYH14Q7Z406 1995 aaKnown RBP13.34□□□□□ -0.27
ATN1-202ENST00000396684 NDUFB10O96000 172 aa13.34□□□□□ -0.27
ATN1-202ENST00000396684 TRIM21P19474 475 aaKnown RBP13.34□□□□□ -0.27
ATN1-202ENST00000396684 IRX3P78415 501 aaPredicted RBP13.34□□□□□ -0.27
ATN1-202ENST00000396684 CXCL9Q07325 125 aa13.34□□□□□ -0.27
ATN1-202ENST00000396684 APOBEC3FQ8IUX4 373 aaKnown RBP13.34□□□□□ -0.27
ATN1-202ENST00000396684 C16orf45Q96MC5 204 aaPredicted RBP13.34□□□□□ -0.27
ATN1-202ENST00000396684 CEP89Q96ST8 783 aa13.34□□□□□ -0.27
ATN1-202ENST00000396684 MAGEF1Q9HAY2 307 aa13.34□□□□□ -0.27
ATN1-202ENST00000396684 DDTLA6NHG4 134 aaPredicted RBP13.34□□□□□ -0.27
ATN1-202ENST00000396684 PPP4R3AQ6IN85 833 aa13.34□□□□□ -0.27
ATN1-202ENST00000396684 TJP1Q07157 1748 aa13.34□□□□□ -0.27
ATN1-202ENST00000396684 KLRG2A4D1S0 409 aaPredicted RBP13.33□□□□□ -0.27
ATN1-202ENST00000396684 GMPSP49915 693 aaPredicted RBP13.33□□□□□ -0.27
ATN1-202ENST00000396684 TMEM39BQ9GZU3 492 aa13.33□□□□□ -0.27
ATN1-202ENST00000396684 TMEM260Q9NX78 707 aa13.33□□□□□ -0.27
ATN1-202ENST00000396684 BAZ2BQ9UIF8 2168 aaKnown RBP13.33□□□□□ -0.28
ATN1-202ENST00000396684 DDX39AO00148 427 aaKnown RBP13.33□□□□□ -0.28
ATN1-202ENST00000396684 STXBP3O00186 592 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 RPN1P04843 607 aaKnown RBP13.33□□□□□ -0.28
ATN1-202ENST00000396684 CLCN1P35523 988 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 ATP2C1P98194 919 aaPredicted RBP13.33□□□□□ -0.28
ATN1-202ENST00000396684 AP3B2Q13367 1082 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 HERC4Q5GLZ8 1057 aaPredicted RBP13.33□□□□□ -0.28
ATN1-202ENST00000396684 CSGALNACT2Q8N6G5 542 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 NELFBQ8WX92 580 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 VPS33BQ9H267 617 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 RNF181Q9P0P0 153 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 FBXO2Q9UK22 296 aaPredicted RBP13.33□□□□□ -0.28
ATN1-202ENST00000396684 PCDHA6Q9UN73 950 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 PCDHA8Q9Y5H6 950 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 USP17L15C9J2P7 530 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 USP17L13C9JLJ4 530 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 USP17L11C9JVI0 530 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 USP17L18D6R9N7 530 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 USP17L22D6RA61 530 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 USP17L17D6RBQ6 530 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 USP17L19D6RCP7 530 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 USP17L20D6RJB6 530 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 USP17L24Q0WX57 530 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 NOLC1Q14978 699 aaKnown RBP eCLIP13.33□□□□□ -0.28
ATN1-202ENST00000396684 USP17L6PQ6QN14 398 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 PLA2G4DQ86XP0 818 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 WRNIP1Q96S55 665 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 MRIQ9BWK5 157 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 IDI2Q9BXS1 227 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 XPO4Q9C0E2 1151 aaKnown RBP13.33□□□□□ -0.28
ATN1-202ENST00000396684 SP4Q02446 784 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 ZNF384Q8TF68 577 aa13.33□□□□□ -0.28
ATN1-202ENST00000396684 MATR3P43243 847 aaKnown RBP eCLIP13.32□□□□□ -0.28
ATN1-202ENST00000396684 SLC51AQ86UW1 340 aa13.32□□□□□ -0.28
ATN1-202ENST00000396684 HOXA13P31271 388 aaPredicted RBP13.32□□□□□ -0.28
ATN1-202ENST00000396684 EVX2Q03828 476 aa13.32□□□□□ -0.28
ATN1-202ENST00000396684 UBXN1Q04323 297 aa13.32□□□□□ -0.28
ATN1-202ENST00000396684 TXLNBQ8N3L3 684 aa13.32□□□□□ -0.28
ATN1-202ENST00000396684 ANKS1AQ92625 1134 aa13.32□□□□□ -0.28
ATN1-202ENST00000396684 FANCLQ9NW38 375 aa13.32□□□□□ -0.28
ATN1-202ENST00000396684 MAN1B1Q9UKM7 699 aa13.32□□□□□ -0.28
ATN1-202ENST00000396684 TNNT1P13805 278 aa13.32□□□□□ -0.28
ATN1-202ENST00000396684 SHMT1P34896 483 aa13.32□□□□□ -0.28
ATN1-202ENST00000396684 RAD51AP2Q09MP3 1159 aa13.32□□□□□ -0.28
ATN1-202ENST00000396684 NBPF11Q86T75 865 aa13.32□□□□□ -0.28
ATN1-202ENST00000396684 KIAA1328Q86T90 577 aa13.32□□□□□ -0.28
ATN1-202ENST00000396684 DISC1Q9NRI5 854 aa13.32□□□□□ -0.28
ATN1-202ENST00000396684 BACH1O14867 736 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 ORC2Q13416 577 aaPredicted RBP13.31□□□□□ -0.28
ATN1-202ENST00000396684 PKN1Q16512 942 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 PAGE5Q96GU1 130 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 ZMYND12Q9H0C1 365 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 VPS16Q9H269 839 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 FEM1BQ9UK73 627 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 ARHGEF35A5YM69 484 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 FGRP09769 529 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 SYCP1Q15431 976 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 HS2ST1Q7LGA3 356 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 KRT26Q7Z3Y9 468 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 MRFAP1L1Q96HT8 127 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 TRAF5O00463 557 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 IKBKBO14920 756 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 UBXN2AP68543 259 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 ARHGEF16Q5VV41 709 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 SAMD7Q7Z3H4 446 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 TPH2Q8IWU9 490 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 LARP4BQ92615 738 aaKnown RBP13.31□□□□□ -0.28
ATN1-202ENST00000396684 JMJD4Q9H9V9 463 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 RIC8AQ9NPQ8 531 aa13.31□□□□□ -0.28
ATN1-202ENST00000396684 ERCC5P28715 1186 aaPredicted RBP13.3□□□□□ -0.28
ATN1-202ENST00000396684 SPA17Q15506 151 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 AXDND1Q5T1B0 1012 aaPredicted RBP13.3□□□□□ -0.28
ATN1-202ENST00000396684 CCDC70Q6NSX1 233 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 KIF18AQ8NI77 898 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 IMPACTQ9P2X3 320 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 STK17AQ9UEE5 414 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 CD2APQ9Y5K6 639 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 COL1A1P02452 1464 aaPredicted RBP13.3□□□□□ -0.28
ATN1-202ENST00000396684 MYL1P05976 194 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 PLCG1P19174 1290 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms