RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 PPM1FP49593 454 aaPredicted RBP18.84■□□□□ 0.61
SIN3A-203ENST00000394949 EIF3BP55884 814 aaKnown RBP18.84■□□□□ 0.61
SIN3A-203ENST00000394949 SNX16P57768 344 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 NEK8Q86SG6 692 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 PGRMC1O00264 195 aaKnown RBP18.84■□□□□ 0.61
SIN3A-203ENST00000394949 CHUKO15111 745 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 DBNLQ9UJU6 430 aaKnown RBP18.84■□□□□ 0.61
SIN3A-203ENST00000394949 ABCB4P21439 1286 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 CCDC89Q8N998 374 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 PBKQ96KB5 322 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 AK8Q96MA6 479 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 GJA3Q9Y6H8 435 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 NEO1Q92859 1461 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 EIF3CLB5ME19 914 aaKnown RBP18.84■□□□□ 0.61
SIN3A-203ENST00000394949 ALDH1B1P30837 517 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 RAD51AP2Q09MP3 1159 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 ARHGAP44Q17R89 818 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 GLE1Q53GS7 698 aaKnown RBP18.84■□□□□ 0.61
SIN3A-203ENST00000394949 RASIP1Q5U651 963 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 DPH6Q7L8W6 267 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 KIFC2Q96AC6 838 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 EIF3CQ99613 913 aaKnown RBP18.84■□□□□ 0.61
SIN3A-203ENST00000394949 PRDM15P57071 1507 aaPredicted RBP18.83■□□□□ 0.61
SIN3A-203ENST00000394949 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.61
SIN3A-203ENST00000394949 BRDTQ58F21 947 aaPredicted RBP18.83■□□□□ 0.61
SIN3A-203ENST00000394949 FAM26FQ5R3K3 315 aa18.83■□□□□ 0.61
SIN3A-203ENST00000394949 ZNF589Q86UQ0 364 aaPredicted RBP18.83■□□□□ 0.61
SIN3A-203ENST00000394949 GPBP1Q86WP2 473 aa18.83■□□□□ 0.61
SIN3A-203ENST00000394949 LRRC8CQ8TDW0 803 aa18.83■□□□□ 0.61
SIN3A-203ENST00000394949 TCP11Q8WWU5 503 aa18.83■□□□□ 0.61
SIN3A-203ENST00000394949 P2RX5Q93086 422 aa18.83■□□□□ 0.61
SIN3A-203ENST00000394949 CTSWP56202 376 aa18.83■□□□□ 0.61
SIN3A-203ENST00000394949 HSP90AA5PQ58FG0 334 aa18.83■□□□□ 0.61
SIN3A-203ENST00000394949 KLHL29Q96CT2 875 aa18.83■□□□□ 0.61
SIN3A-203ENST00000394949 PCDHB13Q9Y5F0 798 aa18.83■□□□□ 0.61
SIN3A-203ENST00000394949 CPSF1Q10570 1443 aaKnown RBP18.83■□□□□ 0.6
SIN3A-203ENST00000394949 MFAP3LO75121 409 aa18.83■□□□□ 0.6
SIN3A-203ENST00000394949 SMIM24O75264 130 aa18.83■□□□□ 0.6
SIN3A-203ENST00000394949 HSPA6P17066 643 aa18.83■□□□□ 0.6
SIN3A-203ENST00000394949 MAN2A1Q16706 1144 aa18.83■□□□□ 0.6
SIN3A-203ENST00000394949 ANKRD13CQ8N6S4 541 aa18.83■□□□□ 0.6
SIN3A-203ENST00000394949 FTOQ9C0B1 505 aaKnown RBP eCLIP18.83■□□□□ 0.6
SIN3A-203ENST00000394949 THAP9Q9H5L6 903 aa18.83■□□□□ 0.6
SIN3A-203ENST00000394949 PKD2L1Q9P0L9 805 aa18.83■□□□□ 0.6
SIN3A-203ENST00000394949 ABCC12Q96J65 1359 aa18.83■□□□□ 0.6
SIN3A-203ENST00000394949 CTNND1O60716 968 aaKnown RBP18.83■□□□□ 0.6
SIN3A-203ENST00000394949 ZMYND10O75800 440 aa18.83■□□□□ 0.6
SIN3A-203ENST00000394949 RABGAP1Q9Y3P9 1069 aa18.83■□□□□ 0.6
SIN3A-203ENST00000394949 GUCY2CP25092 1073 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 E2F5Q15329 346 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 ARHGEF25Q86VW2 580 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 SAMSN1Q9NSI8 373 aaKnown RBP18.82■□□□□ 0.6
SIN3A-203ENST00000394949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.82■□□□□ 0.69e-7■■■□□ 15.9
SIN3A-203ENST00000394949 DAAM1Q9Y4D1 1078 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 CHMP2AO43633 222 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 CIAO1O76071 339 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 C10orf76Q5T2E6 689 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 USTQ9Y2C2 406 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 MAGI3Q5TCQ9 1506 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 ABCA5Q8WWZ7 1642 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 LMNB1P20700 586 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 C2orf54Q08AI8 447 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 E2F4Q16254 413 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 NBPF9Q3BBW0 867 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 MAPKAPK5Q8IW41 473 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 VCX3AQ9NNX9 186 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 PANK4Q9NVE7 773 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 KCNG1Q9UIX4 513 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 SRPRBQ9Y5M8 271 aaKnown RBP18.82■□□□□ 0.6
SIN3A-203ENST00000394949 RPSAP08865 295 aaKnown RBP18.82■□□□□ 0.6
SIN3A-203ENST00000394949 ATF2P15336 505 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 MBD5Q9P267 1494 aa18.82■□□□□ 0.6
SIN3A-203ENST00000394949 ATP1A3P13637 1013 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 LTKP29376 864 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 POLA2Q14181 598 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 ARID5BQ14865 1188 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 PALM2Q8IXS6 379 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 GBP7Q8N8V2 638 aaPredicted RBP18.81■□□□□ 0.6
SIN3A-203ENST00000394949 PI4K2BQ8TCG2 481 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 OPHN1O60890 802 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 PCCAP05165 728 aaPredicted RBP18.81■□□□□ 0.6
SIN3A-203ENST00000394949 TECP42680 631 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 GRM1Q13255 1194 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 N4BP2L2Q92802 583 aaPredicted RBP18.81■□□□□ 0.6
SIN3A-203ENST00000394949 ADAM9Q13443 819 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 CUL1Q13616 776 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 CFAP61Q8NHU2 1237 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 SLC39A2Q9NP94 309 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 TXLNGQ9NUQ3 528 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 A0A087WWV3 80 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 ZBED4O75132 1171 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 MMP1P03956 469 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 KCNJ6P48051 423 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 STRN3Q13033 797 aa18.81■□□□□ 0.6
SIN3A-203ENST00000394949 ANO9A1A5B4 782 aa18.8■□□□□ 0.6
SIN3A-203ENST00000394949 ARHGEF18Q6ZSZ5 1173 aa18.8■□□□□ 0.6
SIN3A-203ENST00000394949 ZBTB38Q8NAP3 1195 aaPredicted RBP18.8■□□□□ 0.6
SIN3A-203ENST00000394949 CYP2E1P05181 493 aaPredicted RBP18.8■□□□□ 0.6
SIN3A-203ENST00000394949 IFNAR1P17181 557 aa18.8■□□□□ 0.6
SIN3A-203ENST00000394949 EXOC3L4Q17RC7 722 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms