RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 TYW1BQ6NUM6 668 aa21.43■■□□□ 1.02
CCDC50-202ENST00000392456 BRAPQ7Z569 592 aa21.43■■□□□ 1.02
CCDC50-202ENST00000392456 DPF2Q92785 391 aa21.43■■□□□ 1.02
CCDC50-202ENST00000392456 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.43■■□□□ 1.02
CCDC50-202ENST00000392456 RCOR1Q9UKL0 485 aa21.43■■□□□ 1.02
CCDC50-202ENST00000392456 ELP1O95163 1332 aa21.42■■□□□ 1.02
CCDC50-202ENST00000392456 MYO1BO43795 1136 aa21.42■■□□□ 1.02
CCDC50-202ENST00000392456 SCG2P13521 617 aa21.42■■□□□ 1.02
CCDC50-202ENST00000392456 LMNB1P20700 586 aa21.42■■□□□ 1.02
CCDC50-202ENST00000392456 SMC1AQ14683 1233 aaKnown RBP21.42■■□□□ 1.02
CCDC50-202ENST00000392456 PHF20Q9BVI0 1012 aa21.42■■□□□ 1.02
CCDC50-202ENST00000392456 L2HGDHQ9H9P8 463 aa21.42■■□□□ 1.02
CCDC50-202ENST00000392456 VAT1LQ9HCJ6 419 aa21.42■■□□□ 1.02
CCDC50-202ENST00000392456 ARGLU1Q9NWB6 273 aaPredicted RBP21.42■■□□□ 1.02
CCDC50-202ENST00000392456 FAM205CA6NFA0 338 aa21.41■■□□□ 1.02
CCDC50-202ENST00000392456 TPM1P09493 284 aa21.41■■□□□ 1.02
CCDC50-202ENST00000392456 GNL2Q13823 731 aaKnown RBP21.41■■□□□ 1.02
CCDC50-202ENST00000392456 PFKFB3Q16875 520 aaPredicted RBP21.41■■□□□ 1.02
CCDC50-202ENST00000392456 ABCB5Q2M3G0 1257 aa21.41■■□□□ 1.02
CCDC50-202ENST00000392456 EARS2Q5JPH6 523 aaKnown RBP21.41■■□□□ 1.02
CCDC50-202ENST00000392456 FKBP1CQ5VVH2 108 aa21.41■■□□□ 1.02
CCDC50-202ENST00000392456 EFCAB13Q8IY85 973 aa21.41■■□□□ 1.02
CCDC50-202ENST00000392456 GREB1LQ9C091 1923 aaPredicted RBP21.41■■□□□ 1.02
CCDC50-202ENST00000392456 USP27XA6NNY8 438 aa21.41■■□□□ 1.02
CCDC50-202ENST00000392456 RASA3Q14644 834 aa21.41■■□□□ 1.02
CCDC50-202ENST00000392456 ZNF396Q96N95 335 aaPredicted RBP21.41■■□□□ 1.02
CCDC50-202ENST00000392456 TACO1Q9BSH4 297 aaKnown RBP21.41■■□□□ 1.02
CCDC50-202ENST00000392456 ARHGAP29Q52LW3 1261 aa21.4■■□□□ 1.02
CCDC50-202ENST00000392456 FOXR1Q6PIV2 292 aa21.4■■□□□ 1.02
CCDC50-202ENST00000392456 FILIP1Q7Z7B0 1213 aa21.4■■□□□ 1.02
CCDC50-202ENST00000392456 NOSTRINQ8IVI9 506 aa21.4■■□□□ 1.02
CCDC50-202ENST00000392456 CACTINQ8WUQ7 758 aaKnown RBP21.4■■□□□ 1.02
CCDC50-202ENST00000392456 MYH15Q9Y2K3 1946 aa21.4■■□□□ 1.02
CCDC50-202ENST00000392456 COL2A1P02458 1487 aaPredicted RBP21.4■■□□□ 1.02
CCDC50-202ENST00000392456 SNHG28P0DPA3 235 aa21.4■■□□□ 1.02
CCDC50-202ENST00000392456 TTBK2Q6IQ55 1244 aa21.4■■□□□ 1.02
CCDC50-202ENST00000392456 FAM83AQ86UY5 434 aa21.4■■□□□ 1.02
CCDC50-202ENST00000392456 MIEF2Q96C03 454 aa21.4■■□□□ 1.02
CCDC50-202ENST00000392456 GPCPD1Q9NPB8 672 aa21.4■■□□□ 1.02
CCDC50-202ENST00000392456 RTEL1Q9NZ71 1219 aa21.4■■□□□ 1.02
CCDC50-202ENST00000392456 TOB1P50616 345 aaPredicted RBP21.39■■□□□ 1.02
CCDC50-202ENST00000392456 LINC00301Q8NCQ3 95 aa21.39■■□□□ 1.02
CCDC50-202ENST00000392456 MRVI1Q9Y6F6 885 aa21.39■■□□□ 1.02
CCDC50-202ENST00000392456 RAD21O60216 631 aa21.39■■□□□ 1.01
CCDC50-202ENST00000392456 SASH3O75995 380 aa21.39■■□□□ 1.01
CCDC50-202ENST00000392456 GNAQP50148 359 aa21.39■■□□□ 1.01
CCDC50-202ENST00000392456 HOMER1Q86YM7 354 aa21.39■■□□□ 1.01
CCDC50-202ENST00000392456 KANSL2Q9H9L4 492 aa21.39■■□□□ 1.01
CCDC50-202ENST00000392456 HERC5Q9UII4 1024 aaKnown RBP21.39■■□□□ 1.01
CCDC50-202ENST00000392456 ZRSR1Q15695 479 aaKnown RBP21.38■■□□□ 1.01
CCDC50-202ENST00000392456 TTC19Q6DKK2 380 aaPredicted RBP21.38■■□□□ 1.01
CCDC50-202ENST00000392456 TMEM179Q6ZVK1 233 aa21.38■■□□□ 1.01
CCDC50-202ENST00000392456 KCTD1Q719H9 257 aa21.38■■□□□ 1.01
CCDC50-202ENST00000392456 TADA2BQ86TJ2 420 aa21.38■■□□□ 1.01
CCDC50-202ENST00000392456 LRRN4CLQ8ND94 238 aa21.38■■□□□ 1.01
CCDC50-202ENST00000392456 TRPM4Q8TD43 1214 aa21.38■■□□□ 1.01
CCDC50-202ENST00000392456 TEPSINQ96N21 525 aa21.38■■□□□ 1.01
CCDC50-202ENST00000392456 HACL1Q9UJ83 578 aa21.38■■□□□ 1.01
CCDC50-202ENST00000392456 A0A1W2PRG0 241 aa21.38■■□□□ 1.01
CCDC50-202ENST00000392456 TBC1D8O95759 1140 aa21.38■■□□□ 1.01
CCDC50-202ENST00000392456 EPS15P42566 896 aa21.38■■□□□ 1.01
CCDC50-202ENST00000392456 IRX1P78414 480 aaPredicted RBP21.38■■□□□ 1.01
CCDC50-202ENST00000392456 ICA1Q05084 483 aa21.38■■□□□ 1.01
CCDC50-202ENST00000392456 SAFBQ15424 915 aaKnown RBP eCLIP21.38■■□□□ 1.01
CCDC50-202ENST00000392456 KIF4BQ2VIQ3 1234 aa21.38■■□□□ 1.01
CCDC50-202ENST00000392456 WWC2Q6AWC2 1192 aa21.38■■□□□ 1.01
CCDC50-202ENST00000392456 FAM210AQ96ND0 272 aa21.38■■□□□ 1.01
CCDC50-202ENST00000392456 SLC16A2P36021 539 aa21.37■■□□□ 1.01
CCDC50-202ENST00000392456 SF3A1Q15459 793 aaKnown RBP21.37■■□□□ 1.01
CCDC50-202ENST00000392456 NAIF1Q69YI7 327 aaPredicted RBP21.37■■□□□ 1.01
CCDC50-202ENST00000392456 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.37■■□□□ 1.01
CCDC50-202ENST00000392456 PIGSQ96S52 555 aa21.37■■□□□ 1.01
CCDC50-202ENST00000392456 FOXP1Q9H334 677 aaPredicted RBP21.37■■□□□ 1.01
CCDC50-202ENST00000392456 DDNO94850 711 aaPredicted RBP21.37■■□□□ 1.01
CCDC50-202ENST00000392456 MNAT1P51948 309 aa21.37■■□□□ 1.01
CCDC50-202ENST00000392456 ZNF543Q08ER8 600 aa21.37■■□□□ 1.01
CCDC50-202ENST00000392456 PRAMEF18Q5VWM3 479 aa21.37■■□□□ 1.01
CCDC50-202ENST00000392456 ANO1Q5XXA6 986 aa21.37■■□□□ 1.01
CCDC50-202ENST00000392456 ATL3Q6DD88 541 aa21.37■■□□□ 1.01
CCDC50-202ENST00000392456 MKL1Q969V6 931 aa21.37■■□□□ 1.01
CCDC50-202ENST00000392456 SPZ1Q9BXG8 430 aa21.37■■□□□ 1.01
CCDC50-202ENST00000392456 CABP5Q9NP86 173 aa21.37■■□□□ 1.01
CCDC50-202ENST00000392456 POLR3EQ9NVU0 708 aa21.37■■□□□ 1.01
CCDC50-202ENST00000392456 NYAP2Q9P242 653 aa21.37■■□□□ 1.01
CCDC50-202ENST00000392456 SBF1O95248 1867 aa21.37■■□□□ 1.01
CCDC50-202ENST00000392456 CCDC84Q86UT8 332 aaPredicted RBP21.36■■□□□ 1.01
CCDC50-202ENST00000392456 PCDHA7Q9UN72 937 aa21.36■■□□□ 1.01
CCDC50-202ENST00000392456 MYH4Q9Y623 1939 aa21.36■■□□□ 1.01
CCDC50-202ENST00000392456 WNT7AO00755 349 aa21.36■■□□□ 1.01
CCDC50-202ENST00000392456 SEC31AO94979 1220 aaKnown RBP21.36■■□□□ 1.01
CCDC50-202ENST00000392456 XBP1P17861 261 aa21.36■■□□□ 1.01
CCDC50-202ENST00000392456 ECE1P42892 770 aa21.36■■□□□ 1.01
CCDC50-202ENST00000392456 HIRAP54198 1017 aaPredicted RBP21.36■■□□□ 1.01
CCDC50-202ENST00000392456 HEATR3Q7Z4Q2 680 aa21.36■■□□□ 1.01
CCDC50-202ENST00000392456 DRC7Q8IY82 874 aa21.36■■□□□ 1.01
CCDC50-202ENST00000392456 GPRC5DQ9NZD1 345 aa21.36■■□□□ 1.01
CCDC50-202ENST00000392456 RNF181Q9P0P0 153 aa21.36■■□□□ 1.01
CCDC50-202ENST00000392456 A0A087WUV0 522 aaPredicted RBP21.35■■□□□ 1.01
CCDC50-202ENST00000392456 MARCKSP29966 332 aaPredicted RBP21.35■■□□□ 1.01
CCDC50-202ENST00000392456 ME1P48163 572 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms