RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 USP17L21D6R901 530 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 EEF1GP26641 437 aaKnown RBP9.26□□□□□ -0.93
VPS36-201ENST00000378060 FYB2Q5VWT5 728 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 LMNTD2Q8IXW0 634 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 STMN2Q93045 179 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 CLIC6Q96NY7 704 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 PSMB7Q99436 277 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 NLRC4Q9NPP4 1024 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 ATP8A2Q9NTI2 1148 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 ZNF219Q9P2Y4 722 aaPredicted RBP9.26□□□□□ -0.93
VPS36-201ENST00000378060 AMFRQ9UKV5 643 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 ARHGEF35A5YM69 484 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 RPN1P04843 607 aaKnown RBP9.26□□□□□ -0.93
VPS36-201ENST00000378060 STAT1P42224 750 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 GNGT1P63211 74 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 KIF23Q02241 960 aaPredicted RBP9.26□□□□□ -0.93
VPS36-201ENST00000378060 LONRF2Q1L5Z9 754 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 CCDC63Q8NA47 563 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 PI4K2BQ8TCG2 481 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 BCAS4Q8TDM0 211 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 FNBP1Q96RU3 617 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 CAPS2Q9BXY5 557 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 NUP188Q5SRE5 1749 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 VSIG1Q86XK7 387 aa9.26□□□□□ -0.93
VPS36-201ENST00000378060 SMCO2A6NFE2 343 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 E7EVH7 732 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 GAS8O95995 478 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 PTGDRQ13258 359 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 CACNA2D3Q8IZS8 1091 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.25□□□□□ -0.93
VPS36-201ENST00000378060 TBC1D22AQ8WUA7 517 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 EXOC4Q96A65 974 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 CAMKK2Q96RR4 588 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 TRIM31Q9BZY9 425 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 HOMER3Q9NSC5 361 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 ASIC3Q9UHC3 531 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 SAP30BPQ9UHR5 308 aaKnown RBP9.25□□□□□ -0.93
VPS36-201ENST00000378060 C4AP0C0L4 1744 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 COL15A1P39059 1388 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 CACNA1FO60840 1977 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 LAD1O00515 517 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 MYL1P05976 194 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 SLFN14P0C7P3 912 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 HOXA7P31268 230 aaPredicted RBP9.25□□□□□ -0.93
VPS36-201ENST00000378060 DENND2CQ68D51 928 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 ZNF589Q86UQ0 364 aaPredicted RBP9.25□□□□□ -0.93
VPS36-201ENST00000378060 SYNE4Q8N205 404 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 CCDC24Q8N4L8 307 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 UBR3Q6ZT12 1888 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 AFDNP55196 1824 aaKnown RBP9.25□□□□□ -0.93
VPS36-201ENST00000378060 hCG_1642624A0A1W2PR95 340 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 PDE8BO95263 885 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 OR52Z1P0C646 297 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 IFNAR1P17181 557 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 CCDC14Q49A88 953 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 ARHGAP24Q8N264 748 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 PDE11AQ9HCR9 933 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 EXOC3O60645 756 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 XRCC5P13010 732 aaKnown RBP9.25□□□□□ -0.93
VPS36-201ENST00000378060 CASP14P31944 242 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 CTNNA1P35221 906 aaKnown RBP9.25□□□□□ -0.93
VPS36-201ENST00000378060 LRRC24Q50LG9 513 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 PNMA8AQ86V59 439 aaPredicted RBP9.25□□□□□ -0.93
VPS36-201ENST00000378060 VSTM4Q8IW00 320 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 DHTKD1Q96HY7 919 aaPredicted RBP9.25□□□□□ -0.93
VPS36-201ENST00000378060 METTL14Q9HCE5 456 aaKnown RBP9.25□□□□□ -0.93
VPS36-201ENST00000378060 RNF14Q9UBS8 474 aa9.25□□□□□ -0.93
VPS36-201ENST00000378060 ARMCX3Q9UH62 379 aaPredicted RBP9.25□□□□□ -0.93
VPS36-201ENST00000378060 RNF40O75150 1001 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 IGKV5-2P06315 115 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 GBP1P32455 592 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 SLC1A4P43007 532 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 BIRC3Q13489 604 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 CCDC105Q8IYK2 499 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 SLC35F6Q8N357 371 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 SYMPKQ92797 1274 aaKnown RBP9.24□□□□□ -0.93
VPS36-201ENST00000378060 RBM17Q96I25 401 aaKnown RBP9.24□□□□□ -0.93
VPS36-201ENST00000378060 IWS1Q96ST2 819 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.24□□□□□ -0.93
VPS36-201ENST00000378060 KCNG1Q9UIX4 513 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 RREB1Q92766 1687 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 NUP98P52948 1817 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.24□□□□□ -0.93
VPS36-201ENST00000378060 RGS16O15492 202 aaPredicted RBP9.24□□□□□ -0.93
VPS36-201ENST00000378060 FMNL1O95466 1100 aaPredicted RBP9.24□□□□□ -0.93
VPS36-201ENST00000378060 RASSF2P50749 326 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 PLS1Q14651 629 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 TSNAXIP1Q2TAA8 658 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 CEP85LQ5SZL2 805 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 NEK8Q86SG6 692 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 NELFCDQ8IXH7 590 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 CNBD1Q8NA66 436 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 PNMA1Q8ND90 353 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 ARHGEF1Q92888 912 aaKnown RBP9.24□□□□□ -0.93
VPS36-201ENST00000378060 UPF1Q92900 1129 aaKnown RBP eCLIP9.24□□□□□ -0.93
VPS36-201ENST00000378060 TFCP2L1Q9NZI6 479 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 PLSCR1O15162 318 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 CIB2O75838 187 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 UFL1O94874 794 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 H2AFZP0C0S5 128 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 241.2 ms