RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 CALCOCO1Q9P1Z2 691 aa21.73■■□□□ 1.07
PCDH8-202ENST00000377942 C21orf2O43822 256 aa21.73■■□□□ 1.07
PCDH8-202ENST00000377942 ASNSP08243 561 aa21.73■■□□□ 1.07
PCDH8-202ENST00000377942 GBP6Q6ZN66 633 aa21.73■■□□□ 1.07
PCDH8-202ENST00000377942 CERKQ8TCT0 537 aa21.73■■□□□ 1.07
PCDH8-202ENST00000377942 RCOR1Q9UKL0 485 aa21.73■■□□□ 1.07
PCDH8-202ENST00000377942 CYP2E1P05181 493 aaPredicted RBP21.73■■□□□ 1.07
PCDH8-202ENST00000377942 CELF1Q92879 486 aaKnown RBP21.73■■□□□ 1.07
PCDH8-202ENST00000377942 LARP4BQ92615 738 aaKnown RBP21.72■■□□□ 1.07
PCDH8-202ENST00000377942 PLA2G12BQ9BX93 195 aa21.72■■□□□ 1.07
PCDH8-202ENST00000377942 STK17AQ9UEE5 414 aa21.72■■□□□ 1.07
PCDH8-202ENST00000377942 WDR19Q8NEZ3 1342 aa21.72■■□□□ 1.07
PCDH8-202ENST00000377942 NBPF26B4DH59 902 aa21.72■■□□□ 1.07
PCDH8-202ENST00000377942 GAS8O95995 478 aa21.72■■□□□ 1.07
PCDH8-202ENST00000377942 GAP43P17677 238 aa21.72■■□□□ 1.07
PCDH8-202ENST00000377942 NBPF10Q6P3W6 841 aaKnown RBP21.72■■□□□ 1.07
PCDH8-202ENST00000377942 NBPF15Q8N660 670 aa21.72■■□□□ 1.07
PCDH8-202ENST00000377942 POLGP54098 1239 aaPredicted RBP21.72■■□□□ 1.07
PCDH8-202ENST00000377942 RNF34Q969K3 372 aa21.72■■□□□ 1.07
PCDH8-202ENST00000377942 ZNF577Q9BSK1 485 aa21.72■■□□□ 1.07
PCDH8-202ENST00000377942 KIAA1024Q9UPX6 916 aa21.72■■□□□ 1.07
PCDH8-202ENST00000377942 PKP1Q13835 747 aa21.72■■□□□ 1.07
PCDH8-202ENST00000377942 RDH13Q8NBN7 331 aa21.72■■□□□ 1.07
PCDH8-202ENST00000377942 TBCKQ8TEA7 893 aa21.72■■□□□ 1.07
PCDH8-202ENST00000377942 CFAP58Q5T655 872 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 LSM14BQ9BX40 385 aaKnown RBP21.71■■□□□ 1.07
PCDH8-202ENST00000377942 FAM169AQ9Y6X4 670 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 CRKP46108 304 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 EVCP57679 992 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 AOC3Q16853 763 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 EXOC8Q8IYI6 725 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 PNMA6FA0A0J9YX94 578 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 RCAN1P53805 252 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 ALX1Q15699 326 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 ZNF365Q70YC5 407 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 TTC16Q8NEE8 873 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 UBE2Q2Q8WVN8 375 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 FAM204AQ9H8W3 233 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 CPDO75976 1380 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 C8orf74Q6P047 294 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 DPP9Q86TI2 863 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 NLRC4Q9NPP4 1024 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 SH3GLB2Q9NR46 395 aa21.71■■□□□ 1.07
PCDH8-202ENST00000377942 TNNC2P02585 160 aa21.7■■□□□ 1.06
PCDH8-202ENST00000377942 TFDP1Q14186 410 aa21.7■■□□□ 1.06
PCDH8-202ENST00000377942 MAIP1Q8WWC4 291 aa21.7■■□□□ 1.06
PCDH8-202ENST00000377942 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.7■■□□□ 1.06
PCDH8-202ENST00000377942 V9GYY5 206 aaPredicted RBP21.7■■□□□ 1.06
PCDH8-202ENST00000377942 CYP2D7A0A087X1C5 515 aa21.7■■□□□ 1.06
PCDH8-202ENST00000377942 USP17L2Q6R6M4 530 aa21.7■■□□□ 1.06
PCDH8-202ENST00000377942 ABCD1P33897 745 aa21.7■■□□□ 1.06
PCDH8-202ENST00000377942 ADAM9Q13443 819 aa21.7■■□□□ 1.06
PCDH8-202ENST00000377942 ARHGAP44Q17R89 818 aa21.7■■□□□ 1.06
PCDH8-202ENST00000377942 ARMCX5Q6P1M9 558 aa21.7■■□□□ 1.06
PCDH8-202ENST00000377942 MRFAP1L1Q96HT8 127 aa21.7■■□□□ 1.06
PCDH8-202ENST00000377942 KCNQ2O43526 872 aa21.7■■□□□ 1.06
PCDH8-202ENST00000377942 SLC16A2P36021 539 aa21.7■■□□□ 1.06
PCDH8-202ENST00000377942 RABL6Q3YEC7 729 aaPredicted RBP21.7■■□□□ 1.06
PCDH8-202ENST00000377942 LINC00301Q8NCQ3 95 aa21.7■■□□□ 1.06
PCDH8-202ENST00000377942 IPO4Q8TEX9 1081 aaKnown RBP21.7■■□□□ 1.06
PCDH8-202ENST00000377942 CYP4A11Q02928 519 aa21.69■■□□□ 1.06
PCDH8-202ENST00000377942 SP8Q8IXZ3 490 aa21.69■■□□□ 1.06
PCDH8-202ENST00000377942 DCAF4Q8WV16 495 aa21.69■■□□□ 1.06
PCDH8-202ENST00000377942 SLF1Q9BQI6 1058 aa21.69■■□□□ 1.06
PCDH8-202ENST00000377942 FAM47CQ5HY64 1035 aa21.69■■□□□ 1.06
PCDH8-202ENST00000377942 IFIH1Q9BYX4 1025 aaKnown RBP21.69■■□□□ 1.06
PCDH8-202ENST00000377942 PCDHA5Q9Y5H7 936 aa21.69■■□□□ 1.06
PCDH8-202ENST00000377942 STK10O94804 968 aaKnown RBP21.69■■□□□ 1.06
PCDH8-202ENST00000377942 RPS6KA1Q15418 735 aa21.69■■□□□ 1.06
PCDH8-202ENST00000377942 CCDC25Q86WR0 208 aa21.69■■□□□ 1.06
PCDH8-202ENST00000377942 DHTKD1Q96HY7 919 aaPredicted RBP21.69■■□□□ 1.06
PCDH8-202ENST00000377942 NACC1Q96RE7 527 aa21.69■■□□□ 1.06
PCDH8-202ENST00000377942 SUGCTQ9HAC7 445 aa21.69■■□□□ 1.06
PCDH8-202ENST00000377942 SLC39A2Q9NP94 309 aa21.69■■□□□ 1.06
PCDH8-202ENST00000377942 NDC80O14777 642 aa21.69■■□□□ 1.06
PCDH8-202ENST00000377942 GTF2F1P35269 517 aaKnown RBP eCLIP21.69■■□□□ 1.06
PCDH8-202ENST00000377942 C6orf163Q5TEZ5 329 aa21.69■■□□□ 1.06
PCDH8-202ENST00000377942 PRDX5P30044 214 aa21.68■■□□□ 1.06
PCDH8-202ENST00000377942 FOXO4P98177 505 aa21.68■■□□□ 1.06
PCDH8-202ENST00000377942 ODR4Q5SWX8 454 aa21.68■■□□□ 1.06
PCDH8-202ENST00000377942 C1orf112Q9NSG2 853 aa21.68■■□□□ 1.06
PCDH8-202ENST00000377942 ATF7P17544 494 aaPredicted RBP21.68■■□□□ 1.06
PCDH8-202ENST00000377942 ERCC3P19447 782 aa21.68■■□□□ 1.06
PCDH8-202ENST00000377942 SH3RF3Q8TEJ3 882 aaPredicted RBP21.68■■□□□ 1.06
PCDH8-202ENST00000377942 SETD1BQ9UPS6 1966 aaKnown RBP21.68■■□□□ 1.06
PCDH8-202ENST00000377942 PIK3C2BO00750 1634 aa21.68■■□□□ 1.06
PCDH8-202ENST00000377942 DAPK3O43293 454 aa21.68■■□□□ 1.06
PCDH8-202ENST00000377942 HDXQ7Z353 690 aa21.68■■□□□ 1.06
PCDH8-202ENST00000377942 SYNE4Q8N205 404 aa21.68■■□□□ 1.06
PCDH8-202ENST00000377942 RASGRP4Q8TDF6 673 aa21.68■■□□□ 1.06
PCDH8-202ENST00000377942 SPATA31A1Q5TZJ5 1347 aa21.68■■□□□ 1.06
PCDH8-202ENST00000377942 NFIXQ14938 502 aa21.68■■□□□ 1.06
PCDH8-202ENST00000377942 UTP14CQ5TAP6 766 aaKnown RBP21.68■■□□□ 1.06
PCDH8-202ENST00000377942 GPR101Q96P66 508 aaPredicted RBP21.68■■□□□ 1.06
PCDH8-202ENST00000377942 SLFN14P0C7P3 912 aa21.67■■□□□ 1.06
PCDH8-202ENST00000377942 CCND2P30279 289 aa21.67■■□□□ 1.06
PCDH8-202ENST00000377942 YARSP54577 528 aaKnown RBP21.67■■□□□ 1.06
PCDH8-202ENST00000377942 TYW1BQ6NUM6 668 aa21.67■■□□□ 1.06
PCDH8-202ENST00000377942 PEX26Q7Z412 305 aa21.67■■□□□ 1.06
PCDH8-202ENST00000377942 PAIP2Q9BPZ3 127 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms