RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 ZNF473Q8WTR7 871 aaKnown RBP9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 SH3GL3Q99963 347 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 PRM3Q9NNZ6 103 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 BATF3Q9NR55 127 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 SERPINA10Q9UK55 444 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 SALL3Q9BXA9 1300 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 ABCA8O94911 1581 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 LRRIQ3A6PVS8 624 aaPredicted RBP9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 KIF28PB7ZC32 967 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 PGRMC1O00264 195 aaKnown RBP9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 EPB41P11171 864 aaKnown RBP9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 TRAPPC10P48553 1259 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 NONOQ15233 471 aaKnown RBP eCLIP9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 HHATQ5VTY9 493 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 PHLDB3Q6NSJ2 640 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 ZNF365Q70YC5 407 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 SIRT1Q96EB6 747 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 YIPF3Q9GZM5 350 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 MCM9Q9NXL9 1143 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 TAF6LQ9Y6J9 622 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 UNC13BO14795 1591 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 GNA14O95837 355 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 GCFC2P16383 781 aaKnown RBP9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 CASP1P29466 404 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 CDC25AP30304 524 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 LSP1P33241 339 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 LIFRP42702 1097 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 FXR1P51114 621 aaKnown RBP eCLIP9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 UBE3CQ15386 1083 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 PUM3Q15397 648 aaKnown RBP9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 GBP7Q8N8V2 638 aaPredicted RBP9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 OSBPL9Q96SU4 736 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 LRRC1Q9BTT6 524 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 SLC52A2Q9HAB3 445 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 SLC39A2Q9NP94 309 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 CTTNBP2NLQ9P2B4 639 aa9.96□□□□□ -0.82
CRNKL1-201ENST00000377327 TNKSO95271 1327 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 MDH1P40925 334 aaKnown RBP9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 CCDC62Q6P9F0 684 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 CCDC174Q6PII3 467 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 CEP128Q6ZU80 1094 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 KRT28Q7Z3Y7 464 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 PHLDB2Q86SQ0 1253 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 RPUSD2Q8IZ73 545 aaKnown RBP9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 BLIDQ8IZY5 108 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 MIPOL1Q8TD10 442 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 RUBCNQ92622 972 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 CHP1Q99653 195 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 ELAC2Q9BQ52 826 aaKnown RBP9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 ADD3Q9UEY8 706 aaKnown RBP9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 ESYT3A0FGR9 886 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 ECM2O94769 699 aaPredicted RBP9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 PLCB3Q01970 1234 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 MAP7Q14244 749 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 FOXR1Q6PIV2 292 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 KRT25Q7Z3Z0 450 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 THOC1Q96FV9 657 aaKnown RBP9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 FBXO3Q9UK99 471 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 RAB21Q9UL25 225 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 CCNE1P24864 410 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 SESN3P58005 492 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 SEPT2Q15019 361 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 SH2D4BQ5SQS7 431 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 ANKRD20A3Q5VUR7 823 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 NELFCDQ8IXH7 590 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 MYOCDQ8IZQ8 938 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 SNX29Q8TEQ0 813 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 U2AF1L4Q8WU68 220 aaKnown RBP9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 PBKQ96KB5 322 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 RUNDC3BQ96NL0 473 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 ANKZF1Q9H8Y5 726 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 ZNF652Q9Y2D9 606 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 DAAM1Q9Y4D1 1078 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 ADGRL3Q9HAR2 1447 aa9.95□□□□□ -0.82
CRNKL1-201ENST00000377327 MAP2K7O14733 419 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 STAMBPO95630 424 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 MYL1P05976 194 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 KRT15P19012 456 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 POLE2P56282 527 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 PPP2R2AP63151 447 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 MAN2A1Q16706 1144 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 NAA35Q5VZE5 725 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 SPATA5Q8NB90 893 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 LPIN2Q92539 896 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 PUS7LQ9H0K6 701 aaKnown RBP9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 LARSQ9P2J5 1176 aaKnown RBP9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 CLTCL1P53675 1640 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 KIF3CO14782 793 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 MYCNP04198 464 aaPredicted RBP9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 SCG2P13521 617 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 PPARAQ07869 468 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 NCAPHQ15003 741 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 NBPF10Q6P3W6 841 aaKnown RBP9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 NFRKBQ6P4R8 1299 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 ADAT2Q7Z6V5 191 aaKnown RBP9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 CRACR2BQ8N4Y2 399 aaPredicted RBP9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 MAGEF1Q9HAY2 307 aa9.94□□□□□ -0.82
CRNKL1-201ENST00000377327 SNX12Q9UMY4 172 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms