RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 CNOT6LQ96LI5 555 aaKnown RBP14.47□□□□□ -0.09
USP11-204ENST00000377107 POLD4Q9HCU8 107 aa14.47□□□□□ -0.09
USP11-204ENST00000377107 DUSP10Q9Y6W6 482 aa14.47□□□□□ -0.09
USP11-204ENST00000377107 RBM5P52756 815 aaKnown RBP eCLIP14.47□□□□□ -0.09
USP11-204ENST00000377107 GSTO1P78417 241 aa14.47□□□□□ -0.09
USP11-204ENST00000377107 PPARDQ03181 441 aa14.47□□□□□ -0.09
USP11-204ENST00000377107 UBE2SQ16763 222 aa14.47□□□□□ -0.09
USP11-204ENST00000377107 TDRD12Q587J7 1177 aaKnown RBP14.47□□□□□ -0.09
USP11-204ENST00000377107 ZSCAN29Q8IWY8 852 aaPredicted RBP14.47□□□□□ -0.09
USP11-204ENST00000377107 SMCR8Q8TEV9 937 aaPredicted RBP14.47□□□□□ -0.09
USP11-204ENST00000377107 PYM1Q9BRP8 204 aaKnown RBP14.47□□□□□ -0.09
USP11-204ENST00000377107 LRWD1Q9UFC0 647 aa14.47□□□□□ -0.09
USP11-204ENST00000377107 MYO6Q9UM54 1294 aa14.47□□□□□ -0.09
USP11-204ENST00000377107 LRP6O75581 1613 aa14.47□□□□□ -0.09
USP11-204ENST00000377107 SEMA3EO15041 775 aa14.46□□□□□ -0.09
USP11-204ENST00000377107 RPS6KA4O75676 772 aa14.46□□□□□ -0.09
USP11-204ENST00000377107 PCP11498 1178 aaKnown RBP14.46□□□□□ -0.09
USP11-204ENST00000377107 REXO1Q8N1G1 1221 aaKnown RBP14.46□□□□□ -0.09
USP11-204ENST00000377107 SPATA31A5Q5VU36 1347 aa14.46□□□□□ -0.09
USP11-204ENST00000377107 SPATA31A7Q8IWB4 1347 aa14.46□□□□□ -0.09
USP11-204ENST00000377107 ANKRD40Q6AI12 368 aa14.46□□□□□ -0.09
USP11-204ENST00000377107 GSPT2Q8IYD1 628 aaKnown RBP14.46□□□□□ -0.09
USP11-204ENST00000377107 ELOA2Q8IYF1 753 aaPredicted RBP14.46□□□□□ -0.09
USP11-204ENST00000377107 JAKMIP2Q96AA8 810 aa14.46□□□□□ -0.09
USP11-204ENST00000377107 CCDC42Q96M95 316 aa14.46□□□□□ -0.09
USP11-204ENST00000377107 MXD3Q9BW11 206 aa14.46□□□□□ -0.09
USP11-204ENST00000377107 FAM196BA6NMK8 535 aa14.46□□□□□ -0.1
USP11-204ENST00000377107 AKR1B10O60218 316 aa14.46□□□□□ -0.1
USP11-204ENST00000377107 KRT18P05783 430 aaKnown RBP14.46□□□□□ -0.1
USP11-204ENST00000377107 RASA1P20936 1047 aa14.46□□□□□ -0.1
USP11-204ENST00000377107 SPA17Q15506 151 aa14.46□□□□□ -0.1
USP11-204ENST00000377107 SLC35G1Q2M3R5 365 aa14.46□□□□□ -0.1
USP11-204ENST00000377107 NAALADL2Q58DX5 795 aa14.46□□□□□ -0.1
USP11-204ENST00000377107 C2CD5Q86YS7 1000 aa14.46□□□□□ -0.1
USP11-204ENST00000377107 NELFCDQ8IXH7 590 aa14.46□□□□□ -0.1
USP11-204ENST00000377107 ADSSL1Q8N142 457 aa14.46□□□□□ -0.1
USP11-204ENST00000377107 CRACR2AQ9BSW2 395 aa14.46□□□□□ -0.1
USP11-204ENST00000377107 ZNF287Q9HBT7 754 aa14.46□□□□□ -0.1
USP11-204ENST00000377107 NLRC4Q9NPP4 1024 aa14.46□□□□□ -0.1
USP11-204ENST00000377107 LIMA1Q9UHB6 759 aaKnown RBP14.46□□□□□ -0.1
USP11-204ENST00000377107 STXBP3O00186 592 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 N4BP1O75113 896 aaKnown RBP14.45□□□□□ -0.1
USP11-204ENST00000377107 GNA11P29992 359 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 CXCR5P32302 372 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 RNASE9P60153 205 aaKnown RBP14.45□□□□□ -0.1
USP11-204ENST00000377107 VSNL1P62760 191 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 GPSM2P81274 684 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 GRM4Q14833 912 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 DPP8Q6V1X1 898 aaPredicted RBP14.45□□□□□ -0.1
USP11-204ENST00000377107 NEK8Q86SG6 692 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 BARHL2Q9NY43 387 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 DISP2A7MBM2 1401 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 ZNF185O15231 689 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 TDP2O95551 362 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 TCP10Q12799 353 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 PTPROQ16827 1216 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 DOK7Q18PE1 504 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 ARL6IP4Q66PJ3 421 aaKnown RBP14.45□□□□□ -0.1
USP11-204ENST00000377107 CACNA2D4Q7Z3S7 1137 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 NKRFO15226 690 aaKnown RBP eCLIP14.45□□□□□ -0.1
USP11-204ENST00000377107 CALCRLQ16602 461 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 MEX3CQ5U5Q3 659 aaKnown RBP14.45□□□□□ -0.1
USP11-204ENST00000377107 SNX29Q8TEQ0 813 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 RABEP2Q9H5N1 569 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 GGA1Q9UJY5 639 aa14.45□□□□□ -0.1
USP11-204ENST00000377107 THRAP3Q9Y2W1 955 aaKnown RBP14.45□□□□□ -0.1
USP11-204ENST00000377107 COL4A1P02462 1669 aa14.44□□□□□ -0.1
USP11-204ENST00000377107 ATP1A1P05023 1023 aaKnown RBP14.44□□□□□ -0.1
USP11-204ENST00000377107 PLEKP08567 350 aaPredicted RBP14.44□□□□□ -0.1
USP11-204ENST00000377107 SV2BQ7L1I2 683 aa14.44□□□□□ -0.1
USP11-204ENST00000377107 ITGB4P16144 1822 aa14.44□□□□□ -0.1
USP11-204ENST00000377107 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.44□□□□□ -0.1
USP11-204ENST00000377107 ZRANB2O95218 330 aaKnown RBP eCLIP14.44□□□□□ -0.1
USP11-204ENST00000377107 CYLC1P35663 651 aaPredicted RBP14.44□□□□□ -0.1
USP11-204ENST00000377107 CACNB3P54284 484 aa14.44□□□□□ -0.1
USP11-204ENST00000377107 KCTD1Q719H9 257 aa14.44□□□□□ -0.1
USP11-204ENST00000377107 IRF2BP1Q8IU81 584 aa14.44□□□□□ -0.1
USP11-204ENST00000377107 P2RX5Q93086 422 aa14.44□□□□□ -0.1
USP11-204ENST00000377107 CCDC51Q96ER9 411 aa14.44□□□□□ -0.1
USP11-204ENST00000377107 CD209Q9NNX6 404 aa14.44□□□□□ -0.1
USP11-204ENST00000377107 MYH3P11055 1940 aa14.44□□□□□ -0.1
USP11-204ENST00000377107 LGALS16A8MUM7 142 aa14.44□□□□□ -0.1
USP11-204ENST00000377107 SBK1Q52WX2 424 aa14.44□□□□□ -0.1
USP11-204ENST00000377107 CCDC155Q8N6L0 562 aa14.44□□□□□ -0.1
USP11-204ENST00000377107 KRT86O43790 486 aa14.43□□□□□ -0.1
USP11-204ENST00000377107 SNAP25P60880 206 aa14.43□□□□□ -0.1
USP11-204ENST00000377107 AMPD3Q01432 767 aa14.43□□□□□ -0.1
USP11-204ENST00000377107 TMEM266Q2M3C6 531 aa14.43□□□□□ -0.1
USP11-204ENST00000377107 RSRC2Q7L4I2 434 aaKnown RBP14.43□□□□□ -0.1
USP11-204ENST00000377107 RRAGAQ7L523 313 aa14.43□□□□□ -0.1
USP11-204ENST00000377107 KRT25Q7Z3Z0 450 aa14.43□□□□□ -0.1
USP11-204ENST00000377107 SRCAPQ6ZRS2 3230 aa14.43□□□□□ -0.1
USP11-204ENST00000377107 PBX1P40424 430 aa14.43□□□□□ -0.1
USP11-204ENST00000377107 KIF5AQ12840 1032 aa14.43□□□□□ -0.1
USP11-204ENST00000377107 GRAPQ13588 217 aa14.43□□□□□ -0.1
USP11-204ENST00000377107 CCDC40Q4G0X9 1142 aa14.43□□□□□ -0.1
USP11-204ENST00000377107 TRMT1LQ7Z2T5 733 aaKnown RBP14.43□□□□□ -0.1
USP11-204ENST00000377107 GOLGA6L1Q8N7Z2 621 aa14.43□□□□□ -0.1
USP11-204ENST00000377107 C4orf32Q8N8J7 132 aa14.43□□□□□ -0.1
USP11-204ENST00000377107 GRAPLQ8TC17 118 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms