RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 GPIHBP1Q8IV16 184 aa18.4■□□□□ 0.54
TRIM39-201ENST00000376656 TRIM58Q8NG06 486 aa18.4■□□□□ 0.54
TRIM39-201ENST00000376656 CCDC42Q96M95 316 aa18.4■□□□□ 0.54
TRIM39-201ENST00000376656 MNAT1P51948 309 aa18.4■□□□□ 0.54
TRIM39-201ENST00000376656 EPHB4P54760 987 aa18.4■□□□□ 0.54
TRIM39-201ENST00000376656 KCNB1Q14721 858 aa18.4■□□□□ 0.54
TRIM39-201ENST00000376656 HAUS3Q68CZ6 603 aa18.4■□□□□ 0.54
TRIM39-201ENST00000376656 GIMAP8Q8ND71 665 aaPredicted RBP18.4■□□□□ 0.54
TRIM39-201ENST00000376656 OSBPL9Q96SU4 736 aa18.4■□□□□ 0.54
TRIM39-201ENST00000376656 PLCH1Q4KWH8 1693 aa18.4■□□□□ 0.54
TRIM39-201ENST00000376656 TACC1O75410 805 aa18.39■□□□□ 0.54
TRIM39-201ENST00000376656 EPB41P11171 864 aaKnown RBP18.39■□□□□ 0.54
TRIM39-201ENST00000376656 SCG2P13521 617 aa18.39■□□□□ 0.54
TRIM39-201ENST00000376656 SKOR1P84550 965 aa18.39■□□□□ 0.54
TRIM39-201ENST00000376656 SPA17Q15506 151 aa18.39■□□□□ 0.54
TRIM39-201ENST00000376656 ARL6IP4Q66PJ3 421 aaKnown RBP18.39■□□□□ 0.54
TRIM39-201ENST00000376656 KCTD16Q68DU8 428 aa18.39■□□□□ 0.54
TRIM39-201ENST00000376656 POTEDQ86YR6 584 aa18.39■□□□□ 0.54
TRIM39-201ENST00000376656 RETREG2Q8NC44 543 aa18.39■□□□□ 0.54
TRIM39-201ENST00000376656 CNOT6LQ96LI5 555 aaKnown RBP18.39■□□□□ 0.54
TRIM39-201ENST00000376656 RUFY1Q96T51 708 aa18.39■□□□□ 0.54
TRIM39-201ENST00000376656 TSGA10Q9BZW7 698 aa18.39■□□□□ 0.54
TRIM39-201ENST00000376656 SH2D4AQ9H788 454 aa18.39■□□□□ 0.54
TRIM39-201ENST00000376656 TMOD3Q9NYL9 352 aa18.39■□□□□ 0.54
TRIM39-201ENST00000376656 NDUFAB1O14561 156 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 ATP1A2P50993 1020 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 LRRC15Q8TF66 581 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 NMT2O60551 498 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 HSF2BPO75031 334 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 RHOBTB3O94955 611 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 MIIPQ5JXC2 388 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 TYW1BQ6NUM6 668 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 IQCA1Q86XH1 822 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 RASGRP4Q8TDF6 673 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 ZIM3Q96PE6 472 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 IFIH1Q9BYX4 1025 aaKnown RBP18.39■□□□□ 0.53
TRIM39-201ENST00000376656 STIM2Q9P246 746 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 PCDHA13Q9Y5I0 950 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 FAM205AQ6ZU69 1335 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 DUOX1Q9NRD9 1551 aa18.39■□□□□ 0.53
TRIM39-201ENST00000376656 BAZ2AQ9UIF9 1905 aaKnown RBP18.39■□□□□ 0.53
TRIM39-201ENST00000376656 MAGEB6P1A0A0J9YX57 407 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 NCK2O43639 380 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 CALM1P0DP23 149 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 CALM2P0DP24 149 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 CALM3P0DP25 149 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 MTIF2P46199 727 aaKnown RBP18.38■□□□□ 0.53
TRIM39-201ENST00000376656 EVX2Q03828 476 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 ITIH3Q06033 890 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 DHX37Q8IY37 1157 aaKnown RBP18.38■□□□□ 0.53
TRIM39-201ENST00000376656 CAPN7Q9Y6W3 813 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 ALS2CLQ60I27 953 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 ANKRD40Q6AI12 368 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 EMBQ6PCB8 327 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 ARHGAP20Q9P2F6 1191 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 ABCF2Q9UG63 623 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 LRP5O75197 1615 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 USO1O60763 962 aaKnown RBP18.38■□□□□ 0.53
TRIM39-201ENST00000376656 STARD3NLO95772 234 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 CCDC91Q7Z6B0 441 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 CNPY4Q8N129 248 aa18.38■□□□□ 0.53
TRIM39-201ENST00000376656 NOC4LQ9BVI4 516 aaKnown RBP18.38■□□□□ 0.53
TRIM39-201ENST00000376656 DDAH1O94760 285 aa18.37■□□□□ 0.53
TRIM39-201ENST00000376656 KRT14P02533 472 aa18.37■□□□□ 0.53
TRIM39-201ENST00000376656 NOC3LQ8WTT2 800 aaKnown RBP18.37■□□□□ 0.53
TRIM39-201ENST00000376656 RUBCNQ92622 972 aa18.37■□□□□ 0.53
TRIM39-201ENST00000376656 TMEM60Q9H2L4 133 aa18.37■□□□□ 0.53
TRIM39-201ENST00000376656 DYNLL1P63167 89 aaKnown RBP18.37■□□□□ 0.53
TRIM39-201ENST00000376656 CDK17Q00537 523 aa18.37■□□□□ 0.53
TRIM39-201ENST00000376656 CCDC181Q5TID7 509 aa18.37■□□□□ 0.53
TRIM39-201ENST00000376656 CAVIN3Q969G5 261 aa18.37■□□□□ 0.53
TRIM39-201ENST00000376656 HYOU1Q9Y4L1 999 aa18.37■□□□□ 0.53
TRIM39-201ENST00000376656 MYO1FO00160 1098 aa18.36■□□□□ 0.53
TRIM39-201ENST00000376656 EPHB6O15197 1021 aa18.36■□□□□ 0.53
TRIM39-201ENST00000376656 ZEB2O60315 1214 aa18.36■□□□□ 0.53
TRIM39-201ENST00000376656 PRLRP16471 622 aa18.36■□□□□ 0.53
TRIM39-201ENST00000376656 PFKFB3Q16875 520 aaPredicted RBP18.36■□□□□ 0.53
TRIM39-201ENST00000376656 C2CD5Q86YS7 1000 aa18.36■□□□□ 0.53
TRIM39-201ENST00000376656 P2RX5Q93086 422 aa18.36■□□□□ 0.53
TRIM39-201ENST00000376656 RBM12Q9NTZ6 932 aaKnown RBP18.36■□□□□ 0.53
TRIM39-201ENST00000376656 KBTBD4Q9NVX7 518 aa18.36■□□□□ 0.53
TRIM39-201ENST00000376656 NNTQ13423 1086 aa18.36■□□□□ 0.53
TRIM39-201ENST00000376656 DTHD1Q6ZMT9 781 aa18.36■□□□□ 0.53
TRIM39-201ENST00000376656 DHTKD1Q96HY7 919 aaPredicted RBP18.36■□□□□ 0.53
TRIM39-201ENST00000376656 SALL4Q9UJQ4 1053 aa18.36■□□□□ 0.53
TRIM39-201ENST00000376656 IL2RBP14784 551 aa18.36■□□□□ 0.53
TRIM39-201ENST00000376656 KIF11P52732 1056 aa18.36■□□□□ 0.53
TRIM39-201ENST00000376656 C8orf74Q6P047 294 aa18.36■□□□□ 0.53
TRIM39-201ENST00000376656 ANKRD13CQ8N6S4 541 aa18.36■□□□□ 0.53
TRIM39-201ENST00000376656 PRPF38AQ8NAV1 312 aaKnown RBP18.36■□□□□ 0.53
TRIM39-201ENST00000376656 A0A1W2PQJ5 194 aa18.35■□□□□ 0.53
TRIM39-201ENST00000376656 TCP1P17987 556 aaKnown RBP18.35■□□□□ 0.53
TRIM39-201ENST00000376656 CCNE1P24864 410 aa18.35■□□□□ 0.53
TRIM39-201ENST00000376656 EIF4A3P38919 411 aaKnown RBP18.35■□□□□ 0.53
TRIM39-201ENST00000376656 FNTAP49354 379 aa18.35■□□□□ 0.53
TRIM39-201ENST00000376656 GPKOWQ92917 476 aaPredicted RBP eCLIP18.35■□□□□ 0.53
TRIM39-201ENST00000376656 ERGIC2Q96RQ1 377 aa18.35■□□□□ 0.53
TRIM39-201ENST00000376656 RIOK1Q9BRS2 568 aaKnown RBP18.35■□□□□ 0.53
TRIM39-201ENST00000376656 UBA7P41226 1012 aa18.35■□□□□ 0.53
TRIM39-201ENST00000376656 GSCP56915 257 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms