RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 APBA3O96018 575 aa21.09■□□□□ 0.97
USP49-202ENST00000373010 ADCY7P51828 1080 aa21.09■□□□□ 0.97
USP49-202ENST00000373010 KCNB1Q14721 858 aa21.09■□□□□ 0.97
USP49-202ENST00000373010 HHIPL2Q6UWX4 724 aa21.09■□□□□ 0.97
USP49-202ENST00000373010 AK8Q96MA6 479 aa21.09■□□□□ 0.97
USP49-202ENST00000373010 SWAP70Q9UH65 585 aa21.09■□□□□ 0.97
USP49-202ENST00000373010 LRRC10BA6NIK2 292 aa21.08■□□□□ 0.97
USP49-202ENST00000373010 CACNB3P54284 484 aa21.08■□□□□ 0.97
USP49-202ENST00000373010 ZNF543Q08ER8 600 aa21.08■□□□□ 0.97
USP49-202ENST00000373010 MMTAG2Q9BU76 263 aaKnown RBP21.08■□□□□ 0.97
USP49-202ENST00000373010 JMJD4Q9H9V9 463 aa21.08■□□□□ 0.97
USP49-202ENST00000373010 MYH4Q9Y623 1939 aa21.08■□□□□ 0.96
USP49-202ENST00000373010 MFAP3LO75121 409 aa21.08■□□□□ 0.96
USP49-202ENST00000373010 GYPCP04921 128 aa21.08■□□□□ 0.96
USP49-202ENST00000373010 TXKP42681 527 aa21.08■□□□□ 0.96
USP49-202ENST00000373010 CRKP46108 304 aa21.08■□□□□ 0.96
USP49-202ENST00000373010 FXR1P51114 621 aaKnown RBP eCLIP21.08■□□□□ 0.96
USP49-202ENST00000373010 ELF2Q15723 593 aa21.08■□□□□ 0.96
USP49-202ENST00000373010 IRF2BP1Q8IU81 584 aa21.08■□□□□ 0.96
USP49-202ENST00000373010 ADGRF4Q8IZF3 695 aa21.08■□□□□ 0.96
USP49-202ENST00000373010 TMX4Q9H1E5 349 aaPredicted RBP21.08■□□□□ 0.96
USP49-202ENST00000373010 EDIL3O43854 480 aa21.07■□□□□ 0.96
USP49-202ENST00000373010 PPP1R11O60927 126 aaPredicted RBP21.07■□□□□ 0.96
USP49-202ENST00000373010 RHOBTB3O94955 611 aa21.07■□□□□ 0.96
USP49-202ENST00000373010 SLC16A2P36021 539 aa21.07■□□□□ 0.96
USP49-202ENST00000373010 SPAG1Q07617 926 aa21.07■□□□□ 0.96
USP49-202ENST00000373010 RAD9BQ6WBX8 426 aa21.07■□□□□ 0.96
USP49-202ENST00000373010 hCG_1984214I3L0E3 225 aa21.07■□□□□ 0.96
USP49-202ENST00000373010 HLA-DOAP06340 250 aa21.07■□□□□ 0.96
USP49-202ENST00000373010 ZNF713Q8N859 430 aaPredicted RBP21.07■□□□□ 0.96
USP49-202ENST00000373010 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.07■□□□□ 0.96
USP49-202ENST00000373010 FAM196BA6NMK8 535 aa21.06■□□□□ 0.96
USP49-202ENST00000373010 H7C1D1 291 aa21.06■□□□□ 0.96
USP49-202ENST00000373010 SLC37A4O43826 429 aa21.06■□□□□ 0.96
USP49-202ENST00000373010 TDP2O95551 362 aa21.06■□□□□ 0.96
USP49-202ENST00000373010 MYL1P05976 194 aa21.06■□□□□ 0.96
USP49-202ENST00000373010 CCDC96Q2M329 555 aa21.06■□□□□ 0.96
USP49-202ENST00000373010 KIAA0825Q8IV33 1275 aa21.06■□□□□ 0.96
USP49-202ENST00000373010 GIMAP8Q8ND71 665 aaPredicted RBP21.06■□□□□ 0.96
USP49-202ENST00000373010 ANKRD20A12PQ8NF67 263 aa21.06■□□□□ 0.96
USP49-202ENST00000373010 ZNF219Q9P2Y4 722 aaPredicted RBP21.06■□□□□ 0.96
USP49-202ENST00000373010 ITIH6Q6UXX5 1313 aa21.06■□□□□ 0.96
USP49-202ENST00000373010 RNF225M0QZC1 329 aaPredicted RBP21.06■□□□□ 0.96
USP49-202ENST00000373010 TCP10Q12799 353 aa21.06■□□□□ 0.96
USP49-202ENST00000373010 UBE2SQ16763 222 aa21.06■□□□□ 0.96
USP49-202ENST00000373010 SHROOM1Q2M3G4 852 aaPredicted RBP21.06■□□□□ 0.96
USP49-202ENST00000373010 KCTD1Q719H9 257 aa21.06■□□□□ 0.96
USP49-202ENST00000373010 WDR24Q96S15 920 aa21.06■□□□□ 0.96
USP49-202ENST00000373010 CUEDC2Q9H467 287 aa21.06■□□□□ 0.96
USP49-202ENST00000373010 MRPL44Q9H9J2 332 aaKnown RBP21.06■□□□□ 0.96
USP49-202ENST00000373010 PNMA6FA0A0J9YX94 578 aa21.05■□□□□ 0.96
USP49-202ENST00000373010 PLSCR1O15162 318 aa21.05■□□□□ 0.96
USP49-202ENST00000373010 PRKCSHP14314 528 aaPredicted RBP21.05■□□□□ 0.96
USP49-202ENST00000373010 GNG11P61952 73 aa21.05■□□□□ 0.96
USP49-202ENST00000373010 CALCRLQ16602 461 aa21.05■□□□□ 0.96
USP49-202ENST00000373010 MTMR9Q96QG7 549 aa21.05■□□□□ 0.96
USP49-202ENST00000373010 TRIM9Q9C026 710 aa21.05■□□□□ 0.96
USP49-202ENST00000373010 DNAJC18Q9H819 358 aa21.05■□□□□ 0.96
USP49-202ENST00000373010 CGNQ9P2M7 1197 aaKnown RBP21.05■□□□□ 0.96
USP49-202ENST00000373010 MYO3BQ8WXR4 1341 aa21.05■□□□□ 0.96
USP49-202ENST00000373010 GREB1LQ9C091 1923 aaPredicted RBP21.05■□□□□ 0.96
USP49-202ENST00000373010 URI1O94763 535 aaPredicted RBP21.05■□□□□ 0.96
USP49-202ENST00000373010 GOLGA6L9A6NEM1 432 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 USP17L10C9JJH3 530 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 TNNI2P48788 182 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 ASIC1P78348 528 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 C2CD5Q86YS7 1000 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 MAGEF1Q9HAY2 307 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 SCN9AQ15858 1988 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 A0A0U1RQJ8 604 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 PSMA7O14818 248 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 HMGB2P26583 209 aaKnown RBP21.04■□□□□ 0.96
USP49-202ENST00000373010 PDE4DQ08499 809 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 STIM1Q13586 685 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 PODNQ7Z5L7 613 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 CNGA4Q8IV77 575 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 ATRIPQ8WXE1 791 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 TRIM47Q96LD4 638 aa21.04■□□□□ 0.96
USP49-202ENST00000373010 NAA15Q9BXJ9 866 aaKnown RBP21.04■□□□□ 0.96
USP49-202ENST00000373010 SRRTQ9BXP5 876 aaKnown RBP21.04■□□□□ 0.96
USP49-202ENST00000373010 RAD21O60216 631 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 RBM5P52756 815 aaKnown RBP eCLIP21.03■□□□□ 0.96
USP49-202ENST00000373010 UBXN1Q04323 297 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 ORC2Q13416 577 aaPredicted RBP21.03■□□□□ 0.96
USP49-202ENST00000373010 ERCC6LQ2NKX8 1250 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 ZDHHC15Q96MV8 337 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 C7orf25Q9BPX7 421 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 RIC8AQ9NPQ8 531 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 ADGRG1Q9Y653 693 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 SIPA1L1O43166 1804 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 SPDYE4A6NLX3 237 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 CCDC175P0C221 793 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 STK4Q13043 487 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 GRB10Q13322 594 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 GLIPR1L2Q4G1C9 344 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 TTI2Q6NXR4 508 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 CALML4Q96GE6 196 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 EXOC1Q9NV70 894 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 LRWD1Q9UFC0 647 aa21.03■□□□□ 0.96
USP49-202ENST00000373010 DDTLA6NHG4 134 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms