RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 NOVP48745 357 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 HAND2P61296 217 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 IMMTQ16891 758 aaKnown RBP12.03□□□□□ -0.48
COL5A1-202ENST00000371820 RNF20Q5VTR2 975 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 RCSD1Q6JBY9 416 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 CAVIN1Q6NZI2 390 aaKnown RBP12.03□□□□□ -0.48
COL5A1-202ENST00000371820 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.03□□□□□ -0.48
COL5A1-202ENST00000371820 IQCA1Q86XH1 822 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 GAS2L3Q86XJ1 694 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 CPXCR1Q8N123 301 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 CHST13Q8NET6 341 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 DCAF4Q8WV16 495 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 MAML3Q96JK9 1138 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 PANK2Q9BZ23 570 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 SENP6Q9GZR1 1112 aaPredicted RBP12.03□□□□□ -0.48
COL5A1-202ENST00000371820 SLC38A10Q9HBR0 1119 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 IL17RBQ9NRM6 502 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 NRBP1Q9UHY1 535 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 MDM2Q00987 491 aaPredicted RBP12.02□□□□□ -0.49
COL5A1-202ENST00000371820 CCDC96Q2M329 555 aa12.02□□□□□ -0.49
COL5A1-202ENST00000371820 TKFCQ3LXA3 575 aa12.02□□□□□ -0.49
COL5A1-202ENST00000371820 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.02□□□□□ -0.49
COL5A1-202ENST00000371820 MSL3Q8N5Y2 521 aaKnown RBP12.02□□□□□ -0.49
COL5A1-202ENST00000371820 DEFB123Q8N688 67 aa12.02□□□□□ -0.49
COL5A1-202ENST00000371820 TMEM87AQ8NBN3 555 aa12.02□□□□□ -0.49
COL5A1-202ENST00000371820 DDX11Q96FC9 970 aa12.02□□□□□ -0.49
COL5A1-202ENST00000371820 ALDH8A1Q9H2A2 487 aaPredicted RBP12.02□□□□□ -0.49
COL5A1-202ENST00000371820 PNMA2Q9UL42 364 aa12.02□□□□□ -0.49
COL5A1-202ENST00000371820 COL6A3P12111 3177 aa12.02□□□□□ -0.49
COL5A1-202ENST00000371820 SEPT4O43236 478 aa12.01□□□□□ -0.49
COL5A1-202ENST00000371820 TPM3P06753 285 aa12.01□□□□□ -0.49
COL5A1-202ENST00000371820 PDCP20941 246 aa12.01□□□□□ -0.49
COL5A1-202ENST00000371820 ATN1P54259 1190 aaPredicted RBP12.01□□□□□ -0.49
COL5A1-202ENST00000371820 Q7L0L9 218 aa12.01□□□□□ -0.49
COL5A1-202ENST00000371820 KCNB2Q92953 911 aa12.01□□□□□ -0.49
COL5A1-202ENST00000371820 PDLIM2Q96JY6 352 aa12.01□□□□□ -0.49
COL5A1-202ENST00000371820 NAP1L5Q96NT1 182 aaPredicted RBP12.01□□□□□ -0.49
COL5A1-202ENST00000371820 KRT23Q9C075 422 aa12.01□□□□□ -0.49
COL5A1-202ENST00000371820 CNNM2Q9H8M5 875 aa12.01□□□□□ -0.49
COL5A1-202ENST00000371820 RAVER2Q9HCJ3 691 aaKnown RBP12.01□□□□□ -0.49
COL5A1-202ENST00000371820 INCENPQ9NQS7 918 aa12.01□□□□□ -0.49
COL5A1-202ENST00000371820 DNAH12Q6ZR08 3092 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 NMT2O60551 498 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 RTP1P59025 263 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 ZNF792Q3KQV3 632 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 GJC2Q5T442 439 aaPredicted RBP12□□□□□ -0.49
COL5A1-202ENST00000371820 KCTD1Q719H9 257 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 ZNF467Q7Z7K2 595 aaPredicted RBP12□□□□□ -0.49
COL5A1-202ENST00000371820 DGKHQ86XP1 1220 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 TBC1D10CQ8IV04 446 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 ANKRD35Q8N283 1001 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 ARRDC4Q8NCT1 418 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 SLC17A8Q8NDX2 589 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 TMEM47Q9BQJ4 181 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 TINF2Q9BSI4 451 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 TSPY26PQ9H489 355 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 ACAD9Q9H845 621 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 NOL7Q9UMY1 257 aaKnown RBP12□□□□□ -0.49
COL5A1-202ENST00000371820 SMC3Q9UQE7 1217 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 MTMR7Q9Y216 660 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 CNPY2Q9Y2B0 182 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 ZDHHC9Q9Y397 364 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 PLXNA1Q9UIW2 1896 aa12□□□□□ -0.49
COL5A1-202ENST00000371820 KBTBD13C9JR72 458 aa11.99□□□□□ -0.49
COL5A1-202ENST00000371820 ZNF500O60304 480 aaPredicted RBP11.99□□□□□ -0.49
COL5A1-202ENST00000371820 PGK2P07205 417 aa11.99□□□□□ -0.49
COL5A1-202ENST00000371820 SNX17Q15036 470 aa11.99□□□□□ -0.49
COL5A1-202ENST00000371820 ANO1Q5XXA6 986 aa11.99□□□□□ -0.49
COL5A1-202ENST00000371820 LBHD1Q9BQE6 289 aaPredicted RBP11.99□□□□□ -0.49
COL5A1-202ENST00000371820 MTMR10Q9NXD2 777 aa11.99□□□□□ -0.49
COL5A1-202ENST00000371820 PRR12Q9ULL5 1215 aa11.99□□□□□ -0.49
COL5A1-202ENST00000371820 STXBP5LQ9Y2K9 1186 aa11.99□□□□□ -0.49
COL5A1-202ENST00000371820 RIPK3Q9Y572 518 aa11.99□□□□□ -0.49
COL5A1-202ENST00000371820 CYP46A1Q9Y6A2 500 aa11.99□□□□□ -0.49
COL5A1-202ENST00000371820 TACC3Q9Y6A5 838 aa11.99□□□□□ -0.49
COL5A1-202ENST00000371820 SYNGAP1Q96PV0 1343 aa11.99□□□□□ -0.49
COL5A1-202ENST00000371820 ZNFX1Q9P2E3 1918 aaKnown RBP11.99□□□□□ -0.49
COL5A1-202ENST00000371820 NEDD4P46934 1319 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 DNAJC25-GNG10A0A024R161 153 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 RARBP10826 455 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 AKR1A1P14550 325 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 UBE2HP62256 183 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 TRDNQ13061 729 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 KRT32Q14532 448 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 LRRC41Q15345 812 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 PRAMEF19Q5SWL8 479 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 GPATCH4Q5T3I0 446 aaKnown RBP11.98□□□□□ -0.49
COL5A1-202ENST00000371820 SYDE2Q5VT97 1194 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 BTNL9Q6UXG8 535 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 SLC39A5Q6ZMH5 540 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 UBAC1Q9BSL1 405 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 KAT14Q9H8E8 782 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 RNF146Q9NTX7 359 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 PRKAG2Q9UGJ0 569 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 CCPG1Q9ULG6 757 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 ATP11BQ9Y2G3 1177 aa11.98□□□□□ -0.49
COL5A1-202ENST00000371820 U3KPZ7 1027 aaPredicted RBP11.98□□□□□ -0.49
COL5A1-202ENST00000371820 B4E1Z4 1266 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 RRP9O43818 475 aaKnown RBP11.97□□□□□ -0.49
COL5A1-202ENST00000371820 KDM4AO75164 1064 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms