RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 DEXIO95424 95 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 RPN1P04843 607 aaKnown RBP13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 MYBP10242 640 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 PPP2R5AQ15172 486 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 SEC23AQ15436 765 aa13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 ASTE1Q2TB18 679 aaPredicted RBP13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 NAIF1Q69YI7 327 aaPredicted RBP13.01□□□□□ -0.33
SMARCA1-201ENST00000371121 MYH7BA7E2Y1 1941 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 MYH4Q9Y623 1939 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 FRMD3A2A2Y4 597 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 IFIT3O14879 490 aaKnown RBP13□□□□□ -0.33
SMARCA1-201ENST00000371121 MGRN1O60291 552 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 PDE6AP16499 860 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 PARP9Q8IXQ6 854 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 CAGE1Q8TC20 777 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 CWC25Q9NXE8 425 aaPredicted RBP13□□□□□ -0.33
SMARCA1-201ENST00000371121 RIPOR2Q9Y4F9 1068 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 USP8P40818 1118 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 IFNL3Q8IZI9 196 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 OR2W6PQ8NHA6 318 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 TBC1D22AQ8WUA7 517 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 NEUROG2Q9H2A3 272 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 SLC24A3Q9HC58 644 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 COL4A1P02462 1669 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 TRIM75PA6NK02 468 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 F8W031 263 aaPredicted RBP13□□□□□ -0.33
SMARCA1-201ENST00000371121 OPA1O60313 960 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 GRIK3Q13003 919 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 FANCBQ8NB91 859 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 MAGEC3Q8TD91 643 aa13□□□□□ -0.33
SMARCA1-201ENST00000371121 TRAPPC3O43617 180 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 PLEKHA8P1O95397 391 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 PCCAP05165 728 aaPredicted RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 ZBTB48P10074 688 aaPredicted RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 TMOD1P28289 359 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 HNRNPH3P31942 346 aaKnown RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 ALX1Q15699 326 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 RTN1Q16799 776 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 ATP6V1G3Q96LB4 118 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 LRP5O75197 1615 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 DUOX1Q9NRD9 1551 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 CDK17Q00537 523 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 XRCC4Q13426 336 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 KIAA1328Q86T90 577 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 C1orf131Q8NDD1 294 aaKnown RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 CCT6BQ92526 530 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 LPIN2Q92539 896 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 VEZTQ9HBM0 779 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 KCNMB3Q9NPA1 279 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 RREB1Q92766 1687 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 SLIT2O94813 1529 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 C5orf60A6NFR6 353 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 PP2D1A8MPX8 630 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 PPP1R12AO14974 1030 aaPredicted RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 GTPBP6O43824 516 aaPredicted RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 FLT3P36888 993 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 KRT83P78385 493 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 EVX2Q03828 476 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 UBE3CQ15386 1083 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 SPATS2Q86XZ4 545 aaKnown RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 ZSCAN29Q8IWY8 852 aaPredicted RBP12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 TEX11Q8IYF3 940 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 CCDC170Q8IYT3 715 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 TMBIM4Q9HC24 238 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 PCDHA13Q9Y5I0 950 aa12.99□□□□□ -0.33
SMARCA1-201ENST00000371121 SHANK3Q9BYB0 1731 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 H7C1D1 291 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 SCTRP47872 440 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 GUCY2FP51841 1108 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 FAM69CQ0P6D2 419 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 CEP85LQ5SZL2 805 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 KCNH5Q8NCM2 988 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 ZBTB3Q9H5J0 574 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 E2F5Q15329 346 aa12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 CICQ96RK0 1608 aaPredicted RBP12.98□□□□□ -0.33
SMARCA1-201ENST00000371121 HSF2BPO75031 334 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 ZPR1O75312 459 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 SSBP05455 408 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 CSF1RP07333 972 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 PHKA1P46020 1223 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 AKNAD1Q5T1N1 836 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 ZNF654Q8IZM8 581 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 ANKRD13CQ8N6S4 541 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 FERMT2Q96AC1 680 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 MTFR1LQ9H019 292 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 CEP131Q9UPN4 1083 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 SIK3Q9Y2K2 1263 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 ATAD5Q96QE3 1844 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 E7EVH7 732 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 H0YHG0 523 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 PPP1R12BO60237 982 aaPredicted RBP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 ZBED6P86452 979 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 CRYMQ14894 314 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 SAFBQ15424 915 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 LACTB2Q53H82 288 aaPredicted RBP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 RNF187Q5TA31 235 aaPredicted RBP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 HGSNATQ68CP4 663 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms